| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is pilE [C]
Identifier: 119899208
GI number: 119899208
Start: 3206332
End: 3206736
Strand: Direct
Name: pilE [C]
Synonym: azo2918
Alternate gene names: 119899208
Gene position: 3206332-3206736 (Clockwise)
Preceding gene: 119899207
Following gene: 119899211
Centisome position: 73.27
GC content: 63.46
Gene sequence:
>405_bases ATGAAAAGCACCCAACGCGCGTTCAGCCTCGTCGAGCTGATGATCGTCGTCGCGGTTATCGGCATCCTCGCCGCAATCGC GTATCCCAACTATCAGGACTATCTGATCAAGGCGCGCCGGGCTACCGCCACCGGATGCCTGATGGAACTCGCGCAGTTCC TCGAGCGCCACTACACCACCCACATGAGCTACACCGACGCGGTATTGCCCGAAACGGCCTGCCGAACGGAACTGGGCGGT TTTTATACCTTCGGCTATTCGCAGGACCTCACGGCCACAACCTATGCGCTGGAGGCAGTACCGCAAGGGGCACAGACGGC CGACAGCCGCTGCGGCACGCTCGGGATCAACCAGTCCGGCGCCCGCTCGGCGAGCGGATCGGCGGGGGTCACCGCGTGCT GGTAA
Upstream 100 bases:
>100_bases TCGTCGGCGGCTCCAGCGGCAGGATCGCGGACATGCGCGTCAATACCGGCGTCAAGCGCACCGGCCGGCTCTCCTGGCGC GAGATCATCAAGGATTAAGC
Downstream 100 bases:
>100_bases GCCCGCGCTGTTCATAAAGCAAAACGGGGCCGATGGCCCCGTTTTGCTTGCAGCGTCCGGACTTACTTGCGCTTGAGGAA GAACTCGAACGTCTTGTCCG
Product: putative prepilin like protein
Products: NA
Alternate protein names: Type 4 Fimbrial Biogenesis Protein PilE; Type IV Pilin; PilE Protein; Fimbrial Protein Pilin; Type IV Pilin Pile Protein
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKSTQRAFSLVELMIVVAVIGILAAIAYPNYQDYLIKARRATATGCLMELAQFLERHYTTHMSYTDAVLPETACRTELGG FYTFGYSQDLTATTYALEAVPQGAQTADSRCGTLGINQSGARSASGSAGVTACW
Sequences:
>Translated_134_residues MKSTQRAFSLVELMIVVAVIGILAAIAYPNYQDYLIKARRATATGCLMELAQFLERHYTTHMSYTDAVLPETACRTELGG FYTFGYSQDLTATTYALEAVPQGAQTADSRCGTLGINQSGARSASGSAGVTACW >Mature_134_residues MKSTQRAFSLVELMIVVAVIGILAAIAYPNYQDYLIKARRATATGCLMELAQFLERHYTTHMSYTDAVLPETACRTELGG FYTFGYSQDLTATTYALEAVPQGAQTADSRCGTLGINQSGARSASGSAGVTACW
Specific function: Not Yet Known. [C]
COG id: COG4968
COG function: function code NU; Tfp pilus assembly protein PilE
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14391; Mature: 14391
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSTQRAFSLVELMIVVAVIGILAAIAYPNYQDYLIKARRATATGCLMELAQFLERHYTT CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HMSYTDAVLPETACRTELGGFYTFGYSQDLTATTYALEAVPQGAQTADSRCGTLGINQSG CCCHHHHHCCHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCHHCCCCCCCCCCCC ARSASGSAGVTACW CCCCCCCCCCEECC >Mature Secondary Structure MKSTQRAFSLVELMIVVAVIGILAAIAYPNYQDYLIKARRATATGCLMELAQFLERHYTT CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HMSYTDAVLPETACRTELGGFYTFGYSQDLTATTYALEAVPQGAQTADSRCGTLGINQSG CCCHHHHHCCHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCHHCCCCCCCCCCCC ARSASGSAGVTACW CCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA