| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is 119900161
Identifier: 119900161
GI number: 119900161
Start: 4244062
End: 4244643
Strand: Direct
Name: 119900161
Synonym: azo3872
Alternate gene names: NA
Gene position: 4244062-4244643 (Clockwise)
Preceding gene: 119900160
Following gene: 119900162
Centisome position: 96.98
GC content: 68.21
Gene sequence:
>582_bases ATGAGCAACACAAGCCCGCGCGCCCCGATGCGCGTCGTCGAAAAACGCATCACGCTGAGCCGCCGCGGCTTCCTGAAGGG CGGCGGCATGGCCGCCCTCGGCGTGGGTGCGCTGTCCACCGCCACCCTGATGACCCCGGCGCGCGAGGCGCTGGCGGCCA ACTTCAAGGTGCTCGGCGCCGCCACCGGCAAGACCCTGCTGGTGCTGGCGCGCGACATCTTCCCGCACGACCGCATCTCC GACCGCTACTACCTGCAGGCGCTCGAACCGCTGGAAGCGCAGGCCGCCAAGGACGACAAGCTGAAGGCCCTGCTGACCGA GGGCACGGCCGCGCTCGACCGCCTGGCCAAGCTGCGCTTCAAGAAGGCCTACGCCGACCTCGCCAAGGAGACCGACCGCC TCAGCCTGCTCTACGTGATCGAGCACGGCGCCTTCTTCCAGAAGGTGAAGGGCCACCTCGTCACCGGCTTCTACGACAAC AAGGCGGTGTGGCCGCTGTTCGGCTACGAGGGTTCGTCCTGGGAAAAGGGCGGCTACATCAACCGCGGCTTCGACGACAT CGACTGGCTGGACGGCGCCTGA
Upstream 100 bases:
>100_bases TGCTCGGCGAGCTGGAGGAGGACGACCGCGCCTGAACACCGCACCCCCGATCCCGCAGCGAGAAAGGCCCCCCGGCCGCC ATAACACCAAGGAGACAACC
Downstream 100 bases:
>100_bases GCGCCACGCCAGCGGGCAGCCGCCGACCGCCCCCGACCTGAAGGGCATCGGCCTGCCGCACCCATAAAACGACATAACGG AGACAAAGCATGAGCGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Tat Pathway Signal Sequence Domain-Containing Protein; Signal Peptide; Twin-Arginine Translocation Pathway Signal Peptide
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MSNTSPRAPMRVVEKRITLSRRGFLKGGGMAALGVGALSTATLMTPAREALAANFKVLGAATGKTLLVLARDIFPHDRIS DRYYLQALEPLEAQAAKDDKLKALLTEGTAALDRLAKLRFKKAYADLAKETDRLSLLYVIEHGAFFQKVKGHLVTGFYDN KAVWPLFGYEGSSWEKGGYINRGFDDIDWLDGA
Sequences:
>Translated_193_residues MSNTSPRAPMRVVEKRITLSRRGFLKGGGMAALGVGALSTATLMTPAREALAANFKVLGAATGKTLLVLARDIFPHDRIS DRYYLQALEPLEAQAAKDDKLKALLTEGTAALDRLAKLRFKKAYADLAKETDRLSLLYVIEHGAFFQKVKGHLVTGFYDN KAVWPLFGYEGSSWEKGGYINRGFDDIDWLDGA >Mature_192_residues SNTSPRAPMRVVEKRITLSRRGFLKGGGMAALGVGALSTATLMTPAREALAANFKVLGAATGKTLLVLARDIFPHDRISD RYYLQALEPLEAQAAKDDKLKALLTEGTAALDRLAKLRFKKAYADLAKETDRLSLLYVIEHGAFFQKVKGHLVTGFYDNK AVWPLFGYEGSSWEKGGYINRGFDDIDWLDGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21212; Mature: 21080
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTSPRAPMRVVEKRITLSRRGFLKGGGMAALGVGALSTATLMTPAREALAANFKVLGA CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEC ATGKTLLVLARDIFPHDRISDRYYLQALEPLEAQAAKDDKLKALLTEGTAALDRLAKLRF CCCCEEEEEEHHHCCCCCCCCHHHHHHHCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH KKAYADLAKETDRLSLLYVIEHGAFFQKVKGHLVTGFYDNKAVWPLFGYEGSSWEKGGYI HHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCCCC NRGFDDIDWLDGA CCCCCCCCCCCCC >Mature Secondary Structure SNTSPRAPMRVVEKRITLSRRGFLKGGGMAALGVGALSTATLMTPAREALAANFKVLGA CCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEC ATGKTLLVLARDIFPHDRISDRYYLQALEPLEAQAAKDDKLKALLTEGTAALDRLAKLRF CCCCEEEEEEHHHCCCCCCCCHHHHHHHCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH KKAYADLAKETDRLSLLYVIEHGAFFQKVKGHLVTGFYDNKAVWPLFGYEGSSWEKGGYI HHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCCCC NRGFDDIDWLDGA CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA