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The map label for this gene is nosD [H]

Identifier: 119899400

GI number: 119899400

Start: 3416272

End: 3417549

Strand: Reverse

Name: nosD [H]

Synonym: azo3110

Alternate gene names: 119899400

Gene position: 3417549-3416272 (Counterclockwise)

Preceding gene: 119899401

Following gene: 119899399

Centisome position: 78.1

GC content: 67.29

Gene sequence:

>1278_bases
ATGCGCCACGCCGTCGTCCGCCTGCTGATCCTCGCCGCCTGCGCCGCGCTCGCGCAGGGCGCGGCCGCTGCCACGCTGCG
GGTGGCGCCAGGCGAATCCATCCAGGCGGTGCTGGATCGCGCCGAAGCCGGCGACGTGGTGGAGGTGGCGCGCGCCCGCT
ACGAGGAAAACCTGCGCATCGCCAAACCGCTGACGCTGCGCGGCATCGACCGCCCGACCATATCCGGCGGCGAGCGCGGC
GACACCATCCGCGTCACCGCCACCGACGTGGTCATCGAGGGCTTGATCGTCGCCGATTCCGGCGGCAGCCTGCGCGAGCA
GAACGCCGGCATCTACCTGCAGCCCGGCGCGCACCGCGCGGTGGTGCGCCGCTGCGACCTCACCTACAACCTGTTCGGCC
TGTGGGTGGAGCAGGCCGACGACGTGCTGATCGAAGGCAACGTCATCACCGGCAAGCGCGACTACCAATCGTCCCAGCGC
GGCAACGGCGTGCAGCTGTACAACACCCGCCGCGCGAAGGTGATCGGCAACCAGGTCAGCTTCGTGCGCGACGCGCTCTA
TGTGGACGTCACCCACGACGCGGTCTTCCGCGGCAACAAGCTGCACCACAGCCGCTACGGCACCCACTACATGAACTCCT
ACCGCAATCTGTGGGAGGACAACGACGTGTGGATGAACCGCGGCGGGCTGGCGCTGATGGAGGTGCGCGACCAGGTCGTG
CGCAACAACCGCGTCTGGGCCAATTCCGACCACGGCATCATGCTGCGCACCATCCAGGACGCGGTGGTGGAGAACAACAT
CGTCGCCGGCAACTCGCGCGGCTTCTTCATCTACGACGCCGAATACAACACCCTGCGCGGCAACCTGCTGGTCGACAACA
TCGTCGGCGTGCACCTGTGGGCCGGCTCCAAGAACAACCAGGTCGAGCGCAACGACTTCGTCGCCAACCGCGAGCAGGTG
CGCTACGTCGGCGCCCGGGACGAATTGTGGGGGATCAAGGAAGGCAACCACTGGAGCAACTATCTTGGCTGGGACCGCAA
CGGCGATGGCGTGGGCGATGTGCGTTACGAAGCCAACGACCTGGTCGATCGCCTGAGCTGGAAGCACCCGCTGATGAAGC
TGCTGCTCGCCAGCCCGGCGGTTCAGACCCTGCGTCTGGTCGGCCAGCAGTTTCCGCTGCTGCGTGCCCCCAGCGTGGTC
GACCCCAAGCCGCGCATGCGGCCCGACAAGGACAACTGGAGAGACTGGCGTGGCAAGACTTTCCCTGGTGCGCGCTGA

Upstream 100 bases:

>100_bases
ATGGACATGCTCTGCTACGTCGGTTTCAAGAACCTGCTGATCGGCGCCGCGCTGTTCCTGGCGCTGAAGTCGCTCGGCCT
GCTGGTGGTGTGAGTCCGTC

Downstream 100 bases:

>100_bases
ACCGCCCGCCGCCGAGCCGCCCCGAGCCATGACGCAGACGGCAACGCAGGCCGCGGGCGATGCGGCCGACGCAGTGATCA
CTGCCCGGGGCGTGCGCCGC

Product: putative copper transport system periplasmic-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MRHAVVRLLILAACAALAQGAAAATLRVAPGESIQAVLDRAEAGDVVEVARARYEENLRIAKPLTLRGIDRPTISGGERG
DTIRVTATDVVIEGLIVADSGGSLREQNAGIYLQPGAHRAVVRRCDLTYNLFGLWVEQADDVLIEGNVITGKRDYQSSQR
GNGVQLYNTRRAKVIGNQVSFVRDALYVDVTHDAVFRGNKLHHSRYGTHYMNSYRNLWEDNDVWMNRGGLALMEVRDQVV
RNNRVWANSDHGIMLRTIQDAVVENNIVAGNSRGFFIYDAEYNTLRGNLLVDNIVGVHLWAGSKNNQVERNDFVANREQV
RYVGARDELWGIKEGNHWSNYLGWDRNGDGVGDVRYEANDLVDRLSWKHPLMKLLLASPAVQTLRLVGQQFPLLRAPSVV
DPKPRMRPDKDNWRDWRGKTFPGAR

Sequences:

>Translated_425_residues
MRHAVVRLLILAACAALAQGAAAATLRVAPGESIQAVLDRAEAGDVVEVARARYEENLRIAKPLTLRGIDRPTISGGERG
DTIRVTATDVVIEGLIVADSGGSLREQNAGIYLQPGAHRAVVRRCDLTYNLFGLWVEQADDVLIEGNVITGKRDYQSSQR
GNGVQLYNTRRAKVIGNQVSFVRDALYVDVTHDAVFRGNKLHHSRYGTHYMNSYRNLWEDNDVWMNRGGLALMEVRDQVV
RNNRVWANSDHGIMLRTIQDAVVENNIVAGNSRGFFIYDAEYNTLRGNLLVDNIVGVHLWAGSKNNQVERNDFVANREQV
RYVGARDELWGIKEGNHWSNYLGWDRNGDGVGDVRYEANDLVDRLSWKHPLMKLLLASPAVQTLRLVGQQFPLLRAPSVV
DPKPRMRPDKDNWRDWRGKTFPGAR
>Mature_425_residues
MRHAVVRLLILAACAALAQGAAAATLRVAPGESIQAVLDRAEAGDVVEVARARYEENLRIAKPLTLRGIDRPTISGGERG
DTIRVTATDVVIEGLIVADSGGSLREQNAGIYLQPGAHRAVVRRCDLTYNLFGLWVEQADDVLIEGNVITGKRDYQSSQR
GNGVQLYNTRRAKVIGNQVSFVRDALYVDVTHDAVFRGNKLHHSRYGTHYMNSYRNLWEDNDVWMNRGGLALMEVRDQVV
RNNRVWANSDHGIMLRTIQDAVVENNIVAGNSRGFFIYDAEYNTLRGNLLVDNIVGVHLWAGSKNNQVERNDFVANREQV
RYVGARDELWGIKEGNHWSNYLGWDRNGDGVGDVRYEANDLVDRLSWKHPLMKLLLASPAVQTLRLVGQQFPLLRAPSVV
DPKPRMRPDKDNWRDWRGKTFPGAR

Specific function: Involved in copper processing and transport; in the assembly of the copper chromophores of nitrous oxide reductase [H]

COG id: COG3420

COG function: function code P; Nitrous oxidase accessory protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006633
- InterPro:   IPR007742
- InterPro:   IPR022441
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF05048 NosD [H]

EC number: NA

Molecular weight: Translated: 47728; Mature: 47728

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHAVVRLLILAACAALAQGAAAATLRVAPGESIQAVLDRAEAGDVVEVARARYEENLRI
CHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEE
AKPLTLRGIDRPTISGGERGDTIRVTATDVVIEGLIVADSGGSLREQNAGIYLQPGAHRA
ECCEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCHHCCCCEEECCCCCHH
VVRRCDLTYNLFGLWVEQADDVLIEGNVITGKRDYQSSQRGNGVQLYNTRRAKVIGNQVS
HHHHHCCEEEHHHEEEECCCCEEEECEEEECCCCCCCCCCCCCEEEEECCCHHHHCCHHH
FVRDALYVDVTHDAVFRGNKLHHSRYGTHYMNSYRNLWEDNDVWMNRGGLALMEVRDQVV
HHHHEEEEEEEHHHHHCCCCEEHHHCCHHHHHHHHHCCCCCCEEEECCCEEHHHHHHHHH
RNNRVWANSDHGIMLRTIQDAVVENNIVAGNSRGFFIYDAEYNTLRGNLLVDNIVGVHLW
HCCCEEECCCCCEEEEEHHHHHHCCCEEECCCCEEEEEECCCCEEECCEEEECEEEEEEE
AGSKNNQVERNDFVANREQVRYVGARDELWGIKEGNHWSNYLGWDRNGDGVGDVRYEAND
ECCCCCCCCCHHHHCCHHHEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEECHHH
LVDRLSWKHPLMKLLLASPAVQTLRLVGQQFPLLRAPSVVDPKPRMRPDKDNWRDWRGKT
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCC
FPGAR
CCCCC
>Mature Secondary Structure
MRHAVVRLLILAACAALAQGAAAATLRVAPGESIQAVLDRAEAGDVVEVARARYEENLRI
CHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEE
AKPLTLRGIDRPTISGGERGDTIRVTATDVVIEGLIVADSGGSLREQNAGIYLQPGAHRA
ECCEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCHHCCCCEEECCCCCHH
VVRRCDLTYNLFGLWVEQADDVLIEGNVITGKRDYQSSQRGNGVQLYNTRRAKVIGNQVS
HHHHHCCEEEHHHEEEECCCCEEEECEEEECCCCCCCCCCCCCEEEEECCCHHHHCCHHH
FVRDALYVDVTHDAVFRGNKLHHSRYGTHYMNSYRNLWEDNDVWMNRGGLALMEVRDQVV
HHHHEEEEEEEHHHHHCCCCEEHHHCCHHHHHHHHHCCCCCCEEEECCCEEHHHHHHHHH
RNNRVWANSDHGIMLRTIQDAVVENNIVAGNSRGFFIYDAEYNTLRGNLLVDNIVGVHLW
HCCCEEECCCCCEEEEEHHHHHHCCCEEECCCCEEEEEECCCCEEECCEEEECEEEEEEE
AGSKNNQVERNDFVANREQVRYVGARDELWGIKEGNHWSNYLGWDRNGDGVGDVRYEAND
ECCCCCCCCCHHHHCCHHHEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEECHHH
LVDRLSWKHPLMKLLLASPAVQTLRLVGQQFPLLRAPSVVDPKPRMRPDKDNWRDWRGKT
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCC
FPGAR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]