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The map label for this gene is oruR2 [H]

Identifier: 119899372

GI number: 119899372

Start: 3391123

End: 3392256

Strand: Direct

Name: oruR2 [H]

Synonym: azo3082

Alternate gene names: 119899372

Gene position: 3391123-3392256 (Clockwise)

Preceding gene: 119899370

Following gene: 119899374

Centisome position: 77.49

GC content: 70.55

Gene sequence:

>1134_bases
ATGGTTGCAAATCCTGCCGCCTCGGCTAGCATCGCCCGCAGCATGAAAACCGCCCTCGCCCCTACCCTCGCATTGCCGGT
CGGCCCCGGTGTCGATCCGACGCGCGGCGCCGCTGCCACGCCCATCGCCTTCATCCGCGCCATCGTGGATGCCTATCGCG
GCTACGGCACCGATCCGGCCAACGCGCTGCGGCTGGCACAGATTACGCCGCAGCGGCTGGCCGACGACAGCGCCCACGTC
ACCGCGCTGCAGCTGGAGATCATGTCCGCGGTGGCGATGCAGGAACTCGACGACGAGGCGTTGGGCTGGTTCTCGCGCCG
CCTGCCCTGGGGCAGCTACGGCATGCTGTGCCGCGCCTCGCTCGGCGCGCCCGACCTCGGCGTGGCGATCAAGCGCTGGT
GCCGCCACCACCGCCTGCTGACCGACGACGTGCTGCTGCACCTCAAGGTCACCAAAAGCGCCGCGACGATCACGCTGGAA
CGGCGACTGGAGCCGCCCGCGCTCACCGCCGGCATGCGCGAATTCTGCTGCGTCACCCTGCTGCGCTACCTGCTCGGCTA
CGCCTGCTGGGCGGTGGATTCGCGCATTCCGCTGCAGGCTGCGCACTTCCCGTATCCGCGGCCGGAGCACCACGCGGTGT
ATCCGCTGCTGTTCGCCGGGCCGGTGGAGTTTGACGCCGACTGCGCCGGCATCCGCTTCGACCCGCAATACCTGACGCTG
CCCCTCCGGCGCGACGAACGCGCGCTGCGCACCATGCTGCAACGCGCGCTGCCGCTCACCGTGCTGCAGTACCGCCGCGA
CCGCCTGCTGGTGCAGCGGGTGCGCGAGCTGCTGCGCACCCTCACCCGCGACGGCGGCGGCGAATCGCTCACCGCCGACA
GCGTCGCCGCGCACCTGCACCTGTCCGCCCGCACCCTGCACCGGCAACTGCAGGAAGAGGGCGCGGCGCTGCAGCAGTTG
AAGGACGAAGCGCGCCGCGAACGCGCCATCGAACTGCTGAACCGCAGCAACCGCCCGGTGAAGCAGATTGCGCTGGCGGT
GGGGTTTCGCAATGAGAAGAGCTTTGCGCGGGCGTTCCGGGAGTGGACGGGGGAATCGCCGAGCGGGTTTCGGGGGAGAC
GGGCGGGGGAGTGA

Upstream 100 bases:

>100_bases
ATCGCGTGTCTCCTCGTTCTGTAGGGTGCCCGCCGCGGCGAAGGCACGGCGGGACGGATGGCCCGAGCGTAATCCAGCCC
TTGGCGCAACGGGCGCCAAG

Downstream 100 bases:

>100_bases
GATTTGTTCCCACCCTTCAAGGCGTGGGGGGACGTAGGTTTTGTCCCCTCCCCTTCAAGGCGTTGGGGGGAAGCAGGTTT
TGTCCCCTCCCCTTCAAAGC

Product: putative ornithine utilization regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MVANPAASASIARSMKTALAPTLALPVGPGVDPTRGAAATPIAFIRAIVDAYRGYGTDPANALRLAQITPQRLADDSAHV
TALQLEIMSAVAMQELDDEALGWFSRRLPWGSYGMLCRASLGAPDLGVAIKRWCRHHRLLTDDVLLHLKVTKSAATITLE
RRLEPPALTAGMREFCCVTLLRYLLGYACWAVDSRIPLQAAHFPYPRPEHHAVYPLLFAGPVEFDADCAGIRFDPQYLTL
PLRRDERALRTMLQRALPLTVLQYRRDRLLVQRVRELLRTLTRDGGGESLTADSVAAHLHLSARTLHRQLQEEGAALQQL
KDEARRERAIELLNRSNRPVKQIALAVGFRNEKSFARAFREWTGESPSGFRGRRAGE

Sequences:

>Translated_377_residues
MVANPAASASIARSMKTALAPTLALPVGPGVDPTRGAAATPIAFIRAIVDAYRGYGTDPANALRLAQITPQRLADDSAHV
TALQLEIMSAVAMQELDDEALGWFSRRLPWGSYGMLCRASLGAPDLGVAIKRWCRHHRLLTDDVLLHLKVTKSAATITLE
RRLEPPALTAGMREFCCVTLLRYLLGYACWAVDSRIPLQAAHFPYPRPEHHAVYPLLFAGPVEFDADCAGIRFDPQYLTL
PLRRDERALRTMLQRALPLTVLQYRRDRLLVQRVRELLRTLTRDGGGESLTADSVAAHLHLSARTLHRQLQEEGAALQQL
KDEARRERAIELLNRSNRPVKQIALAVGFRNEKSFARAFREWTGESPSGFRGRRAGE
>Mature_377_residues
MVANPAASASIARSMKTALAPTLALPVGPGVDPTRGAAATPIAFIRAIVDAYRGYGTDPANALRLAQITPQRLADDSAHV
TALQLEIMSAVAMQELDDEALGWFSRRLPWGSYGMLCRASLGAPDLGVAIKRWCRHHRLLTDDVLLHLKVTKSAATITLE
RRLEPPALTAGMREFCCVTLLRYLLGYACWAVDSRIPLQAAHFPYPRPEHHAVYPLLFAGPVEFDADCAGIRFDPQYLTL
PLRRDERALRTMLQRALPLTVLQYRRDRLLVQRVRELLRTLTRDGGGESLTADSVAAHLHLSARTLHRQLQEEGAALQQL
KDEARRERAIELLNRSNRPVKQIALAVGFRNEKSFARAFREWTGESPSGFRGRRAGE

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 41891; Mature: 41891

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVANPAASASIARSMKTALAPTLALPVGPGVDPTRGAAATPIAFIRAIVDAYRGYGTDPA
CCCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHH
NALRLAQITPQRLADDSAHVTALQLEIMSAVAMQELDDEALGWFSRRLPWGSYGMLCRAS
HHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHC
LGAPDLGVAIKRWCRHHRLLTDDVLLHLKVTKSAATITLERRLEPPALTAGMREFCCVTL
CCCCCHHHHHHHHHHHCCCCCCHHEEEEEEECCCEEEEHHHCCCCCHHHHHHHHHHHHHH
LRYLLGYACWAVDSRIPLQAAHFPYPRPEHHAVYPLLFAGPVEFDADCAGIRFDPQYLTL
HHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCEEEE
PLRRDERALRTMLQRALPLTVLQYRRDRLLVQRVRELLRTLTRDGGGESLTADSVAAHLH
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LSARTLHRQLQEEGAALQQLKDEARRERAIELLNRSNRPVKQIALAVGFRNEKSFARAFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHH
EWTGESPSGFRGRRAGE
HHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVANPAASASIARSMKTALAPTLALPVGPGVDPTRGAAATPIAFIRAIVDAYRGYGTDPA
CCCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHH
NALRLAQITPQRLADDSAHVTALQLEIMSAVAMQELDDEALGWFSRRLPWGSYGMLCRAS
HHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHC
LGAPDLGVAIKRWCRHHRLLTDDVLLHLKVTKSAATITLERRLEPPALTAGMREFCCVTL
CCCCCHHHHHHHHHHHCCCCCCHHEEEEEEECCCEEEEHHHCCCCCHHHHHHHHHHHHHH
LRYLLGYACWAVDSRIPLQAAHFPYPRPEHHAVYPLLFAGPVEFDADCAGIRFDPQYLTL
HHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCEEEE
PLRRDERALRTMLQRALPLTVLQYRRDRLLVQRVRELLRTLTRDGGGESLTADSVAAHLH
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LSARTLHRQLQEEGAALQQLKDEARRERAIELLNRSNRPVKQIALAVGFRNEKSFARAFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHH
EWTGESPSGFRGRRAGE
HHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]