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The map label for this gene is pilH [H]

Identifier: 119899743

GI number: 119899743

Start: 3787065

End: 3787430

Strand: Direct

Name: pilH [H]

Synonym: azo3454

Alternate gene names: 119899743

Gene position: 3787065-3787430 (Clockwise)

Preceding gene: 119899742

Following gene: 119899744

Centisome position: 86.54

GC content: 61.48

Gene sequence:

>366_bases
ATGCCGATCAACAAGATCCTCGTGGTCGACGACTCGCCGACCGAACGTCTCGCCCTTACCGAACTCCTGACGCGCCACGG
CTACCAGGTGGCCACCGCCGAAAGCGGTGAAGAGGCGATCACCAAGAGCAAGAGCGAAAAGCCCGACCTGATCCTGATGG
ACGTGGTGATGCCCGGCATGAACGGCTACCAGGCAACGCGCACCATCTCGCGCGACGACGCCACCCGCAACATCCCGATC
ATCATGTGCACCAGCAAGGGGCTGGAAACCGACAAGATCTGGGGCATGCGCCAGGGCGCTTACGACTATCTGGTGAAGCC
GGTCGAGCACAACGAACTGCTCGCACGCATCAAGTCCATCGGCTGA

Upstream 100 bases:

>100_bases
AGTACCTCACCAAGCCCTTCACGAAGGACAGCCTGCTCAAGGCGGTTGCCACCTATACCGGCCGCGCACCGGCCTGAACC
CGTACGGAAGCACACGCACG

Downstream 100 bases:

>100_bases
ACACGACATGTCGAAGCGGATCAGCCTGCGCGAATTCCAGGAGAACCTGGTGCGCCGCCTCTCCGAGGCCCGCACCGGCG
AGCGCCGCGGCCTGCTGGGC

Product: pilus protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MPINKILVVDDSPTERLALTELLTRHGYQVATAESGEEAITKSKSEKPDLILMDVVMPGMNGYQATRTISRDDATRNIPI
IMCTSKGLETDKIWGMRQGAYDYLVKPVEHNELLARIKSIG

Sequences:

>Translated_121_residues
MPINKILVVDDSPTERLALTELLTRHGYQVATAESGEEAITKSKSEKPDLILMDVVMPGMNGYQATRTISRDDATRNIPI
IMCTSKGLETDKIWGMRQGAYDYLVKPVEHNELLARIKSIG
>Mature_120_residues
PINKILVVDDSPTERLALTELLTRHGYQVATAESGEEAITKSKSEKPDLILMDVVMPGMNGYQATRTISRDDATRNIPII
MCTSKGLETDKIWGMRQGAYDYLVKPVEHNELLARIKSIG

Specific function: May be a part of a signal-transduction system that regulates twitching motility by controlling pilus function (extension and retraction) [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=117, Percent_Identity=38.4615384615385, Blast_Score=94, Evalue=2e-21,
Organism=Escherichia coli, GI1789809, Length=116, Percent_Identity=38.7931034482759, Blast_Score=80, Evalue=5e-17,
Organism=Escherichia coli, GI1788394, Length=124, Percent_Identity=34.6774193548387, Blast_Score=77, Evalue=4e-16,
Organism=Escherichia coli, GI87082012, Length=115, Percent_Identity=31.304347826087, Blast_Score=75, Evalue=1e-15,
Organism=Escherichia coli, GI1786784, Length=116, Percent_Identity=33.6206896551724, Blast_Score=74, Evalue=4e-15,
Organism=Escherichia coli, GI2367329, Length=118, Percent_Identity=38.9830508474576, Blast_Score=73, Evalue=5e-15,
Organism=Escherichia coli, GI1787229, Length=120, Percent_Identity=35, Blast_Score=73, Evalue=7e-15,
Organism=Escherichia coli, GI1788550, Length=111, Percent_Identity=34.2342342342342, Blast_Score=72, Evalue=1e-14,
Organism=Escherichia coli, GI1788905, Length=112, Percent_Identity=35.7142857142857, Blast_Score=67, Evalue=5e-13,
Organism=Escherichia coli, GI1786911, Length=116, Percent_Identity=31.8965517241379, Blast_Score=66, Evalue=7e-13,
Organism=Escherichia coli, GI1789149, Length=113, Percent_Identity=33.6283185840708, Blast_Score=64, Evalue=3e-12,
Organism=Escherichia coli, GI1790860, Length=102, Percent_Identity=27.4509803921569, Blast_Score=64, Evalue=3e-12,
Organism=Escherichia coli, GI1790437, Length=113, Percent_Identity=33.6283185840708, Blast_Score=63, Evalue=5e-12,
Organism=Escherichia coli, GI1788191, Length=117, Percent_Identity=32.4786324786325, Blast_Score=63, Evalue=6e-12,
Organism=Escherichia coli, GI145693157, Length=103, Percent_Identity=37.8640776699029, Blast_Score=63, Evalue=6e-12,
Organism=Escherichia coli, GI1790299, Length=113, Percent_Identity=31.858407079646, Blast_Score=63, Evalue=7e-12,
Organism=Escherichia coli, GI1790863, Length=120, Percent_Identity=32.5, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 13476; Mature: 13345

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPINKILVVDDSPTERLALTELLTRHGYQVATAESGEEAITKSKSEKPDLILMDVVMPGM
CCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCCCEEEEEEECCCC
NGYQATRTISRDDATRNIPIIMCTSKGLETDKIWGMRQGAYDYLVKPVEHNELLARIKSI
CCCCHHEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHC
G
C
>Mature Secondary Structure 
PINKILVVDDSPTERLALTELLTRHGYQVATAESGEEAITKSKSEKPDLILMDVVMPGM
CCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCCCEEEEEEECCCC
NGYQATRTISRDDATRNIPIIMCTSKGLETDKIWGMRQGAYDYLVKPVEHNELLARIKSI
CCCCHHEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7908398; 10984043 [H]