Click here to switch to the map view.

The map label for this gene is flgH

Identifier: 119899024

GI number: 119899024

Start: 3017950

End: 3018627

Strand: Reverse

Name: flgH

Synonym: azo2734

Alternate gene names: 119899024

Gene position: 3018627-3017950 (Counterclockwise)

Preceding gene: 119899025

Following gene: 119899023

Centisome position: 68.98

GC content: 67.4

Gene sequence:

>678_bases
ATGAAAGCGCTCGCCCTCCTTGCCGTCCTGCTGCTGTCGGGCTGCGCGTCGATCTATTCGACGCCGCCCACCGCGATCCA
CCAGCCGATGAGCGCGCGCCCCGACATGCGCGCCCAGGCGGTGCCGGCCACCGGCAGCATCTACCAGCCCAGCCAGGCCC
GGCCCTTGTTCGAGGACCGGCGCGCGCGCAACGTCGGCGACATCATCACGATCAACCTCGTGGAGCGGAACACCGCGCAG
AAGAGCGCCAACGCCTCGGCCACCCGCGGCTCGGCGATCACCGGCGGCATCAGCCTGACCGCGCCCAACATCGCCTCGCT
CGCCAACGCCAAGCTCAACGGCCTGCAGGCGGATGTGGGCCTGGATTCCGACTTCTCCGGCGAGGGCGCGGCGGCAGCCA
ACAACGTCTTCAACGGCACGATCTCGGTCACCGTCATCGACGTCTATCCCAACGGCAACCTGCTGGTGTCGGGCGAGAAG
ATGGTCGCGATCAACCAGGGCAACGAGTTCATCCGCTTCTCGGGCGTGATCAACCCGACCACCGTCACCGCCGCCAACAC
CGTGCAATCCACCCAGGTGGCCGACGCCCGCATCGAATACCGCGGCAGCGGCTTCATCGACGAGTCCAACACCATGGGCT
GGCTGCAACGCTTCTTCGTCGCCATCGCGCCGTTCTGA

Upstream 100 bases:

>100_bases
ACCCAGCGCGCCTACGAGATGAATTCGCGCGCGATCCAGACGTCCGACTCGATGCTGGGCCGGCTGACCCAGCTTTGATC
GCCGCGCCGGGAGTTTCGCC

Downstream 100 bases:

>100_bases
TCCGCACTACGGAGTCCCCATGAAACGCCCGGCCCAGTTTCTCCTTGCCCTGCTCGCCGCCGTCGGCATGGCGGTGGCGG
CCCCCGCGAGCGCCGAGCGC

Product: flagellar L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKALALLAVLLLSGCASIYSTPPTAIHQPMSARPDMRAQAVPATGSIYQPSQARPLFEDRRARNVGDIITINLVERNTAQ
KSANASATRGSAITGGISLTAPNIASLANAKLNGLQADVGLDSDFSGEGAAAANNVFNGTISVTVIDVYPNGNLLVSGEK
MVAINQGNEFIRFSGVINPTTVTAANTVQSTQVADARIEYRGSGFIDESNTMGWLQRFFVAIAPF

Sequences:

>Translated_225_residues
MKALALLAVLLLSGCASIYSTPPTAIHQPMSARPDMRAQAVPATGSIYQPSQARPLFEDRRARNVGDIITINLVERNTAQ
KSANASATRGSAITGGISLTAPNIASLANAKLNGLQADVGLDSDFSGEGAAAANNVFNGTISVTVIDVYPNGNLLVSGEK
MVAINQGNEFIRFSGVINPTTVTAANTVQSTQVADARIEYRGSGFIDESNTMGWLQRFFVAIAPF
>Mature_225_residues
MKALALLAVLLLSGCASIYSTPPTAIHQPMSARPDMRAQAVPATGSIYQPSQARPLFEDRRARNVGDIITINLVERNTAQ
KSANASATRGSAITGGISLTAPNIASLANAKLNGLQADVGLDSDFSGEGAAAANNVFNGTISVTVIDVYPNGNLLVSGEK
MVAINQGNEFIRFSGVINPTTVTAANTVQSTQVADARIEYRGSGFIDESNTMGWLQRFFVAIAPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family

Homologues:

Organism=Escherichia coli, GI1787319, Length=227, Percent_Identity=48.8986784140969, Blast_Score=179, Evalue=2e-46,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGH_AZOSB (A1K945)

Other databases:

- EMBL:   AM406670
- RefSeq:   YP_934237.1
- STRING:   A1K945
- GeneID:   4608784
- GenomeReviews:   AM406670_GR
- KEGG:   azo:azo2734
- eggNOG:   COG2063
- HOGENOM:   HBG507455
- OMA:   IAGEKQI
- PhylomeDB:   A1K945
- ProtClustDB:   CLSK2487460
- BioCyc:   ASP62928:AZO2734-MONOMER
- HAMAP:   MF_00415
- InterPro:   IPR000527
- PRINTS:   PR01008

Pfam domain/function: PF02107 FlgH

EC number: NA

Molecular weight: Translated: 23588; Mature: 23588

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALALLAVLLLSGCASIYSTPPTAIHQPMSARPDMRAQAVPATGSIYQPSQARPLFEDR
CHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHH
RARNVGDIITINLVERNTAQKSANASATRGSAITGGISLTAPNIASLANAKLNGLQADVG
HCCCCCCEEEEEEEECCCCHHCCCCCCCCCCEEECCEEEECCCHHHHHCCCCCCEEECCC
LDSDFSGEGAAAANNVFNGTISVTVIDVYPNGNLLVSGEKMVAINQGNEFIRFSGVINPT
CCCCCCCCCCCCCCCEECCEEEEEEEEEECCCCEEECCCEEEEEECCCCEEEEECCCCCC
TVTAANTVQSTQVADARIEYRGSGFIDESNTMGWLQRFFVAIAPF
EEEECCCCCCCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKALALLAVLLLSGCASIYSTPPTAIHQPMSARPDMRAQAVPATGSIYQPSQARPLFEDR
CHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHH
RARNVGDIITINLVERNTAQKSANASATRGSAITGGISLTAPNIASLANAKLNGLQADVG
HCCCCCCEEEEEEEECCCCHHCCCCCCCCCCEEECCEEEECCCHHHHHCCCCCCEEECCC
LDSDFSGEGAAAANNVFNGTISVTVIDVYPNGNLLVSGEKMVAINQGNEFIRFSGVINPT
CCCCCCCCCCCCCCCEECCEEEEEEEEEECCCCEEECCCEEEEEECCCCEEEEECCCCCC
TVTAANTVQSTQVADARIEYRGSGFIDESNTMGWLQRFFVAIAPF
EEEECCCCCCCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA