Click here to switch to the map view.

The map label for this gene is yvdE [H]

Identifier: 119898566

GI number: 119898566

Start: 2493040

End: 2493828

Strand: Reverse

Name: yvdE [H]

Synonym: azo2275

Alternate gene names: 119898566

Gene position: 2493828-2493040 (Counterclockwise)

Preceding gene: 119898567

Following gene: 119898565

Centisome position: 56.99

GC content: 67.05

Gene sequence:

>789_bases
GTGAGTGGGGGACCACTGCGGATAGGACTCTCGGCCCGGCTGCTGCACAAGCCGCCGCCCGAACTCGGCTTTCCCGGCAA
GAGCCTGCAGTATCTCGAGCAGTCGATGGCGCACTGGATCATGGCGCACGGTGCGCTTGCTTTCATGGTGCCCACCATCG
GCGAGCATCTCGGCCTGCGTCGCGCGCAGATTTCGGTGCACGATTACGTCGCGGCGCTGGACGGGCTGGTGCTGCAGGGC
GGCGCCGACGTCAGCCCCACCACTTACCACGAAACCCCGCTGCGCCCCGAATGGGCCGGCGACCGGGTGCGCGATCTGTA
CGAGATCGAGCTGCTGTGGGAATTCGTCATCCAGGGCAAGCCCGTGCTCGGCGTCTGCCGCGGCGCGCAACTCATCAACG
TGGCCTGCGGCGGCACGCTGTGGCAGGACATCACCGAATACGTGCCGGGCGCCGGCACGCACCGCAACGACGATCTCTAC
GACAGCCACTATCACGACATCGAACTCCAGCCCGGCAGCCGCCTCGCGGAGCTGTACGGCAAGGTGCCGGGCGGGCGGGT
GAACAGCATCCACCATCAGGCGGTCCGCAAGCTCGGGTCCGACCTGTGCATCGAAGCGCTGTCCGTCGGCGACGGCGTGA
TCGAGGCCATCCGCTGGAACGGCAGCAGCTACATGTTCGGCTGCCAGTGGCACCCCGAATTCCACGGCGACGGCGAGTTG
CTGGAGGGCGAGGTGATCCTGCGGGATTTTCTGGAGGCGGCGGCAGTCGCTCGCGACAAGAAGGTGTGA

Upstream 100 bases:

>100_bases
GCAATGACGCCTGGTGGTTGCGCGGGCAGCTGGGCCCGCAGGTAACGCTGCCGGAGGTGGTGATGGCGCAGTGCCGGCGC
TGGATGAACGGGGAGGGCAT

Downstream 100 bases:

>100_bases
GGGCACCTGCGGACGGCTCCATGTGGGGGCTTGTATAGCGCACGATTCCAAATTTGGTTCGCAGTTTTTGTTATTTCTCG
TTCTAAAGAGAGCCGTATGT

Product: putative glutamine amidotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSGGPLRIGLSARLLHKPPPELGFPGKSLQYLEQSMAHWIMAHGALAFMVPTIGEHLGLRRAQISVHDYVAALDGLVLQG
GADVSPTTYHETPLRPEWAGDRVRDLYEIELLWEFVIQGKPVLGVCRGAQLINVACGGTLWQDITEYVPGAGTHRNDDLY
DSHYHDIELQPGSRLAELYGKVPGGRVNSIHHQAVRKLGSDLCIEALSVGDGVIEAIRWNGSSYMFGCQWHPEFHGDGEL
LEGEVILRDFLEAAAVARDKKV

Sequences:

>Translated_262_residues
MSGGPLRIGLSARLLHKPPPELGFPGKSLQYLEQSMAHWIMAHGALAFMVPTIGEHLGLRRAQISVHDYVAALDGLVLQG
GADVSPTTYHETPLRPEWAGDRVRDLYEIELLWEFVIQGKPVLGVCRGAQLINVACGGTLWQDITEYVPGAGTHRNDDLY
DSHYHDIELQPGSRLAELYGKVPGGRVNSIHHQAVRKLGSDLCIEALSVGDGVIEAIRWNGSSYMFGCQWHPEFHGDGEL
LEGEVILRDFLEAAAVARDKKV
>Mature_261_residues
SGGPLRIGLSARLLHKPPPELGFPGKSLQYLEQSMAHWIMAHGALAFMVPTIGEHLGLRRAQISVHDYVAALDGLVLQGG
ADVSPTTYHETPLRPEWAGDRVRDLYEIELLWEFVIQGKPVLGVCRGAQLINVACGGTLWQDITEYVPGAGTHRNDDLYD
SHYHDIELQPGSRLAELYGKVPGGRVNSIHHQAVRKLGSDLCIEALSVGDGVIEAIRWNGSSYMFGCQWHPEFHGDGELL
EGEVILRDFLEAAAVARDKKV

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=235, Percent_Identity=27.2340425531915, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 28803; Mature: 28672

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGGPLRIGLSARLLHKPPPELGFPGKSLQYLEQSMAHWIMAHGALAFMVPTIGEHLGLR
CCCCCEEEECEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
RAQISVHDYVAALDGLVLQGGADVSPTTYHETPLRPEWAGDRVRDLYEIELLWEFVIQGK
HHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PVLGVCRGAQLINVACGGTLWQDITEYVPGAGTHRNDDLYDSHYHDIELQPGSRLAELYG
CCEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHC
KVPGGRVNSIHHQAVRKLGSDLCIEALSVGDGVIEAIRWNGSSYMFGCQWHPEFHGDGEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEHEEECCCCEEEEEEECCCCCCCCCE
LEGEVILRDFLEAAAVARDKKV
ECHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SGGPLRIGLSARLLHKPPPELGFPGKSLQYLEQSMAHWIMAHGALAFMVPTIGEHLGLR
CCCCEEEECEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
RAQISVHDYVAALDGLVLQGGADVSPTTYHETPLRPEWAGDRVRDLYEIELLWEFVIQGK
HHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PVLGVCRGAQLINVACGGTLWQDITEYVPGAGTHRNDDLYDSHYHDIELQPGSRLAELYG
CCEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHC
KVPGGRVNSIHHQAVRKLGSDLCIEALSVGDGVIEAIRWNGSSYMFGCQWHPEFHGDGEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEHEEECCCCEEEEEEECCCCCCCCCE
LEGEVILRDFLEAAAVARDKKV
ECHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]