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The map label for this gene is secB

Identifier: 119899102

GI number: 119899102

Start: 3093432

End: 3093887

Strand: Direct

Name: secB

Synonym: azo2812

Alternate gene names: 119899102

Gene position: 3093432-3093887 (Clockwise)

Preceding gene: 119899101

Following gene: 119899103

Centisome position: 70.69

GC content: 62.5

Gene sequence:

>456_bases
ATGACCGAAAACGCCCAGCCGATGTTCTCCATCGAAAAGATCTACATCAAGGATCTTTCGCTCGAAGTCCCCAACGCACC
GAAGATCTTCCTGGAGCGCGACACGCCGCAGATCAGCGTGCAACTGCGCACCGAGGGCAACACGGTGGACGAAGGCCTGT
ACGAAGTGACGCTGACCGTCACCGTGTCGGCCACGCTTGGCGAAGACCGCTCGGTGTTCCTGGTCGAGGTTGCCCAGGCG
GGCGTGTTCCAGATCCGCAACGTGCCGCCCGCCGAACTCGAGCCGGTGATGATGATCGGCTGCCCCAACATCCTGTTCCC
GTACGCCCGCGAAGCCGTTTCCGCGGCGGTCAGCCGTGCCGGCTTCCAGCCGATCGTGCTCGCGCCGGTAAACTTCGAAG
CGCTCTACCAGCAACAACAAGCTGCCAAGGAAGGCGGCGACGTCGCCATCCAGTAA

Upstream 100 bases:

>100_bases
TGACCCGCTGCTTGCCAAGCTGGCGGGCTGAATCCCGCCGCCCCACCCCGCAACCTCCACCCGCATTTCCTTAACCCAGC
CGTATCCCACAGGCCATCCC

Downstream 100 bases:

>100_bases
GCCCATGCTCACGTCCAGTCTTCGCCTTGCCCTCTCGATCGCGCTCGCCGGCGCGTGCGGGGCCGCCCACGCGATCGAGT
ATCGCTCGGTCGCCGAGCCC

Product: preprotein translocase subunit SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MTENAQPMFSIEKIYIKDLSLEVPNAPKIFLERDTPQISVQLRTEGNTVDEGLYEVTLTVTVSATLGEDRSVFLVEVAQA
GVFQIRNVPPAELEPVMMIGCPNILFPYAREAVSAAVSRAGFQPIVLAPVNFEALYQQQQAAKEGGDVAIQ

Sequences:

>Translated_151_residues
MTENAQPMFSIEKIYIKDLSLEVPNAPKIFLERDTPQISVQLRTEGNTVDEGLYEVTLTVTVSATLGEDRSVFLVEVAQA
GVFQIRNVPPAELEPVMMIGCPNILFPYAREAVSAAVSRAGFQPIVLAPVNFEALYQQQQAAKEGGDVAIQ
>Mature_150_residues
TENAQPMFSIEKIYIKDLSLEVPNAPKIFLERDTPQISVQLRTEGNTVDEGLYEVTLTVTVSATLGEDRSVFLVEVAQAG
VFQIRNVPPAELEPVMMIGCPNILFPYAREAVSAAVSRAGFQPIVLAPVNFEALYQQQQAAKEGGDVAIQ

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family

Homologues:

Organism=Escherichia coli, GI1790038, Length=144, Percent_Identity=44.4444444444444, Blast_Score=128, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECB_AZOSB (A1K9C3)

Other databases:

- EMBL:   AM406670
- RefSeq:   YP_934315.1
- ProteinModelPortal:   A1K9C3
- SMR:   A1K9C3
- STRING:   A1K9C3
- GeneID:   4608943
- GenomeReviews:   AM406670_GR
- KEGG:   azo:azo2812
- eggNOG:   COG1952
- HOGENOM:   HBG294212
- OMA:   GFPPLMI
- PhylomeDB:   A1K9C3
- ProtClustDB:   PRK05751
- BioCyc:   ASP62928:AZO2812-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00821
- InterPro:   IPR003708
- Gene3D:   G3DSA:3.10.420.10
- PRINTS:   PR01594
- TIGRFAMs:   TIGR00809

Pfam domain/function: PF02556 SecB; SSF54611 SecB

EC number: NA

Molecular weight: Translated: 16511; Mature: 16380

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTENAQPMFSIEKIYIKDLSLEVPNAPKIFLERDTPQISVQLRTEGNTVDEGLYEVTLTV
CCCCCCCCEEEEEEEEEEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCEEEEEEEE
TVSATLGEDRSVFLVEVAQAGVFQIRNVPPAELEPVMMIGCPNILFPYAREAVSAAVSRA
EEEEECCCCCCEEEEEECCCCEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHC
GFQPIVLAPVNFEALYQQQQAAKEGGDVAIQ
CCCEEEEECCCHHHHHHHHHHHHCCCCEEEC
>Mature Secondary Structure 
TENAQPMFSIEKIYIKDLSLEVPNAPKIFLERDTPQISVQLRTEGNTVDEGLYEVTLTV
CCCCCCCEEEEEEEEEEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCEEEEEEEE
TVSATLGEDRSVFLVEVAQAGVFQIRNVPPAELEPVMMIGCPNILFPYAREAVSAAVSRA
EEEEECCCCCCEEEEEECCCCEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHC
GFQPIVLAPVNFEALYQQQQAAKEGGDVAIQ
CCCEEEEECCCHHHHHHHHHHHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA