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The map label for this gene is soxR [C]

Identifier: 119898909

GI number: 119898909

Start: 2899574

End: 2900011

Strand: Reverse

Name: soxR [C]

Synonym: azo2618

Alternate gene names: 119898909

Gene position: 2900011-2899574 (Counterclockwise)

Preceding gene: 119898911

Following gene: 119898908

Centisome position: 66.27

GC content: 70.55

Gene sequence:

>438_bases
ATGTCGCTCGATATCGCGGAGGTCGCGCGGCAGTCCGGCGTGCCGGCCTCCACACTGCGCTACTACGAAGAAAAGGGGTT
GATTGCCGCGCTCGGACGGCAGGGCCAGCGGCGTGTGTTTGCCGATGGCGTGCTGGAGCGGCTGGCGCTGATCGCGCTCG
GACGGGCGTCGGGCTTTTCGCTGGACGAGATCGCGGCGATGTTCGCACCCGACGGCGGCCTGCAGATCGACCGCGCGCTG
CTGCGGCGCCGTGCGGACGAGCTGGATCAGCGGATACGCCAGCTTTCCGCCATGCGTGACGGTCTGCGCCACGCGGCGCA
GTGTTCCGCCCCCAGCCACCTCGAGTGCCCCACCTTTCGCCGCATCTTGCGCGCGGCGGCCATCGGCGCGCTTGGCCCGC
GTCCTCGGCAAACGCCGCGCCGCCCTGGAGCAACATGA

Upstream 100 bases:

>100_bases
TTGTTGCCGCTGTCGTATGTCTTGTTCATGATCGGGTTCCTGTCCTCGAAAACGTCGTGCTGCTATCTTGCAAGTTCAAG
TCGACTTGAGGTCAAGCGCC

Downstream 100 bases:

>100_bases
AGTATCGACTCGCGATTTTTGATTTCGACGGCACGCTGGCGGATTCCTTTCCGTTCTTCGTGCGGGTGTTCAACCACGTG
GCCGAGCAGCACGCCTTCCG

Product: redox-sensitive transcriptional activator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Cu(I)-Responsive Transcriptional Regulator; Regulatory Protein; Regulatory Protein MerR; Redox-Sensitive Transcriptional Activator; MerR Family Regulatory Protein; MerR-Family Transcriptional Regulator; SoxR Family Transcriptional Regulator; Transcriptional Regulator Merr Family; MerR Family Regulatory Family

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSLDIAEVARQSGVPASTLRYYEEKGLIAALGRQGQRRVFADGVLERLALIALGRASGFSLDEIAAMFAPDGGLQIDRAL
LRRRADELDQRIRQLSAMRDGLRHAAQCSAPSHLECPTFRRILRAAAIGALGPRPRQTPRRPGAT

Sequences:

>Translated_145_residues
MSLDIAEVARQSGVPASTLRYYEEKGLIAALGRQGQRRVFADGVLERLALIALGRASGFSLDEIAAMFAPDGGLQIDRAL
LRRRADELDQRIRQLSAMRDGLRHAAQCSAPSHLECPTFRRILRAAAIGALGPRPRQTPRRPGAT
>Mature_144_residues
SLDIAEVARQSGVPASTLRYYEEKGLIAALGRQGQRRVFADGVLERLALIALGRASGFSLDEIAAMFAPDGGLQIDRALL
RRRADELDQRIRQLSAMRDGLRHAAQCSAPSHLECPTFRRILRAAAIGALGPRPRQTPRRPGAT

Specific function: Activates The Transcription Of The Soxs Gene Which Itself Controls The Superoxide Response Regulon. Soxr Contains A 2fe-2s Iron-Sulfur Cluster That May Act As A Redox Sensor System That Recognizes Superoxide. The Variable Redox State Of The Fe-S Cluster I

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790498, Length=117, Percent_Identity=35.042735042735, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15814; Mature: 15683

Theoretical pI: Translated: 11.55; Mature: 11.55

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDIAEVARQSGVPASTLRYYEEKGLIAALGRQGQRRVFADGVLERLALIALGRASGFS
CCCCHHHHHHHCCCCHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
LDEIAAMFAPDGGLQIDRALLRRRADELDQRIRQLSAMRDGLRHAAQCSAPSHLECPTFR
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
RILRAAAIGALGPRPRQTPRRPGAT
HHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLDIAEVARQSGVPASTLRYYEEKGLIAALGRQGQRRVFADGVLERLALIALGRASGFS
CCCHHHHHHHCCCCHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
LDEIAAMFAPDGGLQIDRALLRRRADELDQRIRQLSAMRDGLRHAAQCSAPSHLECPTFR
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
RILRAAAIGALGPRPRQTPRRPGAT
HHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA