| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is gumE
Identifier: 119898529
GI number: 119898529
Start: 2452857
End: 2454176
Strand: Reverse
Name: gumE
Synonym: azo2238
Alternate gene names: NA
Gene position: 2454176-2452857 (Counterclockwise)
Preceding gene: 119898530
Following gene: 119898528
Centisome position: 56.08
GC content: 68.41
Gene sequence:
>1320_bases ATGGCTGCAGGCAGCGTCGGCGTCGGGCTCCGTCCCGCCCTTGCATCACGCACCGAAAACCTTGACCTCTCCAGCGCGGA GCGGCGGCTGGTGGGGTGGGCGCTGCTGCTCGCGTGCTGCTATCCGCTGCTGCTCGTCGGCGTTCATACCAATGCACTGC GTCTCGGAGCTGCGGCGGTCGGCGTGGCGGAGGGGTTGATCCTTGGGTTGTGCCTGCCAGTACTGTTGCGGCGCGTTCCG AGCGCGATGGTCGGCGTGCTCGTGGTCGCCTTTGGGATGCTCGGCACGCTCTGGTTGCTACGTGGGGCGGTCGACTTCAA ATCGGCGCGCGATCTTGTGATTCCGGCGCTGTTCCTCTGGCTGGGCTGCGTGGTGGCGGACAGGGTGCTCGCCCAACGCG TGCTGTTCACCGTCGCAGGGGTGGCGCTGGCGGTGGCCCTGGTCGAACTCCTCTTCGTCGATACCTACTCGCGCTATTTC AACATCCTGTCGTACTACGTCGCTCAGGGCGCGGTGCCGGAGAGTTACCAGCAGGACGTCGCGTTGAACGTGAACGGCGT CCGCCCCGAGGGCATCGGGCGCACGCTGTTTCCCGCGCTGCTCGGCAGCCACCGGGTGTCGTCGATCTTCATCGAGCCGG TGTCGATGGGCAATTTCGCCACCTTGCTGGCGGCGTGGGGGCTGTCGCGCCCCTCCACCGAGCGCGGCACGATTGCGCTG GCGCTGTTGCTGGCGTGGGCGCTGATCGTGCTGGCCGATTCGCGCTACGGGCTCGTGGTGGTGACGCTGATGGCGGCGAT GCGGCTGACGCTGGTTCCGCGCTGGCAAGGCCTCGGGTTCGGTTTCCCGTTCATCGCGGTGACCGGCATCTGCGCGCTGG CGATCGCGTTTCCGCATCACCTGGCGGACGACTTCGTCGGCCGCCTCGCGCTCGGTGGGCGTTCGGTGCTCGAACTCGGC TGGGCCGGGCTGCTGGGGCTGGAAGGCTGGGCCGCCCGCCACGGCGACGCCGGCTACGCCTATCTGTTTACCCGCTTCGG CCTGCCGCTGGCGCTGGGGCTGTGGTGGTTCCTGTGGTTGTTGCCGATGCGTGACGAAGCGGCTGCGCGCCTGCGCGCCC AGGTCTCGCTCTACATCGCCTTGATCCTGACGGTGAGCGGCACGTCGCTGTTCGCCATGAAGACATCCGCGCTGCTGTGG TTTCTGATCGGCGTGAGCGTGGCCAGCCGCTTCGGCGGCACGACGGAGGACGCCAACGCGGGCGCGCCTCGGGCCGCCGC GCCGTCCTTGTCCGACCCAGTCACCGGGAGAAGTCCATGA
Upstream 100 bases:
>100_bases CTGGTGTGCAAGCCGCTTGGCTCCCTCCTCGAGGCGGGCCGGCAGCGCATGCTGCGGCCGCTCTCGCGGGCGACCCGAGC GTCTGTTGGAGCGGGCTGAC
Downstream 100 bases:
>100_bases AAGTCGTACATGTCGTCCGCCAGTTCCACCCCTCCATCGGCGGCATGGAAGAAGTGGTGCTCAACATCGCCCGCCATCAG GTCGAGGTGTGCGGCCAGCA
Product: putative surface polysaccharide polymerase
Products: NA
Alternate protein names: Surface Polysaccharide Polymerase
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MAAGSVGVGLRPALASRTENLDLSSAERRLVGWALLLACCYPLLLVGVHTNALRLGAAAVGVAEGLILGLCLPVLLRRVP SAMVGVLVVAFGMLGTLWLLRGAVDFKSARDLVIPALFLWLGCVVADRVLAQRVLFTVAGVALAVALVELLFVDTYSRYF NILSYYVAQGAVPESYQQDVALNVNGVRPEGIGRTLFPALLGSHRVSSIFIEPVSMGNFATLLAAWGLSRPSTERGTIAL ALLLAWALIVLADSRYGLVVVTLMAAMRLTLVPRWQGLGFGFPFIAVTGICALAIAFPHHLADDFVGRLALGGRSVLELG WAGLLGLEGWAARHGDAGYAYLFTRFGLPLALGLWWFLWLLPMRDEAAARLRAQVSLYIALILTVSGTSLFAMKTSALLW FLIGVSVASRFGGTTEDANAGAPRAAAPSLSDPVTGRSP
Sequences:
