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The map label for this gene is ctpa [H]

Identifier: 119899096

GI number: 119899096

Start: 3088619

End: 3089998

Strand: Reverse

Name: ctpa [H]

Synonym: azo2806

Alternate gene names: 119899096

Gene position: 3089998-3088619 (Counterclockwise)

Preceding gene: 119899097

Following gene: 119899095

Centisome position: 70.61

GC content: 65.22

Gene sequence:

>1380_bases
ATGGGCAGCAAGCTGAAACAGTTCGGCCTCGTCATGACTGGCGTCGTGGCCGGCGTGATGATCAGTCTCAATTTCTCGGC
CAATGCCGACAAGGCCGCGCTCGCGCCGCTGCCCGTGGAGGAATTGCGCGCCTTCGCAGACGTCTTCAACGCCATCAAGC
AGGGCTATGTCGAGCCGGTCGAGGACAAGAAACTCGTCACTCACGCGATCAGCGGCATGCTCAGCGGGCTCGATCCGCAT
TCCGCCTATCTAGATGCCGAAGCCTTCAAGGACCTGCAGGTCGGCACCCAGGGCGAGTTTGGCGGCCTCGGCATCGAGGT
CGGCATGGAGGACGGCTTCGTCAAGGTGGTGTCACCGATCGAGGACACGCCGGCTTACCGCGCCGGAGTCAAGGCGGGCG
ACCTGATCGTCAAGCTCGACGACACGCCGGTAAAGGGCATGAACCTCAACGACGCCGTCAAGCGCATGCGCGGCAAGCCC
AAGACCGACATCACCCTCACCATCATGCGCAAGGGCGAGTCGCGTCCCATCGTGCTGACGCTGACGCGCGAAGTCATCAA
GGTGCAGAGCGTCAAGTCCAAGGTCATCGAACCCGGCTACGGTTATGTGCGGGTCGCCCAGTTCCAGGAAAACACCGGGG
CCTCGCTGGTGCAGCACCTCGACAAGCTGAGCAAGGAAGGGCAGCTCAAGGGGCTGGTGCTCGACCTGCGCAACGATCCG
GGCGGGTTGCTGAATGGCGCGGTCGGTGTGGCGGCGGCCTTCCTGCCGCCGGAGGCCCAGGTGGTCTCTACCGACGGCCG
TACCGAGGACGCCAAGCGCCAGTACCGCGCTACCCCGGAGGACTATCTCCGCGGCTCGCGTGACGACTACCTGAAGGCGC
TGCCGCGCGGCATCAAGGACGTGCCGATGGTGGTGCTGGTCAACGGCGGTTCGGCGTCCGCGTCGGAGATCGTTGCCGGC
GCGCTGCAGGATCACAAGCGCGCCGTCGTGATGGGCACCCAGACCTTCGGCAAGGGGTCGGTGCAGACCATCCTGCCGCT
CAACGGCAACACCGCGATCAAGCTGACCACCGCACGCTACTACACGCCGAGTGGCCGCTCCATCCAGGCCAAGGGTATCG
AGCCCGACATCGTGGTCGAGGAAGGCGCCAATGGTTCTGCGCGCCGCGTGCGCGAGGCGGACCTCCAGGGCCACCTCGGC
AACGACCGCGACCCGGAGGCCGAGCGCAAGCTGCAGGCGACCAAGAACGGCGAGCACAAGCCGGGCGAGGACGACGACGA
GGCGCAGCCGCGCTTCGAGATCGCGGGCAAGGACGACAACCAGCTCGCGCAGGCGATCAATCTGCTCAAGGGACTGCAGA
TCGTCCAGAATAAGAAATAA

Upstream 100 bases:

>100_bases
CGGCCGGTCGATCCCCTGCAGTGGGTGCGCTTGAACTAGCAAGTGCGGCAGACCGGCCCCGCCGGGACGCCGCGAACGTA
TTTTCTCCGTTGGAGTTTTC

Downstream 100 bases:

>100_bases
GACATTCGGGGGAGGTCGTCATGCGTCCTGAAACGGCATACCGCCTGGCGGGCAGGCATCACGATCATCCCCCGGTGGCC
GGGGCGAATGCAGGCATCCA

Product: carboxy-terminal processing protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MGSKLKQFGLVMTGVVAGVMISLNFSANADKAALAPLPVEELRAFADVFNAIKQGYVEPVEDKKLVTHAISGMLSGLDPH
SAYLDAEAFKDLQVGTQGEFGGLGIEVGMEDGFVKVVSPIEDTPAYRAGVKAGDLIVKLDDTPVKGMNLNDAVKRMRGKP
KTDITLTIMRKGESRPIVLTLTREVIKVQSVKSKVIEPGYGYVRVAQFQENTGASLVQHLDKLSKEGQLKGLVLDLRNDP
GGLLNGAVGVAAAFLPPEAQVVSTDGRTEDAKRQYRATPEDYLRGSRDDYLKALPRGIKDVPMVVLVNGGSASASEIVAG
ALQDHKRAVVMGTQTFGKGSVQTILPLNGNTAIKLTTARYYTPSGRSIQAKGIEPDIVVEEGANGSARRVREADLQGHLG
NDRDPEAERKLQATKNGEHKPGEDDDEAQPRFEIAGKDDNQLAQAINLLKGLQIVQNKK

Sequences:

>Translated_459_residues
MGSKLKQFGLVMTGVVAGVMISLNFSANADKAALAPLPVEELRAFADVFNAIKQGYVEPVEDKKLVTHAISGMLSGLDPH
SAYLDAEAFKDLQVGTQGEFGGLGIEVGMEDGFVKVVSPIEDTPAYRAGVKAGDLIVKLDDTPVKGMNLNDAVKRMRGKP
KTDITLTIMRKGESRPIVLTLTREVIKVQSVKSKVIEPGYGYVRVAQFQENTGASLVQHLDKLSKEGQLKGLVLDLRNDP
GGLLNGAVGVAAAFLPPEAQVVSTDGRTEDAKRQYRATPEDYLRGSRDDYLKALPRGIKDVPMVVLVNGGSASASEIVAG
ALQDHKRAVVMGTQTFGKGSVQTILPLNGNTAIKLTTARYYTPSGRSIQAKGIEPDIVVEEGANGSARRVREADLQGHLG
NDRDPEAERKLQATKNGEHKPGEDDDEAQPRFEIAGKDDNQLAQAINLLKGLQIVQNKK
>Mature_458_residues
GSKLKQFGLVMTGVVAGVMISLNFSANADKAALAPLPVEELRAFADVFNAIKQGYVEPVEDKKLVTHAISGMLSGLDPHS
AYLDAEAFKDLQVGTQGEFGGLGIEVGMEDGFVKVVSPIEDTPAYRAGVKAGDLIVKLDDTPVKGMNLNDAVKRMRGKPK
TDITLTIMRKGESRPIVLTLTREVIKVQSVKSKVIEPGYGYVRVAQFQENTGASLVQHLDKLSKEGQLKGLVLDLRNDPG
GLLNGAVGVAAAFLPPEAQVVSTDGRTEDAKRQYRATPEDYLRGSRDDYLKALPRGIKDVPMVVLVNGGSASASEIVAGA
LQDHKRAVVMGTQTFGKGSVQTILPLNGNTAIKLTTARYYTPSGRSIQAKGIEPDIVVEEGANGSARRVREADLQGHLGN
DRDPEAERKLQATKNGEHKPGEDDDEAQPRFEIAGKDDNQLAQAINLLKGLQIVQNKK

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=340, Percent_Identity=29.4117647058824, Blast_Score=116, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 49256; Mature: 49125

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSKLKQFGLVMTGVVAGVMISLNFSANADKAALAPLPVEELRAFADVFNAIKQGYVEPV
CCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCC
EDKKLVTHAISGMLSGLDPHSAYLDAEAFKDLQVGTQGEFGGLGIEVGMEDGFVKVVSPI
CHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCC
EDTPAYRAGVKAGDLIVKLDDTPVKGMNLNDAVKRMRGKPKTDITLTIMRKGESRPIVLT
CCCCHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEE
LTREVIKVQSVKSKVIEPGYGYVRVAQFQENTGASLVQHLDKLSKEGQLKGLVLDLRNDP
ECHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEECCCC
GGLLNGAVGVAAAFLPPEAQVVSTDGRTEDAKRQYRATPEDYLRGSRDDYLKALPRGIKD
CCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCCC
VPMVVLVNGGSASASEIVAGALQDHKRAVVMGTQTFGKGSVQTILPLNGNTAIKLTTARY
CCEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCEEEEEEEEEE
YTPSGRSIQAKGIEPDIVVEEGANGSARRVREADLQGHLGNDRDPEAERKLQATKNGEHK
ECCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
PGEDDDEAQPRFEIAGKDDNQLAQAINLLKGLQIVQNKK
CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GSKLKQFGLVMTGVVAGVMISLNFSANADKAALAPLPVEELRAFADVFNAIKQGYVEPV
CCCHHHHHHHHHHHHHHEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCC
EDKKLVTHAISGMLSGLDPHSAYLDAEAFKDLQVGTQGEFGGLGIEVGMEDGFVKVVSPI
CHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCC
EDTPAYRAGVKAGDLIVKLDDTPVKGMNLNDAVKRMRGKPKTDITLTIMRKGESRPIVLT
CCCCHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEE
LTREVIKVQSVKSKVIEPGYGYVRVAQFQENTGASLVQHLDKLSKEGQLKGLVLDLRNDP
ECHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEECCCC
GGLLNGAVGVAAAFLPPEAQVVSTDGRTEDAKRQYRATPEDYLRGSRDDYLKALPRGIKD
CCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCCC
VPMVVLVNGGSASASEIVAGALQDHKRAVVMGTQTFGKGSVQTILPLNGNTAIKLTTARY
CCEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCEEEEEEEEEE
YTPSGRSIQAKGIEPDIVVEEGANGSARRVREADLQGHLGNDRDPEAERKLQATKNGEHK
ECCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
PGEDDDEAQPRFEIAGKDDNQLAQAINLLKGLQIVQNKK
CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]