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The map label for this gene is ureF

Identifier: 119899791

GI number: 119899791

Start: 3845086

End: 3845790

Strand: Reverse

Name: ureF

Synonym: azo3502

Alternate gene names: 119899791

Gene position: 3845790-3845086 (Counterclockwise)

Preceding gene: 119899792

Following gene: 119899790

Centisome position: 87.88

GC content: 71.77

Gene sequence:

>705_bases
GTGAGCACCAATCCGGCCGGCGGCCTGCTGCCCCTGATCCGCCTGCTGCAACTCGCCAGCCCCGCGCTGCCCGTCGGCGC
CTACACCTATTCGCAAGGGCTGGAGTGGGCGGTGGAATGCGGCACGGTGCGTACCGAGGCCGACGCCCGGCGCTGGATCG
GCGACGTGCTGGAATGGAGCCTCGCCCGCTTCGAAGCCCCGCTGGTCGCGCGTCTGCTGGCAGCGTGGGCCGACGGCGAC
GACGCCGAAGTGGCCCGTCTCAACGAGGACTTCCTCGCCAGCCGCGAAACCTCCGAACTACGCGCCGAGACCGTGCAGAT
GGGCTACTCGCTGGTCCGCCTGCTCGCCGACCTCGACGCCTTCGCCGGCCTGCCCGGCTGGAAGGCGCGGCTCGTCGCGC
TCGACACGCCGGCTTTCCCGGTGGCCTGGACCGCTGCCGCCGCGGCCTGGCGGATTCCCGCGGACCAAGCGCTTTCGGCC
TACCTGTGGGCCTGGCTGGAAAACCAGGTGATGGCGGCGGTGAAGGCGGTGCCGCTCGGCCAGAGCGCCGGCCAGCGCCT
GCTCGCCGATCTCGGCGCCGCGGTGCCGGCGTTGGTGGAGGCCGCGCAGTGCCTGCCGGAAGCGGAATGGAGCAACTTCA
CGCCCGGCCTGGCGATCGCCAGCAGCCGGCACGAAACCCAGTACACCCGGCTGTTCAGATCATGA

Upstream 100 bases:

>100_bases
CGCTGCGCGCGCCCTTCGAACCCGAAGCCGGCGCCTACGCCCACGGCCACCAGCACCCGGGCGACGGCAGCGGTGCGCGC
ATCCACATGATGGGCGGCCA

Downstream 100 bases:

>100_bases
GGCAGGATTCGGACCCGCGCTGAGGCCAAGCCGGACGTGTCGGGTATTCGTGGAGCCGGCGAGGACTGTCCGAGCGAAGC
GAGTTCCGCAGCCTGCGGAG

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MSTNPAGGLLPLIRLLQLASPALPVGAYTYSQGLEWAVECGTVRTEADARRWIGDVLEWSLARFEAPLVARLLAAWADGD
DAEVARLNEDFLASRETSELRAETVQMGYSLVRLLADLDAFAGLPGWKARLVALDTPAFPVAWTAAAAAWRIPADQALSA
YLWAWLENQVMAAVKAVPLGQSAGQRLLADLGAAVPALVEAAQCLPEAEWSNFTPGLAIASSRHETQYTRLFRS

Sequences:

>Translated_234_residues
MSTNPAGGLLPLIRLLQLASPALPVGAYTYSQGLEWAVECGTVRTEADARRWIGDVLEWSLARFEAPLVARLLAAWADGD
DAEVARLNEDFLASRETSELRAETVQMGYSLVRLLADLDAFAGLPGWKARLVALDTPAFPVAWTAAAAAWRIPADQALSA
YLWAWLENQVMAAVKAVPLGQSAGQRLLADLGAAVPALVEAAQCLPEAEWSNFTPGLAIASSRHETQYTRLFRS
>Mature_233_residues
STNPAGGLLPLIRLLQLASPALPVGAYTYSQGLEWAVECGTVRTEADARRWIGDVLEWSLARFEAPLVARLLAAWADGDD
AEVARLNEDFLASRETSELRAETVQMGYSLVRLLADLDAFAGLPGWKARLVALDTPAFPVAWTAAAAAWRIPADQALSAY
LWAWLENQVMAAVKAVPLGQSAGQRLLADLGAAVPALVEAAQCLPEAEWSNFTPGLAIASSRHETQYTRLFRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UREF_AZOSB (A1KBB2)

Other databases:

- EMBL:   AM406670
- RefSeq:   YP_935004.1
- STRING:   A1KBB2
- GeneID:   4610075
- GenomeReviews:   AM406670_GR
- KEGG:   azo:azo3502
- eggNOG:   COG0830
- HOGENOM:   HBG709295
- OMA:   SPQLPIG
- ProtClustDB:   CLSK768358
- BioCyc:   ASP62928:AZO3502-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01385
- InterPro:   IPR002639
- PIRSF:   PIRSF009467

Pfam domain/function: PF01730 UreF

EC number: NA

Molecular weight: Translated: 25246; Mature: 25115

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNPAGGLLPLIRLLQLASPALPVGAYTYSQGLEWAVECGTVRTEADARRWIGDVLEWS
CCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHH
LARFEAPLVARLLAAWADGDDAEVARLNEDFLASRETSELRAETVQMGYSLVRLLADLDA
HHHHCHHHHHHHHHHHCCCCCHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FAGLPGWKARLVALDTPAFPVAWTAAAAAWRIPADQALSAYLWAWLENQVMAAVKAVPLG
HHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
QSAGQRLLADLGAAVPALVEAAQCLPEAEWSNFTPGLAIASSRHETQYTRLFRS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure 
STNPAGGLLPLIRLLQLASPALPVGAYTYSQGLEWAVECGTVRTEADARRWIGDVLEWS
CCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHH
LARFEAPLVARLLAAWADGDDAEVARLNEDFLASRETSELRAETVQMGYSLVRLLADLDA
HHHHCHHHHHHHHHHHCCCCCHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FAGLPGWKARLVALDTPAFPVAWTAAAAAWRIPADQALSAYLWAWLENQVMAAVKAVPLG
HHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
QSAGQRLLADLGAAVPALVEAAQCLPEAEWSNFTPGLAIASSRHETQYTRLFRS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA