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The map label for this gene is ywhC [H]

Identifier: 119898404

GI number: 119898404

Start: 2320366

End: 2321025

Strand: Reverse

Name: ywhC [H]

Synonym: azo2113

Alternate gene names: 119898404

Gene position: 2321025-2320366 (Counterclockwise)

Preceding gene: 119898405

Following gene: 119898403

Centisome position: 53.04

GC content: 66.52

Gene sequence:

>660_bases
ATGGATTCGCTGATCCCCACGCTTGCCATCTGGGCGTTGCCCGTGCTGCTTGCCATCACGCTGCACGAAGCTGCGCACGG
CTATGTCGCGCGCTATTTCGGCGATCCGACGGCGCACCTGGCCGGGCGCATCACGCTCAATCCGCTCAAGCACATCGACC
CGGTCGGCACGGTACTGGTGCCGATCGCGATTCTTGCGGCGAGCACGTTCCTGGCGGGGGGCGGCATTCTGTTCGGTTGG
GCCAAACCCGTACCCGTCGATTTCGGCCGTCTGCGCCGCCCCAAGGCGGACATGCTGTGGGTGGCCGCAGCAGGGCCTTT
TGTGAACCTGCTGATGGCGTTGGGGTGGGCCGTGTTGTTCAAGCTCGCGGCGGGCATGCCGCACGGCACGTACACGGTGC
CGATGATGAAGATGGCGGACGCGGGCATGCAGATCAATACCGTGCTGATGGTGCTCAACCTGCTGCCGATCCCGCCGCTC
GATGGCGGGCGCATTGCCGTCAGCCTGCTGCCTGGCCGGCTCGCCTGGTCGTACGCGCGGCTCGAGCCCTTCGGCTTCCC
GATCCTGCTGTTGCTGCTGGCGACCGGGCTGCTGGGCACGGTGCTGTGGCCCTTTGTCGCGGGCTTCCGTTTCTTGCTCG
CGTCGCTGATCGGGCTCTGA

Upstream 100 bases:

>100_bases
CTGGTGCGCGCTGGCCGCGGCGAGCTTGCACCGCTTGGCCTGGAGGCGCCCTGATTGGACGCCCTCTGCTAGAATCGCGC
GCTTTCCTACGCGCCCACCC

Downstream 100 bases:

>100_bases
GCCGGCATCGTCCGACTGCGTAACCATGAATCTGCCTCTCGACCTCGCGCCGGTAGAACAGCTCGGCGATATCGAAGCCG
TCGCTCGCCTGTACGGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MDSLIPTLAIWALPVLLAITLHEAAHGYVARYFGDPTAHLAGRITLNPLKHIDPVGTVLVPIAILAASTFLAGGGILFGW
AKPVPVDFGRLRRPKADMLWVAAAGPFVNLLMALGWAVLFKLAAGMPHGTYTVPMMKMADAGMQINTVLMVLNLLPIPPL
DGGRIAVSLLPGRLAWSYARLEPFGFPILLLLLATGLLGTVLWPFVAGFRFLLASLIGL

Sequences:

>Translated_219_residues
MDSLIPTLAIWALPVLLAITLHEAAHGYVARYFGDPTAHLAGRITLNPLKHIDPVGTVLVPIAILAASTFLAGGGILFGW
AKPVPVDFGRLRRPKADMLWVAAAGPFVNLLMALGWAVLFKLAAGMPHGTYTVPMMKMADAGMQINTVLMVLNLLPIPPL
DGGRIAVSLLPGRLAWSYARLEPFGFPILLLLLATGLLGTVLWPFVAGFRFLLASLIGL
>Mature_219_residues
MDSLIPTLAIWALPVLLAITLHEAAHGYVARYFGDPTAHLAGRITLNPLKHIDPVGTVLVPIAILAASTFLAGGGILFGW
AKPVPVDFGRLRRPKADMLWVAAAGPFVNLLMALGWAVLFKLAAGMPHGTYTVPMMKMADAGMQINTVLMVLNLLPIPPL
DGGRIAVSLLPGRLAWSYARLEPFGFPILLLLLATGLLGTVLWPFVAGFRFLLASLIGL

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 23375; Mature: 23375

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLIPTLAIWALPVLLAITLHEAAHGYVARYFGDPTAHLAGRITLNPLKHIDPVGTVLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEECHHHHCCHHHHHHH
PIAILAASTFLAGGGILFGWAKPVPVDFGRLRRPKADMLWVAAAGPFVNLLMALGWAVLF
HHHHHHHHHHHCCCCEEEECCCCCCCCHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHH
KLAAGMPHGTYTVPMMKMADAGMQINTVLMVLNLLPIPPLDGGRIAVSLLPGRLAWSYAR
HHHHCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHH
LEPFGFPILLLLLATGLLGTVLWPFVAGFRFLLASLIGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDSLIPTLAIWALPVLLAITLHEAAHGYVARYFGDPTAHLAGRITLNPLKHIDPVGTVLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEECHHHHCCHHHHHHH
PIAILAASTFLAGGGILFGWAKPVPVDFGRLRRPKADMLWVAAAGPFVNLLMALGWAVLF
HHHHHHHHHHHCCCCEEEECCCCCCCCHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHH
KLAAGMPHGTYTVPMMKMADAGMQINTVLMVLNLLPIPPLDGGRIAVSLLPGRLAWSYAR
HHHHCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHH
LEPFGFPILLLLLATGLLGTVLWPFVAGFRFLLASLIGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]