Click here to switch to the map view.

The map label for this gene is ychQ [C]

Identifier: 119899373

GI number: 119899373

Start: 3392619

End: 3393011

Strand: Reverse

Name: ychQ [C]

Synonym: azo3083

Alternate gene names: 119899373

Gene position: 3393011-3392619 (Counterclockwise)

Preceding gene: 119899375

Following gene: 119899371

Centisome position: 77.54

GC content: 70.23

Gene sequence:

>393_bases
ATGTACATGGCAATCAAGCACATCCACCTCCTCTGCGTCGCCCTGAGCGGCCTCGGGTTCTTGCTGCGCGGGCTATGGGT
ACTCGCCCGCGGCGGCCTGCCGCGCTGGCTGCCCGTGCGGGTGCTGCCGCACGTGGTGGACACCCTGCTGCTGGCCAGCG
CGATCGCGCTGGCGGTGATGAGCAGCCAGTACCCGCCGCACTCCACCTGGATAACGGCGAAGATCGTGGGGCTGCTGGTG
TACATCGGGCTGGGCACGGTGGCGCTGAAGCGCGGGCGCACGCAGGGCGTGAGGGCGGTGGCATTTGTGGGCGCGCTGGC
GGTGTTTGGGTGGATCGTGTCGGTGGCGCTGACGCGGAATCCGGCGGGGTATCTGGCGGGGGGGGCGGGGTAG

Upstream 100 bases:

>100_bases
CGGCCATCGGGGCAAGCCTGTTGTGGGTATGTCTGGATTCTAGCCCATCGCCCCTGGCACCCGCCCGCGGCACCGCCGCA
TCCCCCCGGAGAACGATCGA

Downstream 100 bases:

>100_bases
GACACGCGGTTCCGTTCCCTCCCCTTCAAGGGGGCGTAGGCGGGGTTTCGCAGAGCACTGCTCTGCGCCGCCGGAGCGGC
GAAGCGAAGCGGAGACTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: SirB Family Protein; Transcriptional Regulator

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MYMAIKHIHLLCVALSGLGFLLRGLWVLARGGLPRWLPVRVLPHVVDTLLLASAIALAVMSSQYPPHSTWITAKIVGLLV
YIGLGTVALKRGRTQGVRAVAFVGALAVFGWIVSVALTRNPAGYLAGGAG

Sequences:

>Translated_130_residues
MYMAIKHIHLLCVALSGLGFLLRGLWVLARGGLPRWLPVRVLPHVVDTLLLASAIALAVMSSQYPPHSTWITAKIVGLLV
YIGLGTVALKRGRTQGVRAVAFVGALAVFGWIVSVALTRNPAGYLAGGAG
>Mature_130_residues
MYMAIKHIHLLCVALSGLGFLLRGLWVLARGGLPRWLPVRVLPHVVDTLLLASAIALAVMSSQYPPHSTWITAKIVGLLV
YIGLGTVALKRGRTQGVRAVAFVGALAVFGWIVSVALTRNPAGYLAGGAG

Specific function: Unknown

COG id: COG3094

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787464, Length=121, Percent_Identity=38.0165289256198, Blast_Score=62, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13723; Mature: 13723

Theoretical pI: Translated: 11.81; Mature: 11.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMAIKHIHLLCVALSGLGFLLRGLWVLARGGLPRWLPVRVLPHVVDTLLLASAIALAVM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SSQYPPHSTWITAKIVGLLVYIGLGTVALKRGRTQGVRAVAFVGALAVFGWIVSVALTRN
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PAGYLAGGAG
CCCCCCCCCC
>Mature Secondary Structure
MYMAIKHIHLLCVALSGLGFLLRGLWVLARGGLPRWLPVRVLPHVVDTLLLASAIALAVM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SSQYPPHSTWITAKIVGLLVYIGLGTVALKRGRTQGVRAVAFVGALAVFGWIVSVALTRN
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PAGYLAGGAG
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA