| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is dctQ3
Identifier: 119898577
GI number: 119898577
Start: 2506198
End: 2506716
Strand: Reverse
Name: dctQ3
Synonym: azo2286
Alternate gene names: NA
Gene position: 2506716-2506198 (Counterclockwise)
Preceding gene: 119898578
Following gene: 119898576
Centisome position: 57.28
GC content: 70.33
Gene sequence:
>519_bases ATGGCCGCTCAATCCGCGCCGGCAGCCGCCGGCGCCCCCGCAGGCAAACTCTACGACGGACTGATGCGCGCCTGTGGCGT CACCGCCGCGGCGCTGTTCGGTGGCATGGCGCTGCTGGTATGCGCCGATGTCTTCATGCGCAACGTCGGCCTCGGCACGC TGGCGTGGAGCGTGGAGGTGACCGAGTACATGCTGATGGTCGCCACCTTCGTCGCCGCCCCCTGGCTGCTCTACGCCGGT GACCACATCCGCGTCGACCTGATCGTGCGTGGCCTGCCGCCCGCGGCGCGCTGGCTATGCGAGGTCGTCACCGACCTTGC CGGGCTGGCGATCAGCGTCGTGCTGGGCTGGCAGTGCTGGACCATCACCCGCGACGCGGCCGAGCAGGGCAGCGTGGTGT TCAAGGTGCTGGTCTTCCCCGAATGGTGGCTCAAGCTGCCGATGGCTTTCGCCTGCGCGATGCTGGCGGTGGAGTTCGCC CGCCGCCTGCGCGCGGCCTTCGTGCGCGGAGGACGCTGA
Upstream 100 bases:
>100_bases AAGGTGAAATTTCCCGCCGAAACAAAAAACTAGCAAACGCGTGGACACGAAAATTTACCCCTGATATGTTTAATCATGAA TTAAACGCAGGGGTGATGAA
Downstream 100 bases:
>100_bases GATGGAATGGCAATCCGCGCTGGTATTGATGCTGGGCTGTCTGTTCGCGCTGATGCTGCTGGGGCTGCCGGTCGCCTTCG CCTTTCTCGGGGTGAATCTG
Product: putative TRAP-type C4-dicarboxylate transport system small permease
Products: NA
Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; TRAP-Type C4-Dicarboxylate Transport System Small Permease
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MAAQSAPAAAGAPAGKLYDGLMRACGVTAAALFGGMALLVCADVFMRNVGLGTLAWSVEVTEYMLMVATFVAAPWLLYAG DHIRVDLIVRGLPPAARWLCEVVTDLAGLAISVVLGWQCWTITRDAAEQGSVVFKVLVFPEWWLKLPMAFACAMLAVEFA RRLRAAFVRGGR
Sequences:
>Translated_172_residues MAAQSAPAAAGAPAGKLYDGLMRACGVTAAALFGGMALLVCADVFMRNVGLGTLAWSVEVTEYMLMVATFVAAPWLLYAG DHIRVDLIVRGLPPAARWLCEVVTDLAGLAISVVLGWQCWTITRDAAEQGSVVFKVLVFPEWWLKLPMAFACAMLAVEFA RRLRAAFVRGGR >Mature_171_residues AAQSAPAAAGAPAGKLYDGLMRACGVTAAALFGGMALLVCADVFMRNVGLGTLAWSVEVTEYMLMVATFVAAPWLLYAGD HIRVDLIVRGLPPAARWLCEVVTDLAGLAISVVLGWQCWTITRDAAEQGSVVFKVLVFPEWWLKLPMAFACAMLAVEFAR RLRAAFVRGGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18435; Mature: 18304
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAQSAPAAAGAPAGKLYDGLMRACGVTAAALFGGMALLVCADVFMRNVGLGTLAWSVEV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TEYMLMVATFVAAPWLLYAGDHIRVDLIVRGLPPAARWLCEVVTDLAGLAISVVLGWQCW HHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHE TITRDAAEQGSVVFKVLVFPEWWLKLPMAFACAMLAVEFARRLRAAFVRGGR EEEHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AAQSAPAAAGAPAGKLYDGLMRACGVTAAALFGGMALLVCADVFMRNVGLGTLAWSVEV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TEYMLMVATFVAAPWLLYAGDHIRVDLIVRGLPPAARWLCEVVTDLAGLAISVVLGWQCW HHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHE TITRDAAEQGSVVFKVLVFPEWWLKLPMAFACAMLAVEFARRLRAAFVRGGR EEEHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA