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The map label for this gene is norB [H]

Identifier: 119899379

GI number: 119899379

Start: 3396487

End: 3397866

Strand: Direct

Name: norB [H]

Synonym: azo3089

Alternate gene names: 119899379

Gene position: 3396487-3397866 (Clockwise)

Preceding gene: 119899378

Following gene: 119899380

Centisome position: 77.62

GC content: 63.84

Gene sequence:

>1380_bases
ATGCAATACACATCACAAGCGGTCGCCAAGCCCTACTTCGTGGCGGCCATCGGCCTCTTCGTCGGGCAGATCCTGTTCGG
CCTGATCATGGGCCTGCAGTACGTGGTGGGGGATTTCCTCTTCCCCGCGCTGCCCTTCAACGTCGCCCGCATGGTGCACA
CCAACCTGCTGATCGTCTGGCTGCTGTTCGGCTTCATGGGCGCGGCCTACTACATGGTGCCGGAGGAATCCGAAACCGAG
CTGTGGAGCCCCAGGCTGGCGCTGGTGCTGTTCTGGGTCTTCCTCGCCGCCGGCGCGCTCACCATCCTCGGCTACCTGTT
CGTGCCCTACGCCAGGCTCGCCGAGATGACCGGCAACGACATCCTGGCGACCATGGGGCGCGAGTTCCTGGAGCAGCCGC
TGATCACCAAGATCGGCATCGTGGTGGTGGCGCTCGCCTTCCTGTTCAACATCACCATGACCATGCTGCGCGGGCGCAAG
ACGGCAATCAGCATGGTGCTGCTGCTCGGGCTGTGGGGGCTGGCGATCTTCTTCCTGTTCTCCTTCGTCAATCCGCACAA
CCTGGTGCGCGACAAGTTCTACTGGTGGTGGGTGGTGCACCTGTGGGTGGAAGGCGTGTGGGAGCTGATCCTCGGCGCAC
TGCTGGCCTTCGTGCTGATCAAGGTCACCGGGGTGGACCGCGAGGTCATCGAGAAATGGCTGTACGTCATCATCACGCTG
ACGCTGGTCACCGGCATCATCGGCACCGGCCACCACTACTACTGGATCGGCGCGCCGGAATACTGGCAGTGGTGGGGTTC
GATCTTCTCCGCGCTGGAGCCGATTCCCTTCTTCGCGATGACGGTGTTCGCCTTCAACATGGTCAACCGCCGCCGCCGCG
AACATCCCAACCGCGCCGCCACGCTGTGGGCGCTGGGCACCGGGGTGATGGCCTTCCTCGGCGCCGGGGTGTGGGGCTTC
CTGCACACGCTGGCCCCGGTGAACTTCTACACCCACGGCAGCCAGATCACCGCCGCGCACGGCCACATGGCCTTCTACGG
CGCCTACGTGATGGTGGTGCTGTGCATCATCAGCTATGCGATGCCCATCCTGCGCGGCCGCGCCGCCAACTCCAACAAGG
CGCAGGTGATGGAAATGTGGGCGTTCTGGCTGATGACGATCGCGATGGTGTTCATCACGCTGTTCCTCACCGCCGCCGGC
ATCCTGCAGGTGTGGCTGCAGCGCGTCTCCGACACGCCGCTGTCCTTCATGGCGACGCAGGACCAGATCTCGCTGTTCTA
CTGGATGCGTGAAGCCTCCGGCGTGATCTTCCTGATCGGCCTGCTGATCTACCTCGCGAGCTTCTTCGTGAAGGGCGACA
AGAAGGCGGTGGCGGCCTGA

Upstream 100 bases:

>100_bases
GACCTCGTCGCCTTCCTGAAGTACGCCTCCGAGATCAACTCGGCCAAGTGGCCGCCCAACATCGAAGGCTGACCGCCCGC
GTCCGCAAGGAGAACACTCA

Downstream 100 bases:

>100_bases
TCCCGAACGGCCGTCGCCAACACCCGAAGGGGCGGCGACGGCCGCCCCTTTTTCGTTCAGAGGCCACGACCATGGCGAGG
AAATTTCCGCTCCACCCCGC

Product: putative nitric-oxide reductase subunit B

Products: NA

Alternate protein names: NOR large subunit; Nitric oxide reductase cytochrome b subunit [H]

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MQYTSQAVAKPYFVAAIGLFVGQILFGLIMGLQYVVGDFLFPALPFNVARMVHTNLLIVWLLFGFMGAAYYMVPEESETE
LWSPRLALVLFWVFLAAGALTILGYLFVPYARLAEMTGNDILATMGREFLEQPLITKIGIVVVALAFLFNITMTMLRGRK
TAISMVLLLGLWGLAIFFLFSFVNPHNLVRDKFYWWWVVHLWVEGVWELILGALLAFVLIKVTGVDREVIEKWLYVIITL
TLVTGIIGTGHHYYWIGAPEYWQWWGSIFSALEPIPFFAMTVFAFNMVNRRRREHPNRAATLWALGTGVMAFLGAGVWGF
LHTLAPVNFYTHGSQITAAHGHMAFYGAYVMVVLCIISYAMPILRGRAANSNKAQVMEMWAFWLMTIAMVFITLFLTAAG
ILQVWLQRVSDTPLSFMATQDQISLFYWMREASGVIFLIGLLIYLASFFVKGDKKAVAA

Sequences:

>Translated_459_residues
MQYTSQAVAKPYFVAAIGLFVGQILFGLIMGLQYVVGDFLFPALPFNVARMVHTNLLIVWLLFGFMGAAYYMVPEESETE
LWSPRLALVLFWVFLAAGALTILGYLFVPYARLAEMTGNDILATMGREFLEQPLITKIGIVVVALAFLFNITMTMLRGRK
TAISMVLLLGLWGLAIFFLFSFVNPHNLVRDKFYWWWVVHLWVEGVWELILGALLAFVLIKVTGVDREVIEKWLYVIITL
TLVTGIIGTGHHYYWIGAPEYWQWWGSIFSALEPIPFFAMTVFAFNMVNRRRREHPNRAATLWALGTGVMAFLGAGVWGF
LHTLAPVNFYTHGSQITAAHGHMAFYGAYVMVVLCIISYAMPILRGRAANSNKAQVMEMWAFWLMTIAMVFITLFLTAAG
ILQVWLQRVSDTPLSFMATQDQISLFYWMREASGVIFLIGLLIYLASFFVKGDKKAVAA
>Mature_459_residues
MQYTSQAVAKPYFVAAIGLFVGQILFGLIMGLQYVVGDFLFPALPFNVARMVHTNLLIVWLLFGFMGAAYYMVPEESETE
LWSPRLALVLFWVFLAAGALTILGYLFVPYARLAEMTGNDILATMGREFLEQPLITKIGIVVVALAFLFNITMTMLRGRK
TAISMVLLLGLWGLAIFFLFSFVNPHNLVRDKFYWWWVVHLWVEGVWELILGALLAFVLIKVTGVDREVIEKWLYVIITL
TLVTGIIGTGHHYYWIGAPEYWQWWGSIFSALEPIPFFAMTVFAFNMVNRRRREHPNRAATLWALGTGVMAFLGAGVWGF
LHTLAPVNFYTHGSQITAAHGHMAFYGAYVMVVLCIISYAMPILRGRAANSNKAQVMEMWAFWLMTIAMVFITLFLTAAG
ILQVWLQRVSDTPLSFMATQDQISLFYWMREASGVIFLIGLLIYLASFFVKGDKKAVAA

Specific function: Component of the anaerobic respiratory chain that transforms nitrate to dinitrogen (denitrification). NorB is the catalytic subunit of the enzyme complex. Shows proton pump activity across the membrane in denitrifying bacterial cells. The mononitrogen red

COG id: COG3256

COG function: function code P; Nitric oxide reductase large subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.7.99.7 [H]

Molecular weight: Translated: 51917; Mature: 51917

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYTSQAVAKPYFVAAIGLFVGQILFGLIMGLQYVVGDFLFPALPFNVARMVHTNLLIVW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
LLFGFMGAAYYMVPEESETELWSPRLALVLFWVFLAAGALTILGYLFVPYARLAEMTGND
HHHHHHHHEEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ILATMGREFLEQPLITKIGIVVVALAFLFNITMTMLRGRKTAISMVLLLGLWGLAIFFLF
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
SFVNPHNLVRDKFYWWWVVHLWVEGVWELILGALLAFVLIKVTGVDREVIEKWLYVIITL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
TLVTGIIGTGHHYYWIGAPEYWQWWGSIFSALEPIPFFAMTVFAFNMVNRRRREHPNRAA
HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHH
TLWALGTGVMAFLGAGVWGFLHTLAPVNFYTHGSQITAAHGHMAFYGAYVMVVLCIISYA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHH
MPILRGRAANSNKAQVMEMWAFWLMTIAMVFITLFLTAAGILQVWLQRVSDTPLSFMATQ
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCH
DQISLFYWMREASGVIFLIGLLIYLASFFVKGDKKAVAA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHCCC
>Mature Secondary Structure
MQYTSQAVAKPYFVAAIGLFVGQILFGLIMGLQYVVGDFLFPALPFNVARMVHTNLLIVW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
LLFGFMGAAYYMVPEESETELWSPRLALVLFWVFLAAGALTILGYLFVPYARLAEMTGND
HHHHHHHHEEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ILATMGREFLEQPLITKIGIVVVALAFLFNITMTMLRGRKTAISMVLLLGLWGLAIFFLF
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
SFVNPHNLVRDKFYWWWVVHLWVEGVWELILGALLAFVLIKVTGVDREVIEKWLYVIITL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
TLVTGIIGTGHHYYWIGAPEYWQWWGSIFSALEPIPFFAMTVFAFNMVNRRRREHPNRAA
HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHH
TLWALGTGVMAFLGAGVWGFLHTLAPVNFYTHGSQITAAHGHMAFYGAYVMVVLCIISYA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHH
MPILRGRAANSNKAQVMEMWAFWLMTIAMVFITLFLTAAGILQVWLQRVSDTPLSFMATQ
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCH
DQISLFYWMREASGVIFLIGLLIYLASFFVKGDKKAVAA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7508388; 2542222; 9521721 [H]