| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is exaA2 [H]
Identifier: 119899262
GI number: 119899262
Start: 3261821
End: 3263698
Strand: Direct
Name: exaA2 [H]
Synonym: azo2972
Alternate gene names: 119899262
Gene position: 3261821-3263698 (Clockwise)
Preceding gene: 119899258
Following gene: 119899263
Centisome position: 74.54
GC content: 67.25
Gene sequence:
>1878_bases ATGAGAACCAAGCAACCCGCGCCCCGGCTGCGCATGACCGTCGCCGCGCTCGCCGCCGCGCTTGCGCTGCCCGTCGCAGC CGCCAGCAACGTCACGTGGGACGACATCGCCAACGACGACAAGACCACCGGCGACGTGCTGTCCTACGGCCTCGGCCTCA AGGCGCAGCGCCACAGCACCTTGAAGCAGGTGAACACGAAGAACGTCGCCGGCCTGGTGCCGGCGTGGACCTTCTCCTTC GGCGGCGAGAAGCAGCGCGGCCAGGAAGGCCAGGTGCTGGTGCATGACGGGGTGATCTACGCCACCGCGTCGTACTCGCG CTTCTTCGCCATCGACGCCCGCAGCGGCAAGCGCCTGTGGGAATACGAGCATCGCCTGCCCGACGACATCCGCCCCTGCT GCGACGTGGTCAACCGCGGCCCGGCGATCTACGGCGACAAGGTGTTCTTCGGCACGCTGGACGCCTCCATCGTCGCGCTC GACAAGAACACCGGCAAGGTGGCGTGGAAGAAGAAGTTCGCCGACCACAAGGTCGGCTACACCATGACCGGCGCTCCCTT CATCGTGAAGGACCAGAAGAGCGGCAAGATCCTGCTGGTGCACGGCTCCTCCGGCGACGAGTTCGGCGTGGTCGGCTGGC TGTATGCGCGCGACCCGGACACCGGCGAGGAAGTGTGGGCGCGGCCGCTGGTCGAAGGCCACGTGGGCCGACTCAACGGC AAGGACAGCACGCCCACCGGCGACGCCAAGGCGCCGTCGTGGCCGAACGACCCGAACTCCCCCACCGGCAAGGTCGAGGC CTGGAGCCACGGCGGCGGCGCGCCCTGGCAGACCGCCAGCTTCGATGCCGAGAACAACACCATCGTCATCGGCGCCGGCA ACCCCGCGCCGTGGAACACCTGGAAGCGCACCGCGCAGGGCGACGATCCGCAGAACTGGGACAACCTGTTCACCTCCGGC CAGGCTTACGTGGATGCTAGCACCGGCGAGCTGAAGGGCTTCTACCAGCACACCCCGAACGACGCCTGGGACTTCTCCGG CAACAACTCCATCATCCTGTTCGAATACAAGGACCCGAAGACCGGCAAGCAGGTAAAGGCCTCGGCGCATGCCGACCGCA ACGGCTTCTTCTTCGTCACCGACCGCGACAAGCTCGCCAACGGCGCCGGCTACCCCAACAAGCCGACCTCGCTGATCGGC GCCTGGCCCTTCGTCGATGGCATCACCTGGGCGTCGGGCTTCGACCTCAAGACCGGCAAGCCGATCGAGAAGGGCAACCG GCCGCCCGCGCCCAAGGAAGGCGCCGACAAGGGCGACTCGGTGTTCGTCTCGCCGCCCTTCCTCGGCGGCACCAACTGGC ATCCGATGTCGTACAGCCCGGACACCGGCCTGTTCTACATCCCGGCCAACCACTGGGCGATGGACTACTGGACCGAGCAC CTGACCTACAAGGCCGGCTCCGCCTATCTCGGTCAGGGCTTCCGCATCAAGCGCCTGTTCGACGACCACGTCGGCGTGCT GCGCGCGATCGACCCCAAGAGCGGCAAGATCGCCTGGGAGCACAAGGAGAAATTCCCGCTGTGGGCCGGCACGCTGACCA CCGCCGGCGGGCTGATCTTCACCGGCACCTCGGACGGCTACGTGAAGGCCTTCGACGCGAAGAACGGCAAGGAGCTGTGG TCCTTCCAGACCGGTTCCGGCGTGGTCTCGGTGCCGGTGACCTGGGAGATGGACGGCGAGCAGTACATCGGCATCCAGTC CGGCTACGGTGGCGCGGTGCCGCTGTGGGGCGGCGACATGGCCGACCTCACCAAGCAGGTCACCCAGGGCGGTTCGATGT GGGTGTTCAAGCTGCCCCGGCAGGTGGCCAGCAAGTAA
Upstream 100 bases:
>100_bases CCCGCGACCGCCGCCGCGGCCGGCCGACATACTGCGGCCGCCATCCGGAGCCGGGCCCACCCGCCTCCGATGCCCATCAC ACAGGAGGCAAGGAGCCACA
Downstream 100 bases:
>100_bases GCCCCAGAGGCAGGCCCAAGGCGGTCCGGCGGCAACGCCGGGCCGCACTCCGCCAACCGCCCGCGGCGCCTCCCCGCCGC GGGCACTCACACCCGAACCG
Product: ExaA2 protein
Products: NA
Alternate protein names: QEDH [H]
Number of amino acids: Translated: 625; Mature: 625
Protein sequence:
>625_residues MRTKQPAPRLRMTVAALAAALALPVAAASNVTWDDIANDDKTTGDVLSYGLGLKAQRHSTLKQVNTKNVAGLVPAWTFSF GGEKQRGQEGQVLVHDGVIYATASYSRFFAIDARSGKRLWEYEHRLPDDIRPCCDVVNRGPAIYGDKVFFGTLDASIVAL DKNTGKVAWKKKFADHKVGYTMTGAPFIVKDQKSGKILLVHGSSGDEFGVVGWLYARDPDTGEEVWARPLVEGHVGRLNG KDSTPTGDAKAPSWPNDPNSPTGKVEAWSHGGGAPWQTASFDAENNTIVIGAGNPAPWNTWKRTAQGDDPQNWDNLFTSG QAYVDASTGELKGFYQHTPNDAWDFSGNNSIILFEYKDPKTGKQVKASAHADRNGFFFVTDRDKLANGAGYPNKPTSLIG AWPFVDGITWASGFDLKTGKPIEKGNRPPAPKEGADKGDSVFVSPPFLGGTNWHPMSYSPDTGLFYIPANHWAMDYWTEH LTYKAGSAYLGQGFRIKRLFDDHVGVLRAIDPKSGKIAWEHKEKFPLWAGTLTTAGGLIFTGTSDGYVKAFDAKNGKELW SFQTGSGVVSVPVTWEMDGEQYIGIQSGYGGAVPLWGGDMADLTKQVTQGGSMWVFKLPRQVASK
Sequences:
>Translated_625_residues MRTKQPAPRLRMTVAALAAALALPVAAASNVTWDDIANDDKTTGDVLSYGLGLKAQRHSTLKQVNTKNVAGLVPAWTFSF GGEKQRGQEGQVLVHDGVIYATASYSRFFAIDARSGKRLWEYEHRLPDDIRPCCDVVNRGPAIYGDKVFFGTLDASIVAL DKNTGKVAWKKKFADHKVGYTMTGAPFIVKDQKSGKILLVHGSSGDEFGVVGWLYARDPDTGEEVWARPLVEGHVGRLNG KDSTPTGDAKAPSWPNDPNSPTGKVEAWSHGGGAPWQTASFDAENNTIVIGAGNPAPWNTWKRTAQGDDPQNWDNLFTSG QAYVDASTGELKGFYQHTPNDAWDFSGNNSIILFEYKDPKTGKQVKASAHADRNGFFFVTDRDKLANGAGYPNKPTSLIG AWPFVDGITWASGFDLKTGKPIEKGNRPPAPKEGADKGDSVFVSPPFLGGTNWHPMSYSPDTGLFYIPANHWAMDYWTEH LTYKAGSAYLGQGFRIKRLFDDHVGVLRAIDPKSGKIAWEHKEKFPLWAGTLTTAGGLIFTGTSDGYVKAFDAKNGKELW SFQTGSGVVSVPVTWEMDGEQYIGIQSGYGGAVPLWGGDMADLTKQVTQGGSMWVFKLPRQVASK >Mature_625_residues MRTKQPAPRLRMTVAALAAALALPVAAASNVTWDDIANDDKTTGDVLSYGLGLKAQRHSTLKQVNTKNVAGLVPAWTFSF GGEKQRGQEGQVLVHDGVIYATASYSRFFAIDARSGKRLWEYEHRLPDDIRPCCDVVNRGPAIYGDKVFFGTLDASIVAL DKNTGKVAWKKKFADHKVGYTMTGAPFIVKDQKSGKILLVHGSSGDEFGVVGWLYARDPDTGEEVWARPLVEGHVGRLNG KDSTPTGDAKAPSWPNDPNSPTGKVEAWSHGGGAPWQTASFDAENNTIVIGAGNPAPWNTWKRTAQGDDPQNWDNLFTSG QAYVDASTGELKGFYQHTPNDAWDFSGNNSIILFEYKDPKTGKQVKASAHADRNGFFFVTDRDKLANGAGYPNKPTSLIG AWPFVDGITWASGFDLKTGKPIEKGNRPPAPKEGADKGDSVFVSPPFLGGTNWHPMSYSPDTGLFYIPANHWAMDYWTEH LTYKAGSAYLGQGFRIKRLFDDHVGVLRAIDPKSGKIAWEHKEKFPLWAGTLTTAGGLIFTGTSDGYVKAFDAKNGKELW SFQTGSGVVSVPVTWEMDGEQYIGIQSGYGGAVPLWGGDMADLTKQVTQGGSMWVFKLPRQVASK
Specific function: Catalyzes the oxidation of primary alcohols except for methanol that is a very poor substrate [H]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial PQQ dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=385, Percent_Identity=24.1558441558442, Blast_Score=82, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR017512 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: =1.1.2.8 [H]
Molecular weight: Translated: 67982; Mature: 67982
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: PS00364 BACTERIAL_PQQ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTKQPAPRLRMTVAALAAALALPVAAASNVTWDDIANDDKTTGDVLSYGLGLKAQRHST CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHCCCCCHHHHHH LKQVNTKNVAGLVPAWTFSFGGEKQRGQEGQVLVHDGVIYATASYSRFFAIDARSGKRLW HHHCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCEEEEEECCEEEEEEECCCCCHHH EYEHRLPDDIRPCCDVVNRGPAIYGDKVFFGTLDASIVALDKNTGKVAWKKKFADHKVGY HHHHCCCHHHHHHHHHHHCCCCEECCEEEEEECCEEEEEEECCCCCEEEEHHCCCCCCCE TMTGAPFIVKDQKSGKILLVHGSSGDEFGVVGWLYARDPDTGEEVWARPLVEGHVGRLNG EECCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEECCC KDSTPTGDAKAPSWPNDPNSPTGKVEAWSHGGGAPWQTASFDAENNTIVIGAGNPAPWNT CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCEEEEECCCCCCCHH WKRTAQGDDPQNWDNLFTSGQAYVDASTGELKGFYQHTPNDAWDFSGNNSIILFEYKDPK HHHCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCCC TGKQVKASAHADRNGFFFVTDRDKLANGAGYPNKPTSLIGAWPFVDGITWASGFDLKTGK CCCEEEECCCCCCCCEEEEECHHHHCCCCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCC PIEKGNRPPAPKEGADKGDSVFVSPPFLGGTNWHPMSYSPDTGLFYIPANHWAMDYWTEH CHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEEHHHHHHH LTYKAGSAYLGQGFRIKRLFDDHVGVLRAIDPKSGKIAWEHKEKFPLWAGTLTTAGGLIF HEEECCCHHHCCCEEEEEHHHCCCCEEEEECCCCCCEEEECCCCCCEEEEHHHHCCCEEE TGTSDGYVKAFDAKNGKELWSFQTGSGVVSVPVTWEMDGEQYIGIQSGYGGAVPLWGGDM ECCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEEEECCCEEEEEECCCCCEEECCCCCH ADLTKQVTQGGSMWVFKLPRQVASK HHHHHHHHCCCCEEEEECCHHHHCC >Mature Secondary Structure MRTKQPAPRLRMTVAALAAALALPVAAASNVTWDDIANDDKTTGDVLSYGLGLKAQRHST CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHCCCCCHHHHHH LKQVNTKNVAGLVPAWTFSFGGEKQRGQEGQVLVHDGVIYATASYSRFFAIDARSGKRLW HHHCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCEEEEEECCEEEEEEECCCCCHHH EYEHRLPDDIRPCCDVVNRGPAIYGDKVFFGTLDASIVALDKNTGKVAWKKKFADHKVGY HHHHCCCHHHHHHHHHHHCCCCEECCEEEEEECCEEEEEEECCCCCEEEEHHCCCCCCCE TMTGAPFIVKDQKSGKILLVHGSSGDEFGVVGWLYARDPDTGEEVWARPLVEGHVGRLNG EECCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEECCC KDSTPTGDAKAPSWPNDPNSPTGKVEAWSHGGGAPWQTASFDAENNTIVIGAGNPAPWNT CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCEEEEECCCCCCCHH WKRTAQGDDPQNWDNLFTSGQAYVDASTGELKGFYQHTPNDAWDFSGNNSIILFEYKDPK HHHCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCCC TGKQVKASAHADRNGFFFVTDRDKLANGAGYPNKPTSLIGAWPFVDGITWASGFDLKTGK CCCEEEECCCCCCCCEEEEECHHHHCCCCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCC PIEKGNRPPAPKEGADKGDSVFVSPPFLGGTNWHPMSYSPDTGLFYIPANHWAMDYWTEH CHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEEHHHHHHH LTYKAGSAYLGQGFRIKRLFDDHVGVLRAIDPKSGKIAWEHKEKFPLWAGTLTTAGGLIF HEEECCCHHHCCCEEEEEHHHCCCCEEEEECCCCCCEEEECCCCCCEEEEHHHHCCCEEE TGTSDGYVKAFDAKNGKELWSFQTGSGVVSVPVTWEMDGEQYIGIQSGYGGAVPLWGGDM ECCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEEEECCCEEEEEECCCCCEEECCCCCH ADLTKQVTQGGSMWVFKLPRQVASK HHHHHHHHCCCCEEEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9826187; 10984043; 10075429; 10736230 [H]