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The map label for this gene is ykcC [H]

Identifier: 119899883

GI number: 119899883

Start: 3944541

End: 3945566

Strand: Reverse

Name: ykcC [H]

Synonym: azo3594

Alternate gene names: 119899883

Gene position: 3945566-3944541 (Counterclockwise)

Preceding gene: 119899884

Following gene: 119899882

Centisome position: 90.16

GC content: 61.11

Gene sequence:

>1026_bases
ATGACGTTTTTTCCGGTGTTCCTGTCAGTCGTGCTTGTTGTGCGTAACGAGTCCGCGCGGCTTGAAGACATCCTGGCGTC
TGCGGTAGGCAGCGTTTCGCCGCTCGTGAGCGATTACGAAATCGTCGTGGTCGATAACGCATCCTCTGATGACAGCGTGA
CGAGGCTGAAGCGCCTGACCGGCGAGGATGGGCTGCCAAACCTGCAGGTCTATGCCCTGACCAAGGAGGTCGATACGGAT
ACGGCTTCATGGGTGGGGCTGGAAAATGCACTCGGTGATTTCGTCGCGGTGATCGACCCTCTTGCCGATGACATCGCCTT
TCTGCCGCAGATGCTCGACAAGGCGGTTTCGGGAGCCGATGTCGTCTTCGCGACCAACCAGCAAAGGCCGCCGCAGTCGC
TGGCATACAATCTTGCGTACCTGGCGTTCAACCGCCTCTACAAGTTCTTCAACGGCATTCACCTTGCCAAAGAGGCGCCG
CAGTACCGATTGCTGAGCAAACGGGTCATCAACTTCATCCTGCAACACCCGCAGCCGTCGATCACCTACCGCCATCTGCC
CGCCACAGGTGGGTTTGCCCGCGTTAATCTGGAATACAGCGCACCGCCGCGCGCGCGCGCCACCAAACGTCTTGGCGAAA
GCATCGGCCGTGGCACACGGCTGCTCGTGTCGACCACTCGCGCGCCCATGCGTCTGGTCACCGCGTTGTCGCTCTTCGGT
GCGGTCGCCAATGTGCTCTATTCCATCTATGTGCTAGCGGTCGCGCTGCTGAGTCCGGACGTCGCCCCGGGCTGGGCGAG
CCTGTCGCTGCAGCAATCGGGGATGTTCTTCCTGATCTCGCTGGTCCTGCTGGTGCTGGGCGAGTACATCCTGCACATGG
CGAGTCTGTCGACCGAGGGCCCGCCCTACCATGTCGCGCAGGAATTCACCAGCGCGCGGCTAACGCGGCGCGAAAAGCTG
AATATCGAGGATGTATCGTCGGTTCGCGCAGTGTCGGTCTTGGCTGGCGTGGAACGCGTCGCGTGA

Upstream 100 bases:

>100_bases
CAGGCTGGACAATCCGACCCGTGGTGAAAGGTCGCATGTCGCACTGCGGTAGAATATGCGGACAAGAAGCAACGGCCGCG
GACGTGCGGAGGGAGGGGTC

Downstream 100 bases:

>100_bases
CGGCTGCCGGGATGCCCATGTTCGACGCAATTGTCGTCGGGGGCGGATTTTACGGCTCGGCGATTGCCATCTACCTCGCC
CAGCAGCGTCGTTTCGGCCG

Product: glycosyltransferase

Products: GDP; dolichyl D-mannosyl phosphate

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MTFFPVFLSVVLVVRNESARLEDILASAVGSVSPLVSDYEIVVVDNASSDDSVTRLKRLTGEDGLPNLQVYALTKEVDTD
TASWVGLENALGDFVAVIDPLADDIAFLPQMLDKAVSGADVVFATNQQRPPQSLAYNLAYLAFNRLYKFFNGIHLAKEAP
QYRLLSKRVINFILQHPQPSITYRHLPATGGFARVNLEYSAPPRARATKRLGESIGRGTRLLVSTTRAPMRLVTALSLFG
AVANVLYSIYVLAVALLSPDVAPGWASLSLQQSGMFFLISLVLLVLGEYILHMASLSTEGPPYHVAQEFTSARLTRREKL
NIEDVSSVRAVSVLAGVERVA

Sequences:

>Translated_341_residues
MTFFPVFLSVVLVVRNESARLEDILASAVGSVSPLVSDYEIVVVDNASSDDSVTRLKRLTGEDGLPNLQVYALTKEVDTD
TASWVGLENALGDFVAVIDPLADDIAFLPQMLDKAVSGADVVFATNQQRPPQSLAYNLAYLAFNRLYKFFNGIHLAKEAP
QYRLLSKRVINFILQHPQPSITYRHLPATGGFARVNLEYSAPPRARATKRLGESIGRGTRLLVSTTRAPMRLVTALSLFG
AVANVLYSIYVLAVALLSPDVAPGWASLSLQQSGMFFLISLVLLVLGEYILHMASLSTEGPPYHVAQEFTSARLTRREKL
NIEDVSSVRAVSVLAGVERVA
>Mature_340_residues
TFFPVFLSVVLVVRNESARLEDILASAVGSVSPLVSDYEIVVVDNASSDDSVTRLKRLTGEDGLPNLQVYALTKEVDTDT
ASWVGLENALGDFVAVIDPLADDIAFLPQMLDKAVSGADVVFATNQQRPPQSLAYNLAYLAFNRLYKFFNGIHLAKEAPQ
YRLLSKRVINFILQHPQPSITYRHLPATGGFARVNLEYSAPPRARATKRLGESIGRGTRLLVSTTRAPMRLVTALSLFGA
VANVLYSIYVLAVALLSPDVAPGWASLSLQQSGMFFLISLVLLVLGEYILHMASLSTEGPPYHVAQEFTSARLTRREKLN
IEDVSSVRAVSVLAGVERVA

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788588, Length=320, Percent_Identity=25.9375, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1788692, Length=312, Percent_Identity=23.7179487179487, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.83

Molecular weight: Translated: 37209; Mature: 37078

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFFPVFLSVVLVVRNESARLEDILASAVGSVSPLVSDYEIVVVDNASSDDSVTRLKRLT
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHC
GEDGLPNLQVYALTKEVDTDTASWVGLENALGDFVAVIDPLADDIAFLPQMLDKAVSGAD
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VVFATNQQRPPQSLAYNLAYLAFNRLYKFFNGIHLAKEAPQYRLLSKRVINFILQHPQPS
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHCCCCC
ITYRHLPATGGFARVNLEYSAPPRARATKRLGESIGRGTRLLVSTTRAPMRLVTALSLFG
CEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH
AVANVLYSIYVLAVALLSPDVAPGWASLSLQQSGMFFLISLVLLVLGEYILHMASLSTEG
HHHHHHHHHHHHHHHHHCCCCCCCCHHCEEHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PPYHVAQEFTSARLTRREKLNIEDVSSVRAVSVLAGVERVA
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TFFPVFLSVVLVVRNESARLEDILASAVGSVSPLVSDYEIVVVDNASSDDSVTRLKRLT
CHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHC
GEDGLPNLQVYALTKEVDTDTASWVGLENALGDFVAVIDPLADDIAFLPQMLDKAVSGAD
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VVFATNQQRPPQSLAYNLAYLAFNRLYKFFNGIHLAKEAPQYRLLSKRVINFILQHPQPS
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHCCCCC
ITYRHLPATGGFARVNLEYSAPPRARATKRLGESIGRGTRLLVSTTRAPMRLVTALSLFG
CEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH
AVANVLYSIYVLAVALLSPDVAPGWASLSLQQSGMFFLISLVLLVLGEYILHMASLSTEG
HHHHHHHHHHHHHHHHHCCCCCCCCHHCEEHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PPYHVAQEFTSARLTRREKLNIEDVSSVRAVSVLAGVERVA
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GDPmannose; dolichyl phosphate

Specific reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]