| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
Click here to switch to the map view.
The map label for this gene is 119898547
Identifier: 119898547
GI number: 119898547
Start: 2474463
End: 2474945
Strand: Reverse
Name: 119898547
Synonym: azo2256
Alternate gene names: NA
Gene position: 2474945-2474463 (Counterclockwise)
Preceding gene: 119898548
Following gene: 119898546
Centisome position: 56.56
GC content: 73.08
Gene sequence:
>483_bases ATGAACGGGACGCGCGGGCGAGGGCAGGGCAGGGCAGGCGGACGCGGCGTCCCGGCGCTGCTGGCCTCCGCGCTGCTCTG CACCGCGCTGTCCGCCGCCGCCGGCAGCGACGATGCCGGCAAGGCGCGCTACCAGTTCATCCTCAACTGCGCCGGCTGCC ACCAGGCCGACGGCAGCGGCGCGCGGTCGGGCGGCGTGCCCACGCTGCGCGGCCAGATGGGCCATTTCCTGAAGACGCCG GAAGGGCGCGCCTTCCTGGTGCAGGTGCCGGGCACCTCCAACTCCGCGCTCTCCAACGCCGACATCGCCCGGATGCTCAA CTGGATGGCGGCGGCCTTCTCCGCGGCCACCCTGCCGCCCGATTTCCAGCCCTACACCGAGGCCGAGGTCAGCGCGCTGC GTGCCAACAAGCTCACCGATGTTTCCGGGGCGCGCCGCGCCATCGTCGCCCGCCTGGTCGCGGAGGGCATCCGCATCGAA TAA
Upstream 100 bases:
>100_bases CACAACGACATCAACTGGTGCATGGCCAACGACTCGACGATGTTCCACTGCACCATGGCCACCGTCGTCGGCCTGGCCGA GACCACGCGCTGAGGCAAGC
Downstream 100 bases:
>100_bases GCGCGCCGATTTCCTTCCCCAACGATTCCGTTTCCGCACTTTCTTCTCCGACGAGGACACCGACATGACCAAAACGACAA GTAAATCGCTCCGTCCGGCA
Product: cytochrome c-552
Products: NA
Alternate protein names: Class I Cytochrome C; Cytochrome C; Cytochrome C Family; Cytochrome C-
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MNGTRGRGQGRAGGRGVPALLASALLCTALSAAAGSDDAGKARYQFILNCAGCHQADGSGARSGGVPTLRGQMGHFLKTP EGRAFLVQVPGTSNSALSNADIARMLNWMAAAFSAATLPPDFQPYTEAEVSALRANKLTDVSGARRAIVARLVAEGIRIE
Sequences:
>Translated_160_residues MNGTRGRGQGRAGGRGVPALLASALLCTALSAAAGSDDAGKARYQFILNCAGCHQADGSGARSGGVPTLRGQMGHFLKTP EGRAFLVQVPGTSNSALSNADIARMLNWMAAAFSAATLPPDFQPYTEAEVSALRANKLTDVSGARRAIVARLVAEGIRIE >Mature_160_residues MNGTRGRGQGRAGGRGVPALLASALLCTALSAAAGSDDAGKARYQFILNCAGCHQADGSGARSGGVPTLRGQMGHFLKTP EGRAFLVQVPGTSNSALSNADIARMLNWMAAAFSAATLPPDFQPYTEAEVSALRANKLTDVSGARRAIVARLVAEGIRIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16441; Mature: 16441
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGTRGRGQGRAGGRGVPALLASALLCTALSAAAGSDDAGKARYQFILNCAGCHQADGSG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEECCCCCCCCCCC ARSGGVPTLRGQMGHFLKTPEGRAFLVQVPGTSNSALSNADIARMLNWMAAAFSAATLPP CCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC DFQPYTEAEVSALRANKLTDVSGARRAIVARLVAEGIRIE CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNGTRGRGQGRAGGRGVPALLASALLCTALSAAAGSDDAGKARYQFILNCAGCHQADGSG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEECCCCCCCCCCC ARSGGVPTLRGQMGHFLKTPEGRAFLVQVPGTSNSALSNADIARMLNWMAAAFSAATLPP CCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC DFQPYTEAEVSALRANKLTDVSGARRAIVARLVAEGIRIE CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA