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The map label for this gene is ybfB [H]

Identifier: 119899250

GI number: 119899250

Start: 3250526

End: 3251743

Strand: Direct

Name: ybfB [H]

Synonym: azo2960

Alternate gene names: 119899250

Gene position: 3250526-3251743 (Clockwise)

Preceding gene: 119899249

Following gene: 119899251

Centisome position: 74.28

GC content: 70.44

Gene sequence:

>1218_bases
ATGCATCCATCACCCGGGCGCGATGCCCGCATCCTGCTGCTCCGCGGCGGCGCCATCACCATGCTGTCGCTCGGCATCCG
CCACGGCTTCGGCATCTTCCTGCGGCCGATGACGCTGGACCTGCAATGGACGCGCGAAACCTTCGCCTTCGCGATCGCAC
TGCAGAACCTGGTGTGGGGCCTGTCCCAGCCCTTCGCCGGCATGCTCGCCGACCGCCATGGCGCCGGCCGCATCCTGGCG
CTCGGCACCGCGTGCTACGCCGTCGGGCTGGCGCTGATGGCGCAGTCGACCACCGCCACCCAGCTGGCGCTGTCGGCGGG
CGTGCTGATCGGCCTCGGGCTCAGCGGCACCTACACCATCGTCATCGGCGTGGTCGGCCGCGCCTTTCCGCCGGAACGGC
GCAGCGTGGCGCTGGGCGTGCTCGGCGCGCTGGCCTCGTTCGGCCAGTTCGCCATGCTGCCCTACGGCCAGTCGCTGATC
TCCGCCGTCGGCTGGTGGTGGGCGCTGCTGGTGCTGGCGCTCAATGCCGCGCTGATGTTGCCGCTGGCACTGCCGCTGGC
GCGGGCGAAAGGGCATCCGGCCGCGCTCGCCGGCAGCGGCCAGAGCATTGCCGAGGCGCTGGGCGAAGCCTTCCGCCATC
GCGGCTTCTGGCTGGTGACGCTGGGCTTTTTCGTGTGCGGCTTCCAGATCGTGTTCGTGGCGACGCATTTCCCCGCCTAT
CTTCTCGACCAAGGGATGTCGGTCGATACCGGCATGATCGCGCTGGCGCTGATCGGGCTGGCCAACATCCCCGGCGCCTT
CCTCGCGGGCTACCTCGGCGCGCGCTATTCCAAGCGGCGTCTGCTCGTCGGCATCTACCTGGCGCGCGCGCTCATCATCG
TCGCCTTCCTCGCGGCGCCGCCCAGCCCATGGTCGGTGTATGCGTTCTCGATCGCGCTCGGGCTGGTGTGGCTGGGCACC
GTGCCGCTGACCAGCGGCATCGTCGCGCAGATCTTCGGCGTGCAGTACCTGTCGATGCTGTTCGGGGTGGTCTATCTGGG
CCACCAGATCGGTGCCTTCCTCGGCGGCTGGATCGGCGGCCTTGTCTACGACCAGACCGGTGCCTACCTGCCGGTGTGGC
TGCTGGCGGTCGGGCTCAGCCTTGCCGCGGCGGCGGCCAATCTGCTGGCGGACGAAGCGGCGCTGCCGCGGCTGCGCCCG
CTCGCGGGGCAGGCCTGA

Upstream 100 bases:

>100_bases
TTGCCGACCTCGGCCTTCGGCCCGCCGACCTTCAAGCCCTCGCCGCCGGGCTGTTCACGTCCGACGACACCCGGCGCCAA
CGCTGAACCCGGAGACCTCC

Downstream 100 bases:

>100_bases
TGAAGCGGCCCCCGCGCGCCGCGGCCCCGCTGCTGTGGCGCGCGGCAGGCTGGGCGGCCGTGCTCGCCGCGCTGGGCGTC
ATCGCCCTGGCGTATCGCCA

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MHPSPGRDARILLLRGGAITMLSLGIRHGFGIFLRPMTLDLQWTRETFAFAIALQNLVWGLSQPFAGMLADRHGAGRILA
LGTACYAVGLALMAQSTTATQLALSAGVLIGLGLSGTYTIVIGVVGRAFPPERRSVALGVLGALASFGQFAMLPYGQSLI
SAVGWWWALLVLALNAALMLPLALPLARAKGHPAALAGSGQSIAEALGEAFRHRGFWLVTLGFFVCGFQIVFVATHFPAY
LLDQGMSVDTGMIALALIGLANIPGAFLAGYLGARYSKRRLLVGIYLARALIIVAFLAAPPSPWSVYAFSIALGLVWLGT
VPLTSGIVAQIFGVQYLSMLFGVVYLGHQIGAFLGGWIGGLVYDQTGAYLPVWLLAVGLSLAAAAANLLADEAALPRLRP
LAGQA

Sequences:

>Translated_405_residues
MHPSPGRDARILLLRGGAITMLSLGIRHGFGIFLRPMTLDLQWTRETFAFAIALQNLVWGLSQPFAGMLADRHGAGRILA
LGTACYAVGLALMAQSTTATQLALSAGVLIGLGLSGTYTIVIGVVGRAFPPERRSVALGVLGALASFGQFAMLPYGQSLI
SAVGWWWALLVLALNAALMLPLALPLARAKGHPAALAGSGQSIAEALGEAFRHRGFWLVTLGFFVCGFQIVFVATHFPAY
LLDQGMSVDTGMIALALIGLANIPGAFLAGYLGARYSKRRLLVGIYLARALIIVAFLAAPPSPWSVYAFSIALGLVWLGT
VPLTSGIVAQIFGVQYLSMLFGVVYLGHQIGAFLGGWIGGLVYDQTGAYLPVWLLAVGLSLAAAAANLLADEAALPRLRP
LAGQA
>Mature_405_residues
MHPSPGRDARILLLRGGAITMLSLGIRHGFGIFLRPMTLDLQWTRETFAFAIALQNLVWGLSQPFAGMLADRHGAGRILA
LGTACYAVGLALMAQSTTATQLALSAGVLIGLGLSGTYTIVIGVVGRAFPPERRSVALGVLGALASFGQFAMLPYGQSLI
SAVGWWWALLVLALNAALMLPLALPLARAKGHPAALAGSGQSIAEALGEAFRHRGFWLVTLGFFVCGFQIVFVATHFPAY
LLDQGMSVDTGMIALALIGLANIPGAFLAGYLGARYSKRRLLVGIYLARALIIVAFLAAPPSPWSVYAFSIALGLVWLGT
VPLTSGIVAQIFGVQYLSMLFGVVYLGHQIGAFLGGWIGGLVYDQTGAYLPVWLLAVGLSLAAAAANLLADEAALPRLRP
LAGQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1789969, Length=367, Percent_Identity=24.7956403269755, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42481; Mature: 42481

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPSPGRDARILLLRGGAITMLSLGIRHGFGIFLRPMTLDLQWTRETFAFAIALQNLVWG
CCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHH
LSQPFAGMLADRHGAGRILALGTACYAVGLALMAQSTTATQLALSAGVLIGLGLSGTYTI
CCCCHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCHHEEECCCCHHEE
VIGVVGRAFPPERRSVALGVLGALASFGQFAMLPYGQSLISAVGWWWALLVLALNAALML
EEEHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
PLALPLARAKGHPAALAGSGQSIAEALGEAFRHRGFWLVTLGFFVCGFQIVFVATHFPAY
HHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLDQGMSVDTGMIALALIGLANIPGAFLAGYLGARYSKRRLLVGIYLARALIIVAFLAAP
HHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHCC
PSPWSVYAFSIALGLVWLGTVPLTSGIVAQIFGVQYLSMLFGVVYLGHQIGAFLGGWIGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVYDQTGAYLPVWLLAVGLSLAAAAANLLADEAALPRLRPLAGQA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MHPSPGRDARILLLRGGAITMLSLGIRHGFGIFLRPMTLDLQWTRETFAFAIALQNLVWG
CCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHH
LSQPFAGMLADRHGAGRILALGTACYAVGLALMAQSTTATQLALSAGVLIGLGLSGTYTI
CCCCHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCHHEEECCCCHHEE
VIGVVGRAFPPERRSVALGVLGALASFGQFAMLPYGQSLISAVGWWWALLVLALNAALML
EEEHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
PLALPLARAKGHPAALAGSGQSIAEALGEAFRHRGFWLVTLGFFVCGFQIVFVATHFPAY
HHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLDQGMSVDTGMIALALIGLANIPGAFLAGYLGARYSKRRLLVGIYLARALIIVAFLAAP
HHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHCC
PSPWSVYAFSIALGLVWLGTVPLTSGIVAQIFGVQYLSMLFGVVYLGHQIGAFLGGWIGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVYDQTGAYLPVWLLAVGLSLAAAAANLLADEAALPRLRPLAGQA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]