>Translated_439_residues MAAGSVGVGLRPALASRTENLDLSSAERRLVGWALLLACCYPLLLVGVHTNALRLGAAAVGVAEGLILGLCLPVLLRRVP SAMVGVLVVAFGMLGTLWLLRGAVDFKSARDLVIPALFLWLGCVVADRVLAQRVLFTVAGVALAVALVELLFVDTYSRYF NILSYYVAQGAVPESYQQDVALNVNGVRPEGIGRTLFPALLGSHRVSSIFIEPVSMGNFATLLAAWGLSRPSTERGTIAL ALLLAWALIVLADSRYGLVVVTLMAAMRLTLVPRWQGLGFGFPFIAVTGICALAIAFPHHLADDFVGRLALGGRSVLELG WAGLLGLEGWAARHGDAGYAYLFTRFGLPLALGLWWFLWLLPMRDEAAARLRAQVSLYIALILTVSGTSLFAMKTSALLW FLIGVSVASRFGGTTEDANAGAPRAAAPSLSDPVTGRSP >Mature_438_residues AAGSVGVGLRPALASRTENLDLSSAERRLVGWALLLACCYPLLLVGVHTNALRLGAAAVGVAEGLILGLCLPVLLRRVPS AMVGVLVVAFGMLGTLWLLRGAVDFKSARDLVIPALFLWLGCVVADRVLAQRVLFTVAGVALAVALVELLFVDTYSRYFN ILSYYVAQGAVPESYQQDVALNVNGVRPEGIGRTLFPALLGSHRVSSIFIEPVSMGNFATLLAAWGLSRPSTERGTIALA LLLAWALIVLADSRYGLVVVTLMAAMRLTLVPRWQGLGFGFPFIAVTGICALAIAFPHHLADDFVGRLALGGRSVLELGW AGLLGLEGWAARHGDAGYAYLFTRFGLPLALGLWWFLWLLPMRDEAAARLRAQVSLYIALILTVSGTSLFAMKTSALLWF LIGVSVASRFGGTTEDANAGAPRAAAPSLSDPVTGRSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46596; Mature: 46464
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGSVGVGLRPALASRTENLDLSSAERRLVGWALLLACCYPLLLVGVHTNALRLGAAAV CCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH GVAEGLILGLCLPVLLRRVPSAMVGVLVVAFGMLGTLWLLRGAVDFKSARDLVIPALFLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGCVVADRVLAQRVLFTVAGVALAVALVELLFVDTYSRYFNILSYYVAQGAVPESYQQDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCE ALNVNGVRPEGIGRTLFPALLGSHRVSSIFIEPVSMGNFATLLAAWGLSRPSTERGTIAL EEEECCCCCCCCCHHHHHHHHCCCHHHHEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHH ALLLAWALIVLADSRYGLVVVTLMAAMRLTLVPRWQGLGFGFPFIAVTGICALAIAFPHH HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LADDFVGRLALGGRSVLELGWAGLLGLEGWAARHGDAGYAYLFTRFGLPLALGLWWFLWL HHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHH LPMRDEAAARLRAQVSLYIALILTVSGTSLFAMKTSALLWFLIGVSVASRFGGTTEDANA HCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GAPRAAAPSLSDPVTGRSP CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AAGSVGVGLRPALASRTENLDLSSAERRLVGWALLLACCYPLLLVGVHTNALRLGAAAV CCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH GVAEGLILGLCLPVLLRRVPSAMVGVLVVAFGMLGTLWLLRGAVDFKSARDLVIPALFLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGCVVADRVLAQRVLFTVAGVALAVALVELLFVDTYSRYFNILSYYVAQGAVPESYQQDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCE ALNVNGVRPEGIGRTLFPALLGSHRVSSIFIEPVSMGNFATLLAAWGLSRPSTERGTIAL EEEECCCCCCCCCHHHHHHHHCCCHHHHEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHH ALLLAWALIVLADSRYGLVVVTLMAAMRLTLVPRWQGLGFGFPFIAVTGICALAIAFPHH HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LADDFVGRLALGGRSVLELGWAGLLGLEGWAARHGDAGYAYLFTRFGLPLALGLWWFLWL HHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHH LPMRDEAAARLRAQVSLYIALILTVSGTSLFAMKTSALLWFLIGVSVASRFGGTTEDANA HCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GAPRAAAPSLSDPVTGRSP CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA