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The map label for this gene is pimF [H]

Identifier: 119898971

GI number: 119898971

Start: 2954944

End: 2955885

Strand: Reverse

Name: pimF [H]

Synonym: azo2680

Alternate gene names: 119898971

Gene position: 2955885-2954944 (Counterclockwise)

Preceding gene: 119898972

Following gene: 119898970

Centisome position: 67.55

GC content: 53.4

Gene sequence:

>942_bases
ATGAAGCTGTCTCTGGTTGCCACACTCTACCGCTCGGCCGAATTTGTCGTGGAGTTCCATCTCCGTATAAGCCAGGCGGC
ACAACAACTGGTCGGAGACGATTATGAGATCGTATTCGTCAACGACGGCTCTCCTGATTCAAGCCTGGAACTTGCTGCGC
AACTAAGCGAAGTCGACTACCACGTTGTAGTGGTTGATCTCTCGCGCAATTTCGGCCATCACCATGCCATGATGACGGGC
CTGCGGCATGCTCGCGGTGAACGCGTCTTCCTGATCGATAGCGACTTGGAAGAGGATCCTGCATGGTTGCTCTCGTTCAG
TGAGCAGATGGAGCGCGAGAAGGTCGATGTGGTCTACGGAGTCCAAAAGCAGCGGAAAGGCAAATACTTCGAGCGCTGGA
CCGGTCGGTTGTTCTACAAACTATTCCGTTTCCTTAGCGGGCTGGAGGTGCCCGACAACATTGTTGTCGCTAGGCTGATG
TCTCGCCGATATGTGGATGCGTTGACCCAGCATGACGAGCGCGAGTTGTTTATGGCAGGTCTTTGGGTCATCACCGGCTT
TGAGCAGCGTGCGCAGTTTATCATCAAGCGCAGCCGTGACGAAACGACCTACACACTGAGAAAGAAAGTGGCGCAACTGG
TGAATTCGATTACCGCCTTCAGCAGTGCACCGTTAGTTGGCATTTTCGGCGTAGGTTGCGCGATCTTCCTGCTATCGGCT
ATCTACACGTGCTTTCTTGTCATCAACTGGTTGTTCTTGGGGAGCCCACCTAGCGGCTATACGTCATTAATGGCTTCAAT
CTGGTTGCTAGGCGGTTTGGTCATCGCATTCGTCGGCGTAGTCGGGATTTATCTCGCCAAGGTCTATTCCGAAGTCAAAC
ATAGACCCAATACTATCGTCCGAAACATCTACCGCCAGACCGGGGGGCGGAGCGTAGAATGA

Upstream 100 bases:

>100_bases
ATCCGCAACTCTGGGGGGCGTTCGTCCACGGCGTCACCGTCCTTGATCAGCTGTTCAATTGCGGCAAAGACGCGCGCCGT
TACATGAGGCATGTCAAAGT

Downstream 100 bases:

>100_bases
AAAAACTAATTATTTTTGGCCTTACCGACGCAGCGGAACTCGCACTCTATTATTTTTCCAACGACTCCGACTATCAGGTC
GAGGCGTTTGCCGTCGACCC

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKLSLVATLYRSAEFVVEFHLRISQAAQQLVGDDYEIVFVNDGSPDSSLELAAQLSEVDYHVVVVDLSRNFGHHHAMMTG
LRHARGERVFLIDSDLEEDPAWLLSFSEQMEREKVDVVYGVQKQRKGKYFERWTGRLFYKLFRFLSGLEVPDNIVVARLM
SRRYVDALTQHDERELFMAGLWVITGFEQRAQFIIKRSRDETTYTLRKKVAQLVNSITAFSSAPLVGIFGVGCAIFLLSA
IYTCFLVINWLFLGSPPSGYTSLMASIWLLGGLVIAFVGVVGIYLAKVYSEVKHRPNTIVRNIYRQTGGRSVE

Sequences:

>Translated_313_residues
MKLSLVATLYRSAEFVVEFHLRISQAAQQLVGDDYEIVFVNDGSPDSSLELAAQLSEVDYHVVVVDLSRNFGHHHAMMTG
LRHARGERVFLIDSDLEEDPAWLLSFSEQMEREKVDVVYGVQKQRKGKYFERWTGRLFYKLFRFLSGLEVPDNIVVARLM
SRRYVDALTQHDERELFMAGLWVITGFEQRAQFIIKRSRDETTYTLRKKVAQLVNSITAFSSAPLVGIFGVGCAIFLLSA
IYTCFLVINWLFLGSPPSGYTSLMASIWLLGGLVIAFVGVVGIYLAKVYSEVKHRPNTIVRNIYRQTGGRSVE
>Mature_313_residues
MKLSLVATLYRSAEFVVEFHLRISQAAQQLVGDDYEIVFVNDGSPDSSLELAAQLSEVDYHVVVVDLSRNFGHHHAMMTG
LRHARGERVFLIDSDLEEDPAWLLSFSEQMEREKVDVVYGVQKQRKGKYFERWTGRLFYKLFRFLSGLEVPDNIVVARLM
SRRYVDALTQHDERELFMAGLWVITGFEQRAQFIIKRSRDETTYTLRKKVAQLVNSITAFSSAPLVGIFGVGCAIFLLSA
IYTCFLVINWLFLGSPPSGYTSLMASIWLLGGLVIAFVGVVGIYLAKVYSEVKHRPNTIVRNIYRQTGGRSVE

Specific function: May play only a redundant role in maintaining cell wall viability and bacterial virulence [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=309, Percent_Identity=30.7443365695793, Blast_Score=140, Evalue=8e-35,
Organism=Escherichia coli, GI1788588, Length=313, Percent_Identity=27.1565495207668, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 35579; Mature: 35579

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSLVATLYRSAEFVVEFHLRISQAAQQLVGDDYEIVFVNDGSPDSSLELAAQLSEVDY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCE
HVVVVDLSRNFGHHHAMMTGLRHARGERVFLIDSDLEEDPAWLLSFSEQMEREKVDVVYG
EEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC
VQKQRKGKYFERWTGRLFYKLFRFLSGLEVPDNIVVARLMSRRYVDALTQHDERELFMAG
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LWVITGFEQRAQFIIKRSRDETTYTLRKKVAQLVNSITAFSSAPLVGIFGVGCAIFLLSA
HHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IYTCFLVINWLFLGSPPSGYTSLMASIWLLGGLVIAFVGVVGIYLAKVYSEVKHRPNTIV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RNIYRQTGGRSVE
HHHHHHCCCCCCC
>Mature Secondary Structure
MKLSLVATLYRSAEFVVEFHLRISQAAQQLVGDDYEIVFVNDGSPDSSLELAAQLSEVDY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCE
HVVVVDLSRNFGHHHAMMTGLRHARGERVFLIDSDLEEDPAWLLSFSEQMEREKVDVVYG
EEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC
VQKQRKGKYFERWTGRLFYKLFRFLSGLEVPDNIVVARLMSRRYVDALTQHDERELFMAG
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LWVITGFEQRAQFIIKRSRDETTYTLRKKVAQLVNSITAFSSAPLVGIFGVGCAIFLLSA
HHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IYTCFLVINWLFLGSPPSGYTSLMASIWLLGGLVIAFVGVVGIYLAKVYSEVKHRPNTIV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RNIYRQTGGRSVE
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]