Click here to switch to the map view.

The map label for this gene is 119899566

Identifier: 119899566

GI number: 119899566

Start: 3615137

End: 3615997

Strand: Reverse

Name: 119899566

Synonym: azo3277

Alternate gene names: NA

Gene position: 3615997-3615137 (Counterclockwise)

Preceding gene: 119899567

Following gene: 119899565

Centisome position: 82.63

GC content: 65.16

Gene sequence:

>861_bases
ATGGACGCTGCCGAGGTTTCGCCGCGCGGAGAATTGACCAATGCGCTGACGATCGACGTCGAGGATTACTTCCAGGTGTC
GGCGCTGGCGCCGCATTTCCCGCGTGAGCGATGGGATTCCGTGCCCTGCCGGGTGGAACGCAACGTCGACCTGATCCTCG
GCCTGCTGGCCGAGCGGGAGGCGCGCGCGACCTTCTTTACCCTGGGCTGGGTCGCCGAGCGCTATCCGCAACTGGTGCGC
CGTATCTGCGCCGCAGGGCACGAACTTGCCAGTCATGGCTACGCCCATGAGCGGGCGAGCGCTCAGACCCCGCAGGCTTT
TCTTGCGGACATCGCCTTGGCGAAGAGTGTCCTGGAGGACATCGGCGGCGTCGCGGTAACTGGCTACCGTGCGCCAAGCT
TCTCCATCGGCCTCGGTAACCCTTGGGCGCACGACGTCATCGCCGAAGCCGGTTATCGCTACAGTTCCAGCGTCTACCCG
GTCAAGCACGACCACTACGGCATTCCCGACGCGCCGCGCTTCCCGTATCGACTGTCCAGCGGGTTGGTTGAAATTCCGGT
CAGCACCATGCGCTGGCTGGGGCGCAACTGGCCAGCGGGCGGGGGCGGTTATTTCCGTCTGCTGCCGTATGCAGTATCCC
GCTGGCAGATCGCGCGTGTGAATCGTGACGACCGCCGTCCGGCGATCTTCTATTTCCATCCTTGGGAGGTCGATCCGGCG
CAGCCGCGCGTCAGCGAGGCATCGACCAAGACGCGGTTCCGCCACTACATCAACCTCGAACGTACCGAACACCGCTTGCG
GCGCCTGCTGGGCGACTTCAGGTGGGGGCGTGCGGACGAAGTCTTTCGCGACGCCGCGTGA

Upstream 100 bases:

>100_bases
GCGGGCGGGTGCCGGAGTTGTGGGACGGTCATACCGCGGAGCGCATCGCCGCCCACCTGGCGAACTGGCTCGCGGAACGC
GAACAACGCGAGGCCAGCTG

Downstream 100 bases:

>100_bases
ATTCGCGGCCTTTCCGAGTCTCGTCATGGACCGTCTGAGCACCACGATCAAGACCCTGGACGCGGCGGATGCGGCGCGTT
GGGATGCGTTCGTCCTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Family Protein; Polysaccharide Deacetylase Domain-Containing Protein; PEP-CTERM Locus Polysaccharide Deactylase; Polysaccharide Deactylase Domain-Containing Protein; Polysaccharide Deacetylase N-Terminal Fragment; Polysaccharide Deacetylase Pda4C; Chitooligosaccharide Deacetylase

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MDAAEVSPRGELTNALTIDVEDYFQVSALAPHFPRERWDSVPCRVERNVDLILGLLAEREARATFFTLGWVAERYPQLVR
RICAAGHELASHGYAHERASAQTPQAFLADIALAKSVLEDIGGVAVTGYRAPSFSIGLGNPWAHDVIAEAGYRYSSSVYP
VKHDHYGIPDAPRFPYRLSSGLVEIPVSTMRWLGRNWPAGGGGYFRLLPYAVSRWQIARVNRDDRRPAIFYFHPWEVDPA
QPRVSEASTKTRFRHYINLERTEHRLRRLLGDFRWGRADEVFRDAA

Sequences:

>Translated_286_residues
MDAAEVSPRGELTNALTIDVEDYFQVSALAPHFPRERWDSVPCRVERNVDLILGLLAEREARATFFTLGWVAERYPQLVR
RICAAGHELASHGYAHERASAQTPQAFLADIALAKSVLEDIGGVAVTGYRAPSFSIGLGNPWAHDVIAEAGYRYSSSVYP
VKHDHYGIPDAPRFPYRLSSGLVEIPVSTMRWLGRNWPAGGGGYFRLLPYAVSRWQIARVNRDDRRPAIFYFHPWEVDPA
QPRVSEASTKTRFRHYINLERTEHRLRRLLGDFRWGRADEVFRDAA
>Mature_286_residues
MDAAEVSPRGELTNALTIDVEDYFQVSALAPHFPRERWDSVPCRVERNVDLILGLLAEREARATFFTLGWVAERYPQLVR
RICAAGHELASHGYAHERASAQTPQAFLADIALAKSVLEDIGGVAVTGYRAPSFSIGLGNPWAHDVIAEAGYRYSSSVYP
VKHDHYGIPDAPRFPYRLSSGLVEIPVSTMRWLGRNWPAGGGGYFRLLPYAVSRWQIARVNRDDRRPAIFYFHPWEVDPA
QPRVSEASTKTRFRHYINLERTEHRLRRLLGDFRWGRADEVFRDAA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32477; Mature: 32477

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAAEVSPRGELTNALTIDVEDYFQVSALAPHFPRERWDSVPCRVERNVDLILGLLAERE
CCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCHHHHCCCCEEECCCHHHHHHHHHHHH
ARATFFTLGWVAERYPQLVRRICAAGHELASHGYAHERASAQTPQAFLADIALAKSVLED
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHH
IGGVAVTGYRAPSFSIGLGNPWAHDVIAEAGYRYSSSVYPVKHDHYGIPDAPRFPYRLSS
CCCEEEEECCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC
GLVEIPVSTMRWLGRNWPAGGGGYFRLLPYAVSRWQIARVNRDDRRPAIFYFHPWEVDPA
CEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCCCC
QPRVSEASTKTRFRHYINLERTEHRLRRLLGDFRWGRADEVFRDAA
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCC
>Mature Secondary Structure
MDAAEVSPRGELTNALTIDVEDYFQVSALAPHFPRERWDSVPCRVERNVDLILGLLAERE
CCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCHHHHCCCCEEECCCHHHHHHHHHHHH
ARATFFTLGWVAERYPQLVRRICAAGHELASHGYAHERASAQTPQAFLADIALAKSVLED
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHH
IGGVAVTGYRAPSFSIGLGNPWAHDVIAEAGYRYSSSVYPVKHDHYGIPDAPRFPYRLSS
CCCEEEEECCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC
GLVEIPVSTMRWLGRNWPAGGGGYFRLLPYAVSRWQIARVNRDDRRPAIFYFHPWEVDPA
CEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCCCC
QPRVSEASTKTRFRHYINLERTEHRLRRLLGDFRWGRADEVFRDAA
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA