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The map label for this gene is palZ [H]

Identifier: 119898601

GI number: 119898601

Start: 2538956

End: 2540617

Strand: Reverse

Name: palZ [H]

Synonym: azo2310

Alternate gene names: 119898601

Gene position: 2540617-2538956 (Counterclockwise)

Preceding gene: 119898603

Following gene: 119898596

Centisome position: 58.06

GC content: 66.49

Gene sequence:

>1662_bases
ATGAAAACCGGATGGTGGCGCAACGCGGTGGTGTACCAGGTGTATCCCCGCAGCTTCATGGATTCCAACGGCGACGGCAT
CGGCGATCTGCCGGGCTTGCTGCAGCGGCTGGACTACCTGCAGTGGCTGGGGGTGACGGTGATCTGGCTGTGTCCGATGT
TCCGCTCGCCCAACGACGACAACGGCTACGACATCAGCGACTACCAGGACATCCATCCCGAATTCGGCACCATGGCCGAC
CTCGACCGCCTGCTGGAAGAACTGCACCGGCGCGGCATGCGGCTGGTGCTGGACCTGGTGCTGAACCACACCAGCGACGA
GCATCCGTGGTTCATCGAATCGCGCAGCTCGCGCGACAACCCCCGGCGCAACTGGTACGTCTGGCGCGACGGCCGCAACG
GCGGCCCGCCCAACAACTGGGAGAGCATCTTCAAGGGCTCGGCCTGGGCCTGGGACGAAGCCACCGGCCAGTATTACCTC
CACCTCTTCACCCGCCGCCAGCCGGACCTGAACTGGGAGAACCCCGAGGTGCGCACGGCCATGGCCGCCATGGTGCGCTG
GTGGCTGGACAAGGGCGTGGACGGCTTTCGCATCGACGCCGTCACCCACATGAAAAAGGCGCCCGGCTTTCCCGACGCGC
CCAATCCGCAGGGGCTGGAGTTTGCCCCCGCCTACGGCTGCCACATGTGCGTGCCCGGCGTGCTCGATTTCGTCGACGAA
CTGGCGCGGACATCCTTTGCCCGCTACGACGTGATGACCGTGGGCGAGGCCAACGGCGTTTCGGCCGCGCAGGCGGTGGA
ATGGGTGGGCGAAGACCGCGGCCGGCTCGACATGATCCTGCAGTTCGAGCACTGGCACCTGTGGTCCAACCAGCCCCGCG
TCGCGCTCGACGTGCGCGCGCTGAAGACCATCCTGACCCGCTGGCAACTCGCGCTGGCGGAAAGCGGCTGGAACGCCCTC
TACCTGGAAAACCACGACCTGCCGCGCGTGCTGTCGCGCTGGGGCGATACCGTCCGCTACCGCTACGAAAGCGCCACCGC
GCTCGCCGCCATGTACTTCCTGATGCGCGGCACGCCCTTCATCTACCAGGGCCAGGAACTCGGCATGGCCAACACCGTGT
TCACCAGCCTGGACGACTTCCGCGACCGCTTCGCCTACAACCGCATCGAACGCATGCGCGCCGCCGGCATGGACGACGCC
GACATCCTCGCGGAAATGTCACTGACCGCCCGCGACAACTCCCGCACTCCCATGCCCTGGAACAACGGCCCCAACGCTGG
CTTCACCACCGGCATCCCCTGGCTGGCGGTGAACCCGGAGTACCCGGCGATCAACGTCGCCACCGAACGGGAGGAGCCGC
GCTCGGTGCTCAACTTCTACCGCGCGCTGATCGCGCTGCGCACCACGGAGCCGGTACTGGCGCACGGCCGCTACCGCCTC
GTCGCCAAACGGCATCCGCAGGTTTATGCGTATCTGCGGGAGTCGGAAGAGGGGCGTTTTCTGGTGGTGTGCAATTTGAC
CGCGGAACCGGCGACGTTTTCACACCGGGCGTTTCCGTGGCAGCGGGTGAAGCTGCGGTTGGGGAATTATCCGACGCCGC
GGGATGAAGGGGAGTGGGGGGTGTTGAGGGCGTTTGAGGCGCGGGTGGTGGAGGTGGGGTAG

