| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is 119899318
Identifier: 119899318
GI number: 119899318
Start: 3329491
End: 3330198
Strand: Direct
Name: 119899318
Synonym: azo3028
Alternate gene names: NA
Gene position: 3329491-3330198 (Clockwise)
Preceding gene: 119899317
Following gene: 119899319
Centisome position: 76.08
GC content: 70.9
Gene sequence:
>708_bases ATGGCGCAGACGCGGCCCGCGCAATGGGGCCGCCTGCGCCGCGTCGCGGCGGCGCTGGCGTGTGCCGGCGCCGCCACCGC GCTGGCGGCCGACCTGCGGATGGTGGCGCCGCTGGGGGGCAGCCTGAGCGTGCCGACCGTGAGCCTGCGCGAAGCGCGCT TCGTCACCACGCTGCGCCAGCAGTACGACTTCTCCTGCGGGTCGGCCGCGGTGGCAACGCTGCTGACCCATCACTACGGC CACCCGGTGAACGAAGCGCAGGTGTTCCAGGTGATGTACGCCAGCGGCGACCAGGCCAAGATCCGCCGCGAAGGCTTCTC GATGCTGGACATGAAGCGCTACCTCGACCAGCTCGGCTTCATCACCGAGGGCGTGGAGGCCACGCTGGACCAGCTCGCCG CGGTGGGCGTGCCGGCGATCGCGTTGATCCAGGAGCACGGCTACGCGCATTTCGTGGTGGTGAAGGGGCTGCGCAACGCG AGCGTGCTGCTCGGCGACCCGGCGATGGGCACCCGCGTCGTCAGCCGGACGGATTTCGAGCGCAACTGGCGCAGCGGCAT CCTGCTGGTGGTGAACAACAACGTGGACCGCGCCCGCTTCAACCAGGAGGTCGACTGGCGGGTGCGCCCGCGCGCCCCGT TGGCGCGCGGACTGGACAACAACACGGCGGACGTGCAGTTGCTGCAGCGCGCCCCATCGGACCATTGA
Upstream 100 bases:
>100_bases CGCGCTGGCGGGCTCGTCCGGCATGCCGATGCTGATCCAGAACACCGGCAACGGTGTGCTGATCCAGAACGCGGTGATCC TGAACGTGGAGGTGAAGTAG
Downstream 100 bases:
>100_bases AAGGACGATCGCCATGCAGACCGCCCGCATCGCGCTGCTGCTGGCCGCACTCGGCGGACTGGGCGTGGGCGCCGCACGCG CCCTGGTGGAGCAGGCCGAG
Product: peptidase
Products: NA
Alternate protein names: Double-Glycine Peptidase; C39 Family Peptidase; Periplasmic Protein; Bacteriocin Processing Protein Peptidase; Peptidase Protein; Cysteine Peptidase Family C
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MAQTRPAQWGRLRRVAAALACAGAATALAADLRMVAPLGGSLSVPTVSLREARFVTTLRQQYDFSCGSAAVATLLTHHYG HPVNEAQVFQVMYASGDQAKIRREGFSMLDMKRYLDQLGFITEGVEATLDQLAAVGVPAIALIQEHGYAHFVVVKGLRNA SVLLGDPAMGTRVVSRTDFERNWRSGILLVVNNNVDRARFNQEVDWRVRPRAPLARGLDNNTADVQLLQRAPSDH
Sequences:
>Translated_235_residues MAQTRPAQWGRLRRVAAALACAGAATALAADLRMVAPLGGSLSVPTVSLREARFVTTLRQQYDFSCGSAAVATLLTHHYG HPVNEAQVFQVMYASGDQAKIRREGFSMLDMKRYLDQLGFITEGVEATLDQLAAVGVPAIALIQEHGYAHFVVVKGLRNA SVLLGDPAMGTRVVSRTDFERNWRSGILLVVNNNVDRARFNQEVDWRVRPRAPLARGLDNNTADVQLLQRAPSDH >Mature_234_residues AQTRPAQWGRLRRVAAALACAGAATALAADLRMVAPLGGSLSVPTVSLREARFVTTLRQQYDFSCGSAAVATLLTHHYGH PVNEAQVFQVMYASGDQAKIRREGFSMLDMKRYLDQLGFITEGVEATLDQLAAVGVPAIALIQEHGYAHFVVVKGLRNAS VLLGDPAMGTRVVSRTDFERNWRSGILLVVNNNVDRARFNQEVDWRVRPRAPLARGLDNNTADVQLLQRAPSDH
Specific function: Unknown
COG id: COG3271
COG function: function code R; Predicted double-glycine peptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25720; Mature: 25589
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS50990 PEPTIDASE_C39
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTRPAQWGRLRRVAAALACAGAATALAADLRMVAPLGGSLSVPTVSLREARFVTTLRQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHH QYDFSCGSAAVATLLTHHYGHPVNEAQVFQVMYASGDQAKIRREGFSMLDMKRYLDQLGF HHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHH ITEGVEATLDQLAAVGVPAIALIQEHGYAHFVVVKGLRNASVLLGDPAMGTRVVSRTDFE HHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCHHHHHCCCC RNWRSGILLVVNNNVDRARFNQEVDWRVRPRAPLARGLDNNTADVQLLQRAPSDH CCCCCCEEEEEECCCCHHHCCCCCCEEECCCCHHHHCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure AQTRPAQWGRLRRVAAALACAGAATALAADLRMVAPLGGSLSVPTVSLREARFVTTLRQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHH QYDFSCGSAAVATLLTHHYGHPVNEAQVFQVMYASGDQAKIRREGFSMLDMKRYLDQLGF HHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHH ITEGVEATLDQLAAVGVPAIALIQEHGYAHFVVVKGLRNASVLLGDPAMGTRVVSRTDFE HHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCHHHHHCCCC RNWRSGILLVVNNNVDRARFNQEVDWRVRPRAPLARGLDNNTADVQLLQRAPSDH CCCCCCEEEEEECCCCHHHCCCCCCEEECCCCHHHHCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA