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The map label for this gene is yfgC [C]

Identifier: 119899210

GI number: 119899210

Start: 3207107

End: 3208546

Strand: Reverse

Name: yfgC [C]

Synonym: azo2920

Alternate gene names: 119899210

Gene position: 3208546-3207107 (Counterclockwise)

Preceding gene: 119899213

Following gene: 119899209

Centisome position: 73.32

GC content: 69.44

Gene sequence:

>1440_bases
ATGATGCGCCGACCTCTTGCCCTGCTGCTCAGCCTTGCGCTGGCCTTCCCTGTCCCTGCGGCCGACCTGCCCGACCTGGG
GGACGTCACCGCGTCCGACCTGTCGCCCGCGACGGAGCGCCGCATCGGCGAACAGGTCATCCGCGAGATCCGCCAGGATC
CGGCGTATCTGGACGACCCCGAGGTCGAGGAGTACGTCAATCGGCTGGGACGCAGGCTCGCCGGCGCGAGCCAGAATCCC
CAGCACGACTTCGAGTTCTTCGTGGTCAAGGATTCCACCCTCAACGCCTTCGCGCTGCCGGGCGGGTACATCGGCGTGCA
CACCGGGCTGCTGCTGGCCGCCGAGAGCGAATCCGAACTGGCCTCGGTGCTCGGCCACGAAATCGCCCACGTCACCCAGC
GCCACATTGCCCAACTGGTGGGCAAGCAGAGCCAGAGCAGCATGATGATGCTGGCCTCGCTGCTGGTGGCGGTGCTCGCC
GCGAAGAGCAATTCGCAGGTGAGCGAGGCCGCGATCGCGGCCGGGCAGGCGGGTGCGCTGCAGTCGCAGCTCGGTTATTC
GCGCGATTTCGAACGCGATGCGGACCGCGTCGGGCTGCAGACGCTGGAGGCCGCCGGGTTCGATGTCCGCGGCATGCCGA
GCTTCTTCGAGCGCTTGCAGCGCAACGGCAGGCTCTACGAGAACAACGCCCCGGCTTATCTGCGCACCCATCCGCTGACG
ACCGAGCGCATTGCCGACATGGAAAACCGCGCGACGTCGATGCGTTACCGGCAGGTGCCCGATTCGCCCGATTTCGGTTA
TGTGCGCGCCCGACTGCGCGCCGATGCCGGGCTGCCGACCGATGCGGTACGCGAGCTTGAGAGCCGTGTCGCGCAGTTCC
CCAACGACACCGCGGCGCTGTACGGCCTGGCGCGGGCCCAGTTGCGTGCCGGCCGGCTGGCCGAGGCGGCGACCCATCTC
GAGCGGCTGCGCAAGCTGGCGGAACCCTCGCCCTTCATCGAAACGCTGACGGCCGAGCTTGCGCTGGCGCGCAAGGATGG
CGCGGGTGCCGTCCGGACGCTGGAGAACGCTCAGGCACGCTTCCCCACCAGCAGCAGCCTGCGCTACGCGATCGCCGACG
CGCGCATCCGGGCGGGGCAGGCGCCCGCCGCGGCGGCCGGATTGCGGCAGGCCCTGCTGGGGCGCGGCGATGATCCGCGG
CTGTGGGGCCTGCTGTCGCGTGCAAACGCCGAGATGGGCAAGCGCACCGCGCAGCATCGCGCCCAAGCCGAGGTTTATGC
GCTGCGCGGTACCTTGCCGGCGGCGATCGAACAGTTGGAGATCGCGCGCAAGGCAGCCGATGGCGATTTCTACGAACTGT
CCGCGGTGGATGCCCGTCTGCGCGAACTCAAGGCGCGCTGGCAGGAGGAGCGTCGCGAGCGCCAGGGCGAGCGCAACTAG

Upstream 100 bases:

>100_bases
GGGTGTCGGGATTGGCTCATCGGGGAAGGACCGGAAGGAGGCTACACGCCGATACAGCGAGGCGGGAACGCTGCTGCACG
GGCGGTTATCATAGCACCCG

Downstream 100 bases:

>100_bases
CACCGGCGCGGCTTCCGGGCCCGCGCCCTTTCCTTTACCATCGCTGCGTTTGCCGGCAACGGTTGAAGGATGACGTGATG
GAATACGACAAGGAAGTGGA

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MMRRPLALLLSLALAFPVPAADLPDLGDVTASDLSPATERRIGEQVIREIRQDPAYLDDPEVEEYVNRLGRRLAGASQNP
QHDFEFFVVKDSTLNAFALPGGYIGVHTGLLLAAESESELASVLGHEIAHVTQRHIAQLVGKQSQSSMMMLASLLVAVLA
AKSNSQVSEAAIAAGQAGALQSQLGYSRDFERDADRVGLQTLEAAGFDVRGMPSFFERLQRNGRLYENNAPAYLRTHPLT
TERIADMENRATSMRYRQVPDSPDFGYVRARLRADAGLPTDAVRELESRVAQFPNDTAALYGLARAQLRAGRLAEAATHL
ERLRKLAEPSPFIETLTAELALARKDGAGAVRTLENAQARFPTSSSLRYAIADARIRAGQAPAAAAGLRQALLGRGDDPR
LWGLLSRANAEMGKRTAQHRAQAEVYALRGTLPAAIEQLEIARKAADGDFYELSAVDARLRELKARWQEERRERQGERN

Sequences:

>Translated_479_residues
MMRRPLALLLSLALAFPVPAADLPDLGDVTASDLSPATERRIGEQVIREIRQDPAYLDDPEVEEYVNRLGRRLAGASQNP
QHDFEFFVVKDSTLNAFALPGGYIGVHTGLLLAAESESELASVLGHEIAHVTQRHIAQLVGKQSQSSMMMLASLLVAVLA
AKSNSQVSEAAIAAGQAGALQSQLGYSRDFERDADRVGLQTLEAAGFDVRGMPSFFERLQRNGRLYENNAPAYLRTHPLT
TERIADMENRATSMRYRQVPDSPDFGYVRARLRADAGLPTDAVRELESRVAQFPNDTAALYGLARAQLRAGRLAEAATHL
ERLRKLAEPSPFIETLTAELALARKDGAGAVRTLENAQARFPTSSSLRYAIADARIRAGQAPAAAAGLRQALLGRGDDPR
LWGLLSRANAEMGKRTAQHRAQAEVYALRGTLPAAIEQLEIARKAADGDFYELSAVDARLRELKARWQEERRERQGERN
>Mature_479_residues
MMRRPLALLLSLALAFPVPAADLPDLGDVTASDLSPATERRIGEQVIREIRQDPAYLDDPEVEEYVNRLGRRLAGASQNP
QHDFEFFVVKDSTLNAFALPGGYIGVHTGLLLAAESESELASVLGHEIAHVTQRHIAQLVGKQSQSSMMMLASLLVAVLA
AKSNSQVSEAAIAAGQAGALQSQLGYSRDFERDADRVGLQTLEAAGFDVRGMPSFFERLQRNGRLYENNAPAYLRTHPLT
TERIADMENRATSMRYRQVPDSPDFGYVRARLRADAGLPTDAVRELESRVAQFPNDTAALYGLARAQLRAGRLAEAATHL
ERLRKLAEPSPFIETLTAELALARKDGAGAVRTLENAQARFPTSSSLRYAIADARIRAGQAPAAAAGLRQALLGRGDDPR
LWGLLSRANAEMGKRTAQHRAQAEVYALRGTLPAAIEQLEIARKAADGDFYELSAVDARLRELKARWQEERRERQGERN

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=216, Percent_Identity=25.9259259259259, Blast_Score=74, Evalue=4e-13,
Organism=Escherichia coli, GI1788840, Length=428, Percent_Identity=34.5794392523364, Blast_Score=220, Evalue=2e-58,
Organism=Escherichia coli, GI87082185, Length=270, Percent_Identity=26.2962962962963, Blast_Score=62, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6322940, Length=173, Percent_Identity=29.4797687861272, Blast_Score=63, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 52481; Mature: 52481

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRRPLALLLSLALAFPVPAADLPDLGDVTASDLSPATERRIGEQVIREIRQDPAYLDDP
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
EVEEYVNRLGRRLAGASQNPQHDFEFFVVKDSTLNAFALPGGYIGVHTGLLLAAESESEL
HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEECCCCHHHHHHCEEEEECCHHHH
ASVLGHEIAHVTQRHIAQLVGKQSQSSMMMLASLLVAVLAAKSNSQVSEAAIAAGQAGAL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHH
QSQLGYSRDFERDADRVGLQTLEAAGFDVRGMPSFFERLQRNGRLYENNAPAYLRTHPLT
HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEECCCCCEEEECCCC
TERIADMENRATSMRYRQVPDSPDFGYVRARLRADAGLPTDAVRELESRVAQFPNDTAAL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHH
YGLARAQLRAGRLAEAATHLERLRKLAEPSPFIETLTAELALARKDGAGAVRTLENAQAR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
FPTSSSLRYAIADARIRAGQAPAAAAGLRQALLGRGDDPRLWGLLSRANAEMGKRTAQHR
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
AQAEVYALRGTLPAAIEQLEIARKAADGDFYELSAVDARLRELKARWQEERRERQGERN
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMRRPLALLLSLALAFPVPAADLPDLGDVTASDLSPATERRIGEQVIREIRQDPAYLDDP
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
EVEEYVNRLGRRLAGASQNPQHDFEFFVVKDSTLNAFALPGGYIGVHTGLLLAAESESEL
HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEECCCCHHHHHHCEEEEECCHHHH
ASVLGHEIAHVTQRHIAQLVGKQSQSSMMMLASLLVAVLAAKSNSQVSEAAIAAGQAGAL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHH
QSQLGYSRDFERDADRVGLQTLEAAGFDVRGMPSFFERLQRNGRLYENNAPAYLRTHPLT
HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEECCCCCEEEECCCC
TERIADMENRATSMRYRQVPDSPDFGYVRARLRADAGLPTDAVRELESRVAQFPNDTAAL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHH
YGLARAQLRAGRLAEAATHLERLRKLAEPSPFIETLTAELALARKDGAGAVRTLENAQAR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
FPTSSSLRYAIADARIRAGQAPAAAAGLRQALLGRGDDPRLWGLLSRANAEMGKRTAQHR
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
AQAEVYALRGTLPAAIEQLEIARKAADGDFYELSAVDARLRELKARWQEERRERQGERN
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]