| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
Click here to switch to the map view.
The map label for this gene is 119899440
Identifier: 119899440
GI number: 119899440
Start: 3460566
End: 3461057
Strand: Reverse
Name: 119899440
Synonym: azo3150
Alternate gene names: NA
Gene position: 3461057-3460566 (Counterclockwise)
Preceding gene: 119899441
Following gene: 119899439
Centisome position: 79.09
GC content: 66.26
Gene sequence:
>492_bases ATGGTCAAGCAGTCGAAGAAGCACGGTGCGGCGCTCGCCGCAACCGCAGAGAGCACGCGTGTCGTCGTCGAGGTCGCGGG TCTGCGCCGCAGGCTCGCGAGCATGTTGTACGAATCCATGTTGTTGCTGGGCGTGCTCGCACTCACGTTCATGGTTCCCT ACCTGATCATCGGCGCCCTGTTCCAGGTGGCGCCGCCGGGATGGCTGGGCTGGCTGCATCTGTTCGTCGTGCTCGGGTGC TATTTCGTCTGGTACTGGCGGCGCAACGGCCAGACCCTGGCGATGCAGACCTGGCGGCTGAAGATCGTTACCGCGGACGG ACAGCCGCTGGCGCTCGGGCGTTGCTGGCTGCGATATGCGCTGGCGTGGCCCTCGGTGCTGCTGTTCGGGGTCGGCCTGC TGTGGGCGTTGATCGACCGCGATCGCCAGTTCCTTCACGACCGCCTTGCCGGCAGCCACGTGGTGTTGCTGCCACCCGCG CAGAAGGCCTGA
Upstream 100 bases:
>100_bases CCGAGTGGGAGCGCTACCGCAGCCTGCCACCCGAAGCCCGCACGCCGCAGGGAGGCGCTGGCGGCGGGGTGACCGAAACC GGCGGGCGTTGAGAGGATAG
Downstream 100 bases:
>100_bases CCGGCGCCGCCGCGGGGCCTCGCGGGGTCGATCAGCCGCACAGAATGGCGGCAGCGTAGAACTTTCGCACGGCGCCGCGG TTTAACCGGTCGATATATGT
Product: putative RDD family protein
Products: NA
Alternate protein names: RDD Domain-Containing Protein; Transmembrane Protein; RDD Family Protein; RDD Family; Transmembrane RDD Family Protein; RDD Family Membrane Protein; RDD Domain Protein; SecF Protein
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MVKQSKKHGAALAATAESTRVVVEVAGLRRRLASMLYESMLLLGVLALTFMVPYLIIGALFQVAPPGWLGWLHLFVVLGC YFVWYWRRNGQTLAMQTWRLKIVTADGQPLALGRCWLRYALAWPSVLLFGVGLLWALIDRDRQFLHDRLAGSHVVLLPPA QKA
Sequences:
>Translated_163_residues MVKQSKKHGAALAATAESTRVVVEVAGLRRRLASMLYESMLLLGVLALTFMVPYLIIGALFQVAPPGWLGWLHLFVVLGC YFVWYWRRNGQTLAMQTWRLKIVTADGQPLALGRCWLRYALAWPSVLLFGVGLLWALIDRDRQFLHDRLAGSHVVLLPPA QKA >Mature_163_residues MVKQSKKHGAALAATAESTRVVVEVAGLRRRLASMLYESMLLLGVLALTFMVPYLIIGALFQVAPPGWLGWLHLFVVLGC YFVWYWRRNGQTLAMQTWRLKIVTADGQPLALGRCWLRYALAWPSVLLFGVGLLWALIDRDRQFLHDRLAGSHVVLLPPA QKA
Specific function: Unknown
COG id: COG1714
COG function: function code S; Predicted membrane protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18326; Mature: 18326
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKQSKKHGAALAATAESTRVVVEVAGLRRRLASMLYESMLLLGVLALTFMVPYLIIGAL CCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQVAPPGWLGWLHLFVVLGCYFVWYWRRNGQTLAMQTWRLKIVTADGQPLALGRCWLRYA HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHH LAWPSVLLFGVGLLWALIDRDRQFLHDRLAGSHVVLLPPAQKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC >Mature Secondary Structure MVKQSKKHGAALAATAESTRVVVEVAGLRRRLASMLYESMLLLGVLALTFMVPYLIIGAL CCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQVAPPGWLGWLHLFVVLGCYFVWYWRRNGQTLAMQTWRLKIVTADGQPLALGRCWLRYA HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHH LAWPSVLLFGVGLLWALIDRDRQFLHDRLAGSHVVLLPPAQKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA