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The map label for this gene is dcd [H]

Identifier: 119899489

GI number: 119899489

Start: 3522456

End: 3523022

Strand: Reverse

Name: dcd [H]

Synonym: azo3200

Alternate gene names: 119899489

Gene position: 3523022-3522456 (Counterclockwise)

Preceding gene: 119899490

Following gene: 119899488

Centisome position: 80.51

GC content: 59.26

Gene sequence:

>567_bases
ATGTCCATCAAGTCCGACAAGTGGATCCGCCGCATGGCGGAGCAGCAAGGGATGATCGCGCCGTTCGCGCCCGAGCTGGT
CCGCAGCAACGAAGGCGGCAAGATCGTGTCCTACGGCACCTCCAGCTACGGCTACGATGTGCGGTGCGCGAACGAATTCA
AGATCTTCACCAACATCAACTCGACCATCGTCGATCCGAAGGACTTCGATGCGCGTAACTTCGTCGATTTCGTTGGTGAC
GTCTGCATCATCCCGCCCAACTCCTTCGCGCTTGCCCGCACGGTGGAGTTTTTCCGCATCCCGCGCAACGTGCTCACGGT
CTGTCTGGGCAAGAGTACCTATGCGCGCTGCGGCATCATCGTCAACGTGACCCCGCTGGAGCCGGAATGGGAGGGCCACG
TGACGCTTGAGTTTTCCAACACCACGCCGCTGCCGGCGAAGATCTACGCCAATGAAGGCGTCGCGCAGATGCTCTTCTTC
GAATCCGATGAAGAGTGCGAAACCTCCTACAAGGATCGTGGGGGCAAGTATTTCGGGCAAACGGGTGTCACGCTGCCCAA
GATCTGA

Upstream 100 bases:

>100_bases
GGCGCCGCCGCCGCAGCTTGCTTTTCCTGCGGCGGCGCATGCCCTACACTTGCCGATTTTTCGCACCCGGTCCTCGGGGC
CGCACAGGAAGCCGCGCCAG

Downstream 100 bases:

>100_bases
TCATGGAACACCCCGCGCCGCATTGGGTGCGAAGCGGGGTTGTTGCACGGGAAATACGCCGGGGGCCGTCAGTCGGCCCT
TTTCTACTTCTGCCGACGTC

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSIKSDKWIRRMAEQQGMIAPFAPELVRSNEGGKIVSYGTSSYGYDVRCANEFKIFTNINSTIVDPKDFDARNFVDFVGD
VCIIPPNSFALARTVEFFRIPRNVLTVCLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPAKIYANEGVAQMLFF
ESDEECETSYKDRGGKYFGQTGVTLPKI

Sequences:

>Translated_188_residues
MSIKSDKWIRRMAEQQGMIAPFAPELVRSNEGGKIVSYGTSSYGYDVRCANEFKIFTNINSTIVDPKDFDARNFVDFVGD
VCIIPPNSFALARTVEFFRIPRNVLTVCLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPAKIYANEGVAQMLFF
ESDEECETSYKDRGGKYFGQTGVTLPKI
>Mature_187_residues
SIKSDKWIRRMAEQQGMIAPFAPELVRSNEGGKIVSYGTSSYGYDVRCANEFKIFTNINSTIVDPKDFDARNFVDFVGDV
CIIPPNSFALARTVEFFRIPRNVLTVCLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPAKIYANEGVAQMLFFE
SDEECETSYKDRGGKYFGQTGVTLPKI

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 21062; Mature: 20931

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKSDKWIRRMAEQQGMIAPFAPELVRSNEGGKIVSYGTSSYGYDVRCANEFKIFTNIN
CCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEECCCCCCEEEEECCCEEEEECCC
STIVDPKDFDARNFVDFVGDVCIIPPNSFALARTVEFFRIPRNVLTVCLGKSTYARCGII
CEEECCCCCCHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEE
VNVTPLEPEWEGHVTLEFSNTTPLPAKIYANEGVAQMLFFESDEECETSYKDRGGKYFGQ
EEEECCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHCCCEEECC
TGVTLPKI
CCCCCCCC
>Mature Secondary Structure 
SIKSDKWIRRMAEQQGMIAPFAPELVRSNEGGKIVSYGTSSYGYDVRCANEFKIFTNIN
CCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEECCCCCCEEEEECCCEEEEECCC
STIVDPKDFDARNFVDFVGDVCIIPPNSFALARTVEFFRIPRNVLTVCLGKSTYARCGII
CEEECCCCCCHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEE
VNVTPLEPEWEGHVTLEFSNTTPLPAKIYANEGVAQMLFFESDEECETSYKDRGGKYFGQ
EEEECCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHCCCEEECC
TGVTLPKI
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA