| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is 119899880
Identifier: 119899880
GI number: 119899880
Start: 3941775
End: 3942605
Strand: Reverse
Name: 119899880
Synonym: azo3591
Alternate gene names: NA
Gene position: 3942605-3941775 (Counterclockwise)
Preceding gene: 119899881
Following gene: 119899879
Centisome position: 90.1
GC content: 68.47
Gene sequence:
>831_bases GTGAGACTGTCGATCTCGAACATCGCCTGGGATGCGGAGGAGGATGCGGCGGTGGCGGCACTGCTCGCGCGCCATGCAGT GGATGCGGTGGATGTTGCGCCGGGCAAGTATTTCCCGCGCCCGCAGCAGGCAACGGACGCGGAGGTGGCGGAGGTGCGCC GGTGGTGGGCCAGTCGGGGCATCGAAATCACGGGGATGCAGGCCTTGCTGTTCGGTACCACCGGTCTCAACGTCTTCGGT CCCGCCGACGTGCAGCGGGCCATGCTTGCGCACCTCGACGCCGTATGCCGCATCGGCGGCGGCCTGGGGGCGAAGTGCCT GGTGTTTGGTTCGCCGAAGAACCGGGACCGGGCGGCGCTCGACGACAGTCGCGTCCTGGACGTGGCATGCGGGTTTTTCT CCCGTCTGGGTGATGTTGCTGCGCGCCACGGCGTGGTGGTATGCCTTGAGCCGAACCCGGTGGCCTACGGTGCGAATTTC ATGACGACCAGCGCGGAGACGGCTGCGGTTGTGCGGGCGGTGGGCCATCCCGCAATAAGGATGCAGCTCGACATCGGCGC CCTCGCTATGAACGGCGAGGACATCGGTGAGGTCGCGGCCGCCCATGGCGACCTGATCGCCCACATCCATGCGAGCGAGC CCGGGCTGAAAACCCTGGGTGACGGCGGGAGCGACCATGCTCGGGCGGCGGCCGTGCTGGCGGACGGGCGCGTGGGCAAG CTGGTATGCATCGAGATGCTGGCCGCGAACGACGAGCCGCACCTCGCTGCGATCGAGCGTGCGCTGCTCGCTGCCGACGC GACCTATCGGGTGGCGGAGCGCGGTGCATGA
Upstream 100 bases:
>100_bases GCGGACAGGGCGCCTATCAGTACAGCGTGCGTGAAACGCTGTCGGCCGTGCGCGCCTATGCTCAGTCCGAGCCGCGCGCG GTGAAGGTGGAGGCCGCAAA
Downstream 100 bases:
>100_bases AGTGGTTGATTCTCGTTCTGGGCATCCTCAGCAACGCTTCCGCCAGCGTGCTGGTGAAGTACGCCATGCTGCCGCCGCGA CGGTTTCCCTCGCTCGCTGA
Product: sugar or sugar nucleotide oxidoreductase
Products: NA
Alternate protein names: Xylose Isomerase Domain-Containing Protein; Sugar Or Sugar Nucleotide Oxidoreductase; Nitrogen-Fixing NifU C-Terminal; Xylose Isomerase; Xylose Isomerase Domain-Containing Protein Tim Barrel
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MRLSISNIAWDAEEDAAVAALLARHAVDAVDVAPGKYFPRPQQATDAEVAEVRRWWASRGIEITGMQALLFGTTGLNVFG PADVQRAMLAHLDAVCRIGGGLGAKCLVFGSPKNRDRAALDDSRVLDVACGFFSRLGDVAARHGVVVCLEPNPVAYGANF MTTSAETAAVVRAVGHPAIRMQLDIGALAMNGEDIGEVAAAHGDLIAHIHASEPGLKTLGDGGSDHARAAAVLADGRVGK LVCIEMLAANDEPHLAAIERALLAADATYRVAERGA
Sequences:
>Translated_276_residues MRLSISNIAWDAEEDAAVAALLARHAVDAVDVAPGKYFPRPQQATDAEVAEVRRWWASRGIEITGMQALLFGTTGLNVFG PADVQRAMLAHLDAVCRIGGGLGAKCLVFGSPKNRDRAALDDSRVLDVACGFFSRLGDVAARHGVVVCLEPNPVAYGANF MTTSAETAAVVRAVGHPAIRMQLDIGALAMNGEDIGEVAAAHGDLIAHIHASEPGLKTLGDGGSDHARAAAVLADGRVGK LVCIEMLAANDEPHLAAIERALLAADATYRVAERGA >Mature_276_residues MRLSISNIAWDAEEDAAVAALLARHAVDAVDVAPGKYFPRPQQATDAEVAEVRRWWASRGIEITGMQALLFGTTGLNVFG PADVQRAMLAHLDAVCRIGGGLGAKCLVFGSPKNRDRAALDDSRVLDVACGFFSRLGDVAARHGVVVCLEPNPVAYGANF MTTSAETAAVVRAVGHPAIRMQLDIGALAMNGEDIGEVAAAHGDLIAHIHASEPGLKTLGDGGSDHARAAAVLADGRVGK LVCIEMLAANDEPHLAAIERALLAADATYRVAERGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28787; Mature: 28787
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSISNIAWDAEEDAAVAALLARHAVDAVDVAPGKYFPRPQQATDAEVAEVRRWWASRG CEEECCCCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCC IEITGMQALLFGTTGLNVFGPADVQRAMLAHLDAVCRIGGGLGAKCLVFGSPKNRDRAAL EEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC DDSRVLDVACGFFSRLGDVAARHGVVVCLEPNPVAYGANFMTTSAETAAVVRAVGHPAIR CCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEECCCEEECCHHHHHHHHHHCCCEEE MQLDIGALAMNGEDIGEVAAAHGDLIAHIHASEPGLKTLGDGGSDHARAAAVLADGRVGK EEEEECEEEECCCHHHHHHHHCCCEEEEEECCCCCCHHCCCCCCCHHHEEEEEECCCCCH LVCIEMLAANDEPHLAAIERALLAADATYRVAERGA HHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCCC >Mature Secondary Structure MRLSISNIAWDAEEDAAVAALLARHAVDAVDVAPGKYFPRPQQATDAEVAEVRRWWASRG CEEECCCCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCC IEITGMQALLFGTTGLNVFGPADVQRAMLAHLDAVCRIGGGLGAKCLVFGSPKNRDRAAL EEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC DDSRVLDVACGFFSRLGDVAARHGVVVCLEPNPVAYGANFMTTSAETAAVVRAVGHPAIR CCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEECCCEEECCHHHHHHHHHHCCCEEE MQLDIGALAMNGEDIGEVAAAHGDLIAHIHASEPGLKTLGDGGSDHARAAAVLADGRVGK EEEEECEEEECCCHHHHHHHHCCCEEEEEECCCCCCHHCCCCCCCHHHEEEEEECCCCCH LVCIEMLAANDEPHLAAIERALLAADATYRVAERGA HHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA