Definition Azoarcus sp. BH72 chromosome, complete genome.
Accession NC_008702
Length 4,376,040

Click here to switch to the map view.

The map label for this gene is ydhR [H]

Identifier: 119899155

GI number: 119899155

Start: 3145796

End: 3146101

Strand: Direct

Name: ydhR [H]

Synonym: azo2865

Alternate gene names: 119899155

Gene position: 3145796-3146101 (Clockwise)

Preceding gene: 119899154

Following gene: 119899156

Centisome position: 71.89

GC content: 67.65

Gene sequence:

>306_bases
ATGACGACCCGCCTGCTGCAGATCGACTTTCCCTACGACGGCCCCTGGGGCGAGGCGCTGGCGAGCGCCTGCGACCCGCT
TGCGCACGACATCGCCGGCGAATCCGGCCTGCGCTGGAAGATCTGGACCGAGAACCGCGAGCGCGGACGCGCAGGCGGCA
TCTATCTGTTCGACGACGAAGCCGCCTGCACGCGCTATCTCGAAAAGCACCGCGCCCGTCTGGCCGGTTTCGGCATTGTC
GACATCCGCGCGGAAGTGTTCGAGGTCAACGGCCCGCTGTCGGCGATCACGCGCGCACCGCTGTAA

Upstream 100 bases:

>100_bases
AGGCAGAACGAGGGGCAATCAACCCGGCAAAGTCGGAACCCGGCCAAGCATCTATCATTCTTCTGCGGAGATTCCCTGCC
GCCACGACAAGGAGATTGAG

Downstream 100 bases:

>100_bases
GCGGCTCACCCCGGGCGCGGCGATGCCACTACAATCGCCGCTTCCGCGTTTCAGCCGGGGCCGCCGGACCGCCATGCCCA
GCCAGGACGAGTATTTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MTTRLLQIDFPYDGPWGEALASACDPLAHDIAGESGLRWKIWTENRERGRAGGIYLFDDEAACTRYLEKHRARLAGFGIV
DIRAEVFEVNGPLSAITRAPL

Sequences:

>Translated_101_residues
MTTRLLQIDFPYDGPWGEALASACDPLAHDIAGESGLRWKIWTENRERGRAGGIYLFDDEAACTRYLEKHRARLAGFGIV
DIRAEVFEVNGPLSAITRAPL
>Mature_100_residues
TTRLLQIDFPYDGPWGEALASACDPLAHDIAGESGLRWKIWTENRERGRAGGIYLFDDEAACTRYLEKHRARLAGFGIVD
IRAEVFEVNGPLSAITRAPL

Specific function: May function as monoxygenase and play a role in the metabolism of aromatic compounds (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787956, Length=97, Percent_Identity=50.5154639175258, Blast_Score=109, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR014910 [H]

Pfam domain/function: PF08803 ydhR [H]

EC number: NA

Molecular weight: Translated: 11248; Mature: 11117

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRLLQIDFPYDGPWGEALASACDPLAHDIAGESGLRWKIWTENRERGRAGGIYLFDDE
CCCEEEEEECCCCCCHHHHHHHHHCHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEECCC
AACTRYLEKHRARLAGFGIVDIRAEVFEVNGPLSAITRAPL
HHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHCCCCC
>Mature Secondary Structure 
TTRLLQIDFPYDGPWGEALASACDPLAHDIAGESGLRWKIWTENRERGRAGGIYLFDDE
CCEEEEEECCCCCCHHHHHHHHHCHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEECCC
AACTRYLEKHRARLAGFGIVDIRAEVFEVNGPLSAITRAPL
HHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9023191; 9278503; 10493123 [H]