Upstream 100 bases:

>100_bases
TATTCGCCTCCTGTTCGTTTTGCACCGCCCAGGCACTGTGCAACAGCGACGTTGCGGCGGTCCAATTAGTCTCACAACGT
CTGATGACAGGATACTCGCC

Downstream 100 bases:

>100_bases
GGGGGCTGGCGCAGGTAGGTGAAAAGAATGTTGCGGGTTGAAGCGCTGAGTGGGAACAGGTCTTTTCGCAATCTAGGGGA
TGACGCGTTTTCGGCCTGAA

Product: putative alpha-D-1,4-glucosidase

Products: NA

Alternate protein names: Oligosaccharide alpha-1,6-glucosidase 3; Sucrase-isomaltase 3; Isomaltase 3 [H]

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MKTGWWRNAVVYQVYPRSFMDSNGDGIGDLPGLLQRLDYLQWLGVTVIWLCPMFRSPNDDNGYDISDYQDIHPEFGTMAD
LDRLLEELHRRGMRLVLDLVLNHTSDEHPWFIESRSSRDNPRRNWYVWRDGRNGGPPNNWESIFKGSAWAWDEATGQYYL
HLFTRRQPDLNWENPEVRTAMAAMVRWWLDKGVDGFRIDAVTHMKKAPGFPDAPNPQGLEFAPAYGCHMCVPGVLDFVDE
LARTSFARYDVMTVGEANGVSAAQAVEWVGEDRGRLDMILQFEHWHLWSNQPRVALDVRALKTILTRWQLALAESGWNAL
YLENHDLPRVLSRWGDTVRYRYESATALAAMYFLMRGTPFIYQGQELGMANTVFTSLDDFRDRFAYNRIERMRAAGMDDA
DILAEMSLTARDNSRTPMPWNNGPNAGFTTGIPWLAVNPEYPAINVATEREEPRSVLNFYRALIALRTTEPVLAHGRYRL
VAKRHPQVYAYLRESEEGRFLVVCNLTAEPATFSHRAFPWQRVKLRLGNYPTPRDEGEWGVLRAFEARVVEVG

Sequences:

>Translated_553_residues
MKTGWWRNAVVYQVYPRSFMDSNGDGIGDLPGLLQRLDYLQWLGVTVIWLCPMFRSPNDDNGYDISDYQDIHPEFGTMAD
LDRLLEELHRRGMRLVLDLVLNHTSDEHPWFIESRSSRDNPRRNWYVWRDGRNGGPPNNWESIFKGSAWAWDEATGQYYL
HLFTRRQPDLNWENPEVRTAMAAMVRWWLDKGVDGFRIDAVTHMKKAPGFPDAPNPQGLEFAPAYGCHMCVPGVLDFVDE
LARTSFARYDVMTVGEANGVSAAQAVEWVGEDRGRLDMILQFEHWHLWSNQPRVALDVRALKTILTRWQLALAESGWNAL
YLENHDLPRVLSRWGDTVRYRYESATALAAMYFLMRGTPFIYQGQELGMANTVFTSLDDFRDRFAYNRIERMRAAGMDDA
DILAEMSLTARDNSRTPMPWNNGPNAGFTTGIPWLAVNPEYPAINVATEREEPRSVLNFYRALIALRTTEPVLAHGRYRL
VAKRHPQVYAYLRESEEGRFLVVCNLTAEPATFSHRAFPWQRVKLRLGNYPTPRDEGEWGVLRAFEARVVEVG
>Mature_553_residues
MKTGWWRNAVVYQVYPRSFMDSNGDGIGDLPGLLQRLDYLQWLGVTVIWLCPMFRSPNDDNGYDISDYQDIHPEFGTMAD
LDRLLEELHRRGMRLVLDLVLNHTSDEHPWFIESRSSRDNPRRNWYVWRDGRNGGPPNNWESIFKGSAWAWDEATGQYYL
HLFTRRQPDLNWENPEVRTAMAAMVRWWLDKGVDGFRIDAVTHMKKAPGFPDAPNPQGLEFAPAYGCHMCVPGVLDFVDE
LARTSFARYDVMTVGEANGVSAAQAVEWVGEDRGRLDMILQFEHWHLWSNQPRVALDVRALKTILTRWQLALAESGWNAL
YLENHDLPRVLSRWGDTVRYRYESATALAAMYFLMRGTPFIYQGQELGMANTVFTSLDDFRDRFAYNRIERMRAAGMDDA
DILAEMSLTARDNSRTPMPWNNGPNAGFTTGIPWLAVNPEYPAINVATEREEPRSVLNFYRALIALRTTEPVLAHGRYRL
VAKRHPQVYAYLRESEEGRFLVVCNLTAEPATFSHRAFPWQRVKLRLGNYPTPRDEGEWGVLRAFEARVVEVG

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=557, Percent_Identity=30.5206463195691, Blast_Score=258, Evalue=7e-69,
Organism=Escherichia coli, GI1790687, Length=553, Percent_Identity=41.2296564195298, Blast_Score=428, Evalue=1e-121,
Organism=Escherichia coli, GI1786604, Length=197, Percent_Identity=32.48730964467, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1789995, Length=131, Percent_Identity=31.2977099236641, Blast_Score=63, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI32565753, Length=380, Percent_Identity=26.8421052631579, Blast_Score=133, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI25147709, Length=490, Percent_Identity=25.1020408163265, Blast_Score=122, Evalue=5e-28,
Organism=Saccharomyces cerevisiae, GI6322245, Length=546, Percent_Identity=36.4468864468864, Blast_Score=355, Evalue=1e-98,
Organism=Saccharomyces cerevisiae, GI6319776, Length=583, Percent_Identity=36.5351629502573, Blast_Score=347, Evalue=2e-96,
Organism=Saccharomyces cerevisiae, GI6321731, Length=583, Percent_Identity=36.3636363636364, Blast_Score=346, Evalue=4e-96,
Organism=Saccharomyces cerevisiae, GI6321726, Length=576, Percent_Identity=34.7222222222222, Blast_Score=346, Evalue=5e-96,
Organism=Saccharomyces cerevisiae, GI6324416, Length=576, Percent_Identity=34.2013888888889, Blast_Score=344, Evalue=2e-95,
Organism=Saccharomyces cerevisiae, GI6322241, Length=576, Percent_Identity=34.0277777777778, Blast_Score=340, Evalue=4e-94,
Organism=Saccharomyces cerevisiae, GI6322021, Length=576, Percent_Identity=34.0277777777778, Blast_Score=340, Evalue=4e-94,
Organism=Drosophila melanogaster, GI24583745, Length=537, Percent_Identity=36.4990689013035, Blast_Score=300, Evalue=2e-81,
Organism=Drosophila melanogaster, GI24583749, Length=494, Percent_Identity=36.6396761133603, Blast_Score=288, Evalue=5e-78,
Organism=Drosophila melanogaster, GI24583747, Length=494, Percent_Identity=36.6396761133603, Blast_Score=288, Evalue=6e-78,
Organism=Drosophila melanogaster, GI24586587, Length=529, Percent_Identity=35.7277882797732, Blast_Score=278, Evalue=5e-75,
Organism=Drosophila melanogaster, GI24586597, Length=553, Percent_Identity=34.1772151898734, Blast_Score=278, Evalue=9e-75,
Organism=Drosophila melanogaster, GI221330053, Length=537, Percent_Identity=34.4506517690875, Blast_Score=277, Evalue=2e-74,
Organism=Drosophila melanogaster, GI24586593, Length=501, Percent_Identity=36.3273453093812, Blast_Score=276, Evalue=3e-74,
Organism=Drosophila melanogaster, GI24586589, Length=521, Percent_Identity=35.3166986564299, Blast_Score=268, Evalue=6e-72,
Organism=Drosophila melanogaster, GI24586591, Length=523, Percent_Identity=34.225621414914, Blast_Score=264, Evalue=1e-70,
Organism=Drosophila melanogaster, GI45549022, Length=549, Percent_Identity=32.4225865209472, Blast_Score=259, Evalue=5e-69,
Organism=Drosophila melanogaster, GI24586599, Length=220, Percent_Identity=47.7272727272727, Blast_Score=218, Evalue=1e-56,
Organism=Drosophila melanogaster, GI281360393, Length=446, Percent_Identity=33.6322869955157, Blast_Score=203, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.10 [H]

Molecular weight: Translated: 63809; Mature: 63809

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTGWWRNAVVYQVYPRSFMDSNGDGIGDLPGLLQRLDYLQWLGVTVIWLCPMFRSPNDD
CCCCCCCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NGYDISDYQDIHPEFGTMADLDRLLEELHRRGMRLVLDLVLNHTSDEHPWFIESRSSRDN
CCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
PRRNWYVWRDGRNGGPPNNWESIFKGSAWAWDEATGQYYLHLFTRRQPDLNWENPEVRTA
CCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHH
MAAMVRWWLDKGVDGFRIDAVTHMKKAPGFPDAPNPQGLEFAPAYGCHMCVPGVLDFVDE
HHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHH
LARTSFARYDVMTVGEANGVSAAQAVEWVGEDRGRLDMILQFEHWHLWSNQPRVALDVRA
HHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCEEEHHHH
LKTILTRWQLALAESGWNALYLENHDLPRVLSRWGDTVRYRYESATALAAMYFLMRGTPF
HHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCE
IYQGQELGMANTVFTSLDDFRDRFAYNRIERMRAAGMDDADILAEMSLTARDNSRTPMPW
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEECCCCCCCCCC
NNGPNAGFTTGIPWLAVNPEYPAINVATEREEPRSVLNFYRALIALRTTEPVLAHGRYRL
CCCCCCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHCCCEEE
VAKRHPQVYAYLRESEEGRFLVVCNLTAEPATFSHRAFPWQRVKLRLGNYPTPRDEGEWG
EECCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHEEECCCCCCCCCCCCH
VLRAFEARVVEVG
HHEEEEEEEEECC
>Mature Secondary Structure
MKTGWWRNAVVYQVYPRSFMDSNGDGIGDLPGLLQRLDYLQWLGVTVIWLCPMFRSPNDD
CCCCCCCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NGYDISDYQDIHPEFGTMADLDRLLEELHRRGMRLVLDLVLNHTSDEHPWFIESRSSRDN
CCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
PRRNWYVWRDGRNGGPPNNWESIFKGSAWAWDEATGQYYLHLFTRRQPDLNWENPEVRTA
CCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHH
MAAMVRWWLDKGVDGFRIDAVTHMKKAPGFPDAPNPQGLEFAPAYGCHMCVPGVLDFVDE
HHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHH
LARTSFARYDVMTVGEANGVSAAQAVEWVGEDRGRLDMILQFEHWHLWSNQPRVALDVRA
HHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCEEEHHHH
LKTILTRWQLALAESGWNALYLENHDLPRVLSRWGDTVRYRYESATALAAMYFLMRGTPF
HHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCE
IYQGQELGMANTVFTSLDDFRDRFAYNRIERMRAAGMDDADILAEMSLTARDNSRTPMPW
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEECCCCCCCCCC
NNGPNAGFTTGIPWLAVNPEYPAINVATEREEPRSVLNFYRALIALRTTEPVLAHGRYRL
CCCCCCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHCCCEEE
VAKRHPQVYAYLRESEEGRFLVVCNLTAEPATFSHRAFPWQRVKLRLGNYPTPRDEGEWG
EECCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHEEECCCCCCCCCCCCH
VLRAFEARVVEVG
HHEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]