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The map label for this gene is yafJ [C]

Identifier: 119898581

GI number: 119898581

Start: 2509855

End: 2510652

Strand: Direct

Name: yafJ [C]

Synonym: azo2290

Alternate gene names: 119898581

Gene position: 2509855-2510652 (Clockwise)

Preceding gene: 119898580

Following gene: 119898582

Centisome position: 57.35

GC content: 68.3

Gene sequence:

>798_bases
ATGTGCCAATTGCTTGGAATGAATTGCAACAAGCCCGCCACGCTCCAGTTTTCGCTGGAGGGCTTTGTGCAGCGCGGCGG
AGGCACTGACGAGCATCGCGACGGCTGGGGCATCGGCTACTTCGACGGCGACGGCGCCCACGTCTTCCGTGACGCCAATC
CTGCCGCCACCTCGCCCGCGTGCCGCTACTGCGGCCAGCGTTTCCGCTCGCGCAACATCATTGCCCACATCCGCAAGGCC
ACCCAGGGCGAGATCCGGCTGGAGAACTGCCACCCCTTCCGCGGCCGGCTGTGGGGGCGCGACTGGCTGTTCGCGCACAA
CGGCAATCTGGAGGGCTTCCGCCCGCCGCTTGCGGGCCGCCAGCCGCAAGGCACCACCGACAGCGAGCACGCCTTCCACT
ACCTGCTCGAACAGCTCACCTTGCGTTTCGGCGACATTCCGCCCGCGCTGGCCGACCTGCGCGACGCGCTGCACACCCTG
TCCGAACGGATCGCGCGCCACGGCACCTTCAACTACTTGCTGTCCTGCGGCGAACGCATGTTCGCCCACTGCAGCACCGA
CCTGCACTACGTGGTGCGCGCCTACCCTTTCCGTTCCGCCCGGCTGCTGGACTGCGACCGCGCGATCGACTTCGCGCGCC
ACAACCATCTCGACGACCGCATGGCGGTGGTCACCACCCGGCCGCTGACCGCGGACGAAGACTGGCACCGGCTGCCGGCC
GGCTCGCTCACGCTGTTTGCTGACGGCCAGCGCCAGGACGACTGCGTGCGGCGGCGCGAGGTGCAGCTCGCGGTATAA

Upstream 100 bases:

>100_bases
CCACAGTTTCGTCATCGCTGCGTAGTAAATCACGGATCCTTGGTTGGCACAGGTCACTGATTTGGCGATCATTCTGTGCA
GTGCAGCAGAAGATCGCCCC

Downstream 100 bases:

>100_bases
GCTGCGCCGATGAGCGAGTTCACCGACCATCTCGTCGAAACCTTCGCCGCGCTGGGCGCGGTGCGCGCGCGGCGCATGTT
CGGCGGGCACGGGCTTTACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MCQLLGMNCNKPATLQFSLEGFVQRGGGTDEHRDGWGIGYFDGDGAHVFRDANPAATSPACRYCGQRFRSRNIIAHIRKA
TQGEIRLENCHPFRGRLWGRDWLFAHNGNLEGFRPPLAGRQPQGTTDSEHAFHYLLEQLTLRFGDIPPALADLRDALHTL
SERIARHGTFNYLLSCGERMFAHCSTDLHYVVRAYPFRSARLLDCDRAIDFARHNHLDDRMAVVTTRPLTADEDWHRLPA
GSLTLFADGQRQDDCVRRREVQLAV

Sequences:

>Translated_265_residues
MCQLLGMNCNKPATLQFSLEGFVQRGGGTDEHRDGWGIGYFDGDGAHVFRDANPAATSPACRYCGQRFRSRNIIAHIRKA
TQGEIRLENCHPFRGRLWGRDWLFAHNGNLEGFRPPLAGRQPQGTTDSEHAFHYLLEQLTLRFGDIPPALADLRDALHTL
SERIARHGTFNYLLSCGERMFAHCSTDLHYVVRAYPFRSARLLDCDRAIDFARHNHLDDRMAVVTTRPLTADEDWHRLPA
GSLTLFADGQRQDDCVRRREVQLAV
>Mature_265_residues
MCQLLGMNCNKPATLQFSLEGFVQRGGGTDEHRDGWGIGYFDGDGAHVFRDANPAATSPACRYCGQRFRSRNIIAHIRKA
TQGEIRLENCHPFRGRLWGRDWLFAHNGNLEGFRPPLAGRQPQGTTDSEHAFHYLLEQLTLRFGDIPPALADLRDALHTL
SERIARHGTFNYLLSCGERMFAHCSTDLHYVVRAYPFRSARLLDCDRAIDFARHNHLDDRMAVVTTRPLTADEDWHRLPA
GSLTLFADGQRQDDCVRRREVQLAV

Specific function: Unknown

COG id: COG0121

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786417, Length=253, Percent_Identity=43.4782608695652, Blast_Score=229, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005854
- InterPro:   IPR000583
- InterPro:   IPR017932 [H]

Pfam domain/function: PF00310 GATase_2 [H]

EC number: NA

Molecular weight: Translated: 30114; Mature: 30114

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQLLGMNCNKPATLQFSLEGFVQRGGGTDEHRDGWGIGYFDGDGAHVFRDANPAATSPA
CCEEECCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCHH
CRYCGQRFRSRNIIAHIRKATQGEIRLENCHPFRGRLWGRDWLFAHNGNLEGFRPPLAGR
HHHHHHHHHCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
QPQGTTDSEHAFHYLLEQLTLRFGDIPPALADLRDALHTLSERIARHGTFNYLLSCGERM
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FAHCSTDLHYVVRAYPFRSARLLDCDRAIDFARHNHLDDRMAVVTTRPLTADEDWHRLPA
HHHHCCCHHHHHHHCCCCCCEEECHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHCCC
GSLTLFADGQRQDDCVRRREVQLAV
CCEEEEECCCCCHHHHHHHHHEECC
>Mature Secondary Structure
MCQLLGMNCNKPATLQFSLEGFVQRGGGTDEHRDGWGIGYFDGDGAHVFRDANPAATSPA
CCEEECCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCHH
CRYCGQRFRSRNIIAHIRKATQGEIRLENCHPFRGRLWGRDWLFAHNGNLEGFRPPLAGR
HHHHHHHHHCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
QPQGTTDSEHAFHYLLEQLTLRFGDIPPALADLRDALHTLSERIARHGTFNYLLSCGERM
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FAHCSTDLHYVVRAYPFRSARLLDCDRAIDFARHNHLDDRMAVVTTRPLTADEDWHRLPA
HHHHCCCHHHHHHHCCCCCCEEECHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHCCC
GSLTLFADGQRQDDCVRRREVQLAV
CCEEEEECCCCCHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]