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The map label for this gene is flgF [H]

Identifier: 119899026

GI number: 119899026

Start: 3019571

End: 3020308

Strand: Reverse

Name: flgF [H]

Synonym: azo2736

Alternate gene names: 119899026

Gene position: 3020308-3019571 (Counterclockwise)

Preceding gene: 119899027

Following gene: 119899025

Centisome position: 69.02

GC content: 68.43

Gene sequence:

>738_bases
ATGGATCGGCTGATCTACACCGCGATGACCGGGGCCAAGGGCACGCTCGACCAGCAGGCAGCGGTCTCGCACAACCTCGC
CAACGCCACCTCCACCGGCTTTCGCACCGAGATGCACAAGCTGCGCGCGGTGGAGGTCCAGACCGAGGCGATGCATACGC
GCGCCTTCACCGTGGATGCCAGCGTTGCCACTGACTACAGCGCCGGCCCGCTGCAATTCACCGGCCGCCCGTACGACGTC
GCGGTGGAAGGCAAGGGCTGGCTGACCGTGCAGATGCCCGACGGCACCGAGGCCTACACCCGCGATGGCAGCCTGGAGCT
GAGCGCCAACGGCGTGCTGCAGACGCGCAGCGGGCTGCCGGTGCTCGGGGCCAGCGGCGCGCCGATCGCGCTGCCGCCCG
ATACCGAGATCGTGATCGGCGCCGACGGCACCATCTCCTCGCTGCAGGCCGGCCAGAACGTGGTGAACGTGGTCGATCAG
CTCAAGCTGGTCAATCCGCCCGAAGCCACACTGGTGCGGGGCGACGACGGTCTGTTCCGCACCGGCGACGGGGCGGCACA
GGCTGCCGATCCGGCGGTAAAAGTTGCCGGCGGCTACCTCGAAGGCAGCAACGTGAACGTGGTCGACCAGATGGTCACGA
TGATTTCGCTGGCCCGCCAGTTCGAGATGCAGACCCGCATGCTGCAGACCGCCGAGCAGAACGACCGCGCCGCCGCCCAG
GTGCTGTCGCTGAGCTGA

Upstream 100 bases:

>100_bases
CGCAACTACCAGGCCAACGCGCAATCGATCCGCACCCAGGACCAGATTCTCCAGACCCTGGTGAACCTGCGTTAAACGCT
GAAGGCGCAAGGAGAGCGAC

Downstream 100 bases:

>100_bases
TCCCCGTCGCGGATTAGCACGGATTTTGCCTAGTTAATCGCAGGATGGCCGGCAGCCTTGCCGGCCTAGACTGGCAACCA
GGCTACCCGACCACCGCGCG

Product: flagellar basal-body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MDRLIYTAMTGAKGTLDQQAAVSHNLANATSTGFRTEMHKLRAVEVQTEAMHTRAFTVDASVATDYSAGPLQFTGRPYDV
AVEGKGWLTVQMPDGTEAYTRDGSLELSANGVLQTRSGLPVLGASGAPIALPPDTEIVIGADGTISSLQAGQNVVNVVDQ
LKLVNPPEATLVRGDDGLFRTGDGAAQAADPAVKVAGGYLEGSNVNVVDQMVTMISLARQFEMQTRMLQTAEQNDRAAAQ
VLSLS

Sequences:

>Translated_245_residues
MDRLIYTAMTGAKGTLDQQAAVSHNLANATSTGFRTEMHKLRAVEVQTEAMHTRAFTVDASVATDYSAGPLQFTGRPYDV
AVEGKGWLTVQMPDGTEAYTRDGSLELSANGVLQTRSGLPVLGASGAPIALPPDTEIVIGADGTISSLQAGQNVVNVVDQ
LKLVNPPEATLVRGDDGLFRTGDGAAQAADPAVKVAGGYLEGSNVNVVDQMVTMISLARQFEMQTRMLQTAEQNDRAAAQ
VLSLS
>Mature_245_residues
MDRLIYTAMTGAKGTLDQQAAVSHNLANATSTGFRTEMHKLRAVEVQTEAMHTRAFTVDASVATDYSAGPLQFTGRPYDV
AVEGKGWLTVQMPDGTEAYTRDGSLELSANGVLQTRSGLPVLGASGAPIALPPDTEIVIGADGTISSLQAGQNVVNVVDQ
LKLVNPPEATLVRGDDGLFRTGDGAAQAADPAVKVAGGYLEGSNVNVVDQMVTMISLARQFEMQTRMLQTAEQNDRAAAQ
VLSLS

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=253, Percent_Identity=45.4545454545455, Blast_Score=200, Evalue=6e-53,
Organism=Escherichia coli, GI1787318, Length=258, Percent_Identity=32.1705426356589, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25751; Mature: 25751

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLIYTAMTGAKGTLDQQAAVSHNLANATSTGFRTEMHKLRAVEVQTEAMHTRAFTVDA
CCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHEEEEEHHHHEEEEEEEEC
SVATDYSAGPLQFTGRPYDVAVEGKGWLTVQMPDGTEAYTRDGSLELSANGVLQTRSGLP
HHCCCCCCCCEEECCCCEEEEECCCCEEEEECCCCCHHHCCCCCEEEECCCEEEECCCCE
VLGASGAPIALPPDTEIVIGADGTISSLQAGQNVVNVVDQLKLVNPPEATLVRGDDGLFR
EEECCCCCEEECCCCEEEEECCCCHHHHHHCHHHHHHHHHHCCCCCCCCEEEECCCCCEE
TGDGAAQAADPAVKVAGGYLEGSNVNVVDQMVTMISLARQFEMQTRMLQTAEQNDRAAAQ
CCCCCCCCCCCCEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
VLSLS
EEECC
>Mature Secondary Structure
MDRLIYTAMTGAKGTLDQQAAVSHNLANATSTGFRTEMHKLRAVEVQTEAMHTRAFTVDA
CCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHEEEEEHHHHEEEEEEEEC
SVATDYSAGPLQFTGRPYDVAVEGKGWLTVQMPDGTEAYTRDGSLELSANGVLQTRSGLP
HHCCCCCCCCEEECCCCEEEEECCCCEEEEECCCCCHHHCCCCCEEEECCCEEEECCCCE
VLGASGAPIALPPDTEIVIGADGTISSLQAGQNVVNVVDQLKLVNPPEATLVRGDDGLFR
EEECCCCCEEECCCCEEEEECCCCHHHHHHCHHHHHHHHHHCCCCCCCCEEEECCCCCEE
TGDGAAQAADPAVKVAGGYLEGSNVNVVDQMVTMISLARQFEMQTRMLQTAEQNDRAAAQ
CCCCCCCCCCCCEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
VLSLS
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]