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The map label for this gene is lptF [H]

Identifier: 119899193

GI number: 119899193

Start: 3185201

End: 3186280

Strand: Reverse

Name: lptF [H]

Synonym: azo2903

Alternate gene names: 119899193

Gene position: 3186280-3185201 (Counterclockwise)

Preceding gene: 119899198

Following gene: 119899192

Centisome position: 72.81

GC content: 68.61

Gene sequence:

>1080_bases
ATGATCTTCCGCCGCGCCTTGCTGCGCGAATTCAGCCAGACCGCTGCGGCGGTGTTCGTCGCCCTGTTCGCGATCCTGGT
CACCATTGTCCTGATCCGGCTGCTCGGCCAGGCGGCCGGCGGCGGCGTTCCGTCCGACGCGGTGCTGGCACTGATCGGAT
TCGGCGCGCTGACCGAGATGCCGGTGGTGCTCACCCTGACCCTGTTCGTCGCGGTGCTGTTGACGCTGTCGCGCAGCTAC
CGCGATTCCGAAATGGTGGTGTGGTTCGCCTCCGGCGTGCCGCTGACGGCGTGGATCGGGCCGGTGCTGCGCTTCGCGCT
GCCGGTCGTGGCGGTCATCGCCGGCATGACCCTGTTCCTGTCACCGTGGGCGCACATGAAGAATGCGGAATACCGCGAAC
GCCTCGAAAGCCGTGATGACACCCAGCGCGTGGCGCCGGGCGTGTTCCGCGAATCCGCGGGCTCGCGCCGGGTGTTCTTC
GTCGAGGTGGGCGCGGGCGAGGACGGGCGGGTGCGCAACGTCTTCGTCAGCGACGAGAACGGCGACCGGCTCAGCGTCAT
CGCCGCCGCGGAGGGCTATCTGAAGACCGACGAAGAGGGCAACCGCTTCGTCGTGCTCGAGAAGGGGCGGCGCTACGACG
GCAAGCCGGGTACGCCCGAGTACCGGGTGATGAGCTTCGAACGCTACTCGGTGCAGATCGAGGCCAAGCAGGCGGCCGCC
CAGCCGCAGCGCAGCCGCGCGCGGCCTACCGAAGAGCTGTTGCGCAGCCCCGACGACCGCAACCTGGGCGAGCTGGCGGG
CCGTGTGGGCACGCCGCTGGCGGCGCTGCTGCTGGCCCTGCTGGCGATCCCGCTGTCCTTCGTCAATCCGCGTGCGGGCC
GTACCAACAACCTGCTGGTGGCCATCCTCACCTACCTGATCTACAGCAACGCGATCACGATCGGTCAGGCTTGGGTGGCA
CAGGGCCGGCTGCGCTTCGAACTGGCGGTGCTGCTGCCGCATCTGGTGGTGCTGGGCCTGCTCGCGTTGATGTTCTACAA
GCGTCTGGCGGTGTCGCCGATCTGGCGGGTGCGCGCATGA

Upstream 100 bases:

>100_bases
CGATTATGGACCGTAGCCGTCAACGCCGTCAAAAACGCCCCCGGCAGCGGCCGGGCCAACGGCTTCCTTCCCCCTTGCAT
AACGGTTTTCCCCTCGCGCG

Downstream 100 bases:

>100_bases
GCAAGATCCTGTCGCGTTACCTCGCCAAGGAAATCTTCGGCGCCACGGCAACGGTGCTGGTCGCCTTCCTCGGGCTGTTC
GCGTTCTTCGACTTCATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MIFRRALLREFSQTAAAVFVALFAILVTIVLIRLLGQAAGGGVPSDAVLALIGFGALTEMPVVLTLTLFVAVLLTLSRSY
RDSEMVVWFASGVPLTAWIGPVLRFALPVVAVIAGMTLFLSPWAHMKNAEYRERLESRDDTQRVAPGVFRESAGSRRVFF
VEVGAGEDGRVRNVFVSDENGDRLSVIAAAEGYLKTDEEGNRFVVLEKGRRYDGKPGTPEYRVMSFERYSVQIEAKQAAA
QPQRSRARPTEELLRSPDDRNLGELAGRVGTPLAALLLALLAIPLSFVNPRAGRTNNLLVAILTYLIYSNAITIGQAWVA
QGRLRFELAVLLPHLVVLGLLALMFYKRLAVSPIWRVRA

Sequences:

>Translated_359_residues
MIFRRALLREFSQTAAAVFVALFAILVTIVLIRLLGQAAGGGVPSDAVLALIGFGALTEMPVVLTLTLFVAVLLTLSRSY
RDSEMVVWFASGVPLTAWIGPVLRFALPVVAVIAGMTLFLSPWAHMKNAEYRERLESRDDTQRVAPGVFRESAGSRRVFF
VEVGAGEDGRVRNVFVSDENGDRLSVIAAAEGYLKTDEEGNRFVVLEKGRRYDGKPGTPEYRVMSFERYSVQIEAKQAAA
QPQRSRARPTEELLRSPDDRNLGELAGRVGTPLAALLLALLAIPLSFVNPRAGRTNNLLVAILTYLIYSNAITIGQAWVA
QGRLRFELAVLLPHLVVLGLLALMFYKRLAVSPIWRVRA
>Mature_359_residues
MIFRRALLREFSQTAAAVFVALFAILVTIVLIRLLGQAAGGGVPSDAVLALIGFGALTEMPVVLTLTLFVAVLLTLSRSY
RDSEMVVWFASGVPLTAWIGPVLRFALPVVAVIAGMTLFLSPWAHMKNAEYRERLESRDDTQRVAPGVFRESAGSRRVFF
VEVGAGEDGRVRNVFVSDENGDRLSVIAAAEGYLKTDEEGNRFVVLEKGRRYDGKPGTPEYRVMSFERYSVQIEAKQAAA
QPQRSRARPTEELLRSPDDRNLGELAGRVGTPLAALLLALLAIPLSFVNPRAGRTNNLLVAILTYLIYSNAITIGQAWVA
QGRLRFELAVLLPHLVVLGLLALMFYKRLAVSPIWRVRA

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=363, Percent_Identity=28.099173553719, Blast_Score=114, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 39466; Mature: 39466

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFRRALLREFSQTAAAVFVALFAILVTIVLIRLLGQAAGGGVPSDAVLALIGFGALTEM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
PVVLTLTLFVAVLLTLSRSYRDSEMVVWFASGVPLTAWIGPVLRFALPVVAVIAGMTLFL
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SPWAHMKNAEYRERLESRDDTQRVAPGVFRESAGSRRVFFVEVGAGEDGRVRNVFVSDEN
CCHHHHCCCHHHHHHHCCCCHHHHCCHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCC
GDRLSVIAAAEGYLKTDEEGNRFVVLEKGRRYDGKPGTPEYRVMSFERYSVQIEAKQAAA
CCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEHHHHHC
QPQRSRARPTEELLRSPDDRNLGELAGRVGTPLAALLLALLAIPLSFVNPRAGRTNNLLV
CCHHHCCCCHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH
AILTYLIYSNAITIGQAWVAQGRLRFELAVLLPHLVVLGLLALMFYKRLAVSPIWRVRA
HHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MIFRRALLREFSQTAAAVFVALFAILVTIVLIRLLGQAAGGGVPSDAVLALIGFGALTEM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
PVVLTLTLFVAVLLTLSRSYRDSEMVVWFASGVPLTAWIGPVLRFALPVVAVIAGMTLFL
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SPWAHMKNAEYRERLESRDDTQRVAPGVFRESAGSRRVFFVEVGAGEDGRVRNVFVSDEN
CCHHHHCCCHHHHHHHCCCCHHHHCCHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCC
GDRLSVIAAAEGYLKTDEEGNRFVVLEKGRRYDGKPGTPEYRVMSFERYSVQIEAKQAAA
CCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEHHHHHC
QPQRSRARPTEELLRSPDDRNLGELAGRVGTPLAALLLALLAIPLSFVNPRAGRTNNLLV
CCHHHCCCCHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH
AILTYLIYSNAITIGQAWVAQGRLRFELAVLLPHLVVLGLLALMFYKRLAVSPIWRVRA
HHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]