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The map label for this gene is scpB [H]

Identifier: 119898402

GI number: 119898402

Start: 2318924

End: 2319532

Strand: Reverse

Name: scpB [H]

Synonym: azo2111

Alternate gene names: 119898402

Gene position: 2319532-2318924 (Counterclockwise)

Preceding gene: 119898403

Following gene: 119898401

Centisome position: 53.01

GC content: 66.34

Gene sequence:

>609_bases
ATGGAACCTