Definition Azoarcus sp. BH72 chromosome, complete genome.
Accession NC_008702
Length 4,376,040

Click here to switch to the map view.

The map label for this gene is qbdB2

Identifier: 119899135

GI number: 119899135

Start: 3125178

End: 3126107

Strand: Reverse

Name: qbdB2

Synonym: azo2845

Alternate gene names: NA

Gene position: 3126107-3125178 (Counterclockwise)

Preceding gene: 119899139

Following gene: 119899134

Centisome position: 71.44

GC content: 67.31

Gene sequence:

>930_bases
ATGAAGCAAGCAGGGAAGGCGGCCGCGCGCCGCCAACAGAAGATTCCCGCGATCCCCGCATCCCGTTTCCTCGCCGCGGC
GGTGCTGGCGGCCAGCGCGTTCGGCAGCGGCAATGCCGTTGCGGTGGATGTGGATGCCGGCGACTACACGGCGCTGCCGG
CCGGCACCAACCTCGCGCTGGTGTATTACCAGCACGCTACCCGCGACGCCCTCTATGCACGCGGCCACAAGGCCCCGATC
GACGCCGGCCTGGTGTCGGACGTGGGCATCCTGCGCGGCGTGCATTACACCGAGATCGGTGGCTACATCGTCGATCCGCA
GTTCCTGCTGCCCTTCGGCCGCTTGCAGGGCAAGGACGACCTCTCCGGCCTGGGCAGTGCGCGCGGCGTGGGTGATCTGA
TCCTGGCGGCCACGGTGTGGCTGGTGAATCGCCCGGAAACCGGCACCTACTTCGGCATCACCCCGTTCCTGTTCGCGCCT
ACCGGCAGCTATGACCGCGACGACGCGCTGAACCTCGGCGAAAACCGGTGGAAGTTCGCGCTGCAGGCGGGCTTCATCAC
CAAGCTCGCGCCCAAGGTGTCGCTGGACCTGATCGGCGACGTGACCGTGTATGGCAAGAACGACGCCTACGGCGCGACCA
GCGCCACGCTGAAGCAGGACCCGAGCGTCCAGCTGCAGGGTTTCCTGCGCTACCACCTGAGCGATGCGTGGGACCTGCGG
GCCGGCGTGTCCCACACCTTCGGCGGTGAAACCCGCGTCAACGGCGTCGACCAGAACGACCGAATGGAAACCACCAAGGC
GATGCTCGGCACCGCCTGGTTCGTGACGCCCTCGGTGCAGCTGATGGCCAACTACGGCCGCGACCTGTCGGTGCGCAGCG
GCCTGCGCGAGGACAACCGCATCAACCTGCGTCTGCTCAAGGTGTTCTGA

Upstream 100 bases:

>100_bases
CGGTGCCTGCACTGGCGTGGCGGCCTGCGCTGTCGCAGGCGGCGAGCCGACCACCATGACCAGAAGGCCGCCGAATCATA
CAACGACCGGAGACACGTAC

Downstream 100 bases:

>100_bases
TGGGCGCCCGCGAGAACAGCCGGTTCGGCGCCGCTGCAAGCCCGTGTGGCCCGGAAGGAGAAGAGATGAGTGCGGTAGGT
ATGGCGCGACGCAGTGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Phenol Degradation; Quinohemoprotein Alcohol Dehydrogenase; Alcohol Dehydrogenase; QbdB Protein; Meta-Pathway Phenol Degradation-Like Protein; Signal Peptide-Containing Protein

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKQAGKAAARRQQKIPAIPASRFLAAAVLAASAFGSGNAVAVDVDAGDYTALPAGTNLALVYYQHATRDALYARGHKAPI
DAGLVSDVGILRGVHYTEIGGYIVDPQFLLPFGRLQGKDDLSGLGSARGVGDLILAATVWLVNRPETGTYFGITPFLFAP
TGSYDRDDALNLGENRWKFALQAGFITKLAPKVSLDLIGDVTVYGKNDAYGATSATLKQDPSVQLQGFLRYHLSDAWDLR
AGVSHTFGGETRVNGVDQNDRMETTKAMLGTAWFVTPSVQLMANYGRDLSVRSGLREDNRINLRLLKVF

Sequences:

>Translated_309_residues
MKQAGKAAARRQQKIPAIPASRFLAAAVLAASAFGSGNAVAVDVDAGDYTALPAGTNLALVYYQHATRDALYARGHKAPI
DAGLVSDVGILRGVHYTEIGGYIVDPQFLLPFGRLQGKDDLSGLGSARGVGDLILAATVWLVNRPETGTYFGITPFLFAP
TGSYDRDDALNLGENRWKFALQAGFITKLAPKVSLDLIGDVTVYGKNDAYGATSATLKQDPSVQLQGFLRYHLSDAWDLR
AGVSHTFGGETRVNGVDQNDRMETTKAMLGTAWFVTPSVQLMANYGRDLSVRSGLREDNRINLRLLKVF
>Mature_309_residues
MKQAGKAAARRQQKIPAIPASRFLAAAVLAASAFGSGNAVAVDVDAGDYTALPAGTNLALVYYQHATRDALYARGHKAPI
DAGLVSDVGILRGVHYTEIGGYIVDPQFLLPFGRLQGKDDLSGLGSARGVGDLILAATVWLVNRPETGTYFGITPFLFAP
TGSYDRDDALNLGENRWKFALQAGFITKLAPKVSLDLIGDVTVYGKNDAYGATSATLKQDPSVQLQGFLRYHLSDAWDLR
AGVSHTFGGETRVNGVDQNDRMETTKAMLGTAWFVTPSVQLMANYGRDLSVRSGLREDNRINLRLLKVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33254; Mature: 33254

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQAGKAAARRQQKIPAIPASRFLAAAVLAASAFGSGNAVAVDVDAGDYTALPAGTNLAL
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCEEE
VYYQHATRDALYARGHKAPIDAGLVSDVGILRGVHYTEIGGYIVDPQFLLPFGRLQGKDD
EEEECCCHHHHHHCCCCCCCCCCHHHHHHHHCCCEEECCCCEEECCHHCCCHHHCCCCCC
LSGLGSARGVGDLILAATVWLVNRPETGTYFGITPFLFAPTGSYDRDDALNLGENRWKFA
HHCCCCCCCHHHHHHHHHHHEEECCCCCCEECCCCEEEECCCCCCCCCCCCCCCCCEEEE
LQAGFITKLAPKVSLDLIGDVTVYGKNDAYGATSATLKQDPSVQLQGFLRYHLSDAWDLR
EECCHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH
AGVSHTFGGETRVNGVDQNDRMETTKAMLGTAWFVTPSVQLMANYGRDLSVRSGLREDNR
CCCCCCCCCCEEECCCCCCCHHHHHHHHHHEEEEECCCHHHHHHCCCCCHHHCCCCCCCC
INLRLLKVF
EEEEEEEEC
>Mature Secondary Structure
MKQAGKAAARRQQKIPAIPASRFLAAAVLAASAFGSGNAVAVDVDAGDYTALPAGTNLAL
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCEEE
VYYQHATRDALYARGHKAPIDAGLVSDVGILRGVHYTEIGGYIVDPQFLLPFGRLQGKDD
EEEECCCHHHHHHCCCCCCCCCCHHHHHHHHCCCEEECCCCEEECCHHCCCHHHCCCCCC
LSGLGSARGVGDLILAATVWLVNRPETGTYFGITPFLFAPTGSYDRDDALNLGENRWKFA
HHCCCCCCCHHHHHHHHHHHEEECCCCCCEECCCCEEEECCCCCCCCCCCCCCCCCEEEE
LQAGFITKLAPKVSLDLIGDVTVYGKNDAYGATSATLKQDPSVQLQGFLRYHLSDAWDLR
EECCHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH
AGVSHTFGGETRVNGVDQNDRMETTKAMLGTAWFVTPSVQLMANYGRDLSVRSGLREDNR
CCCCCCCCCCEEECCCCCCCHHHHHHHHHHEEEEECCCHHHHHHCCCCCHHHCCCCCCCC
INLRLLKVF
EEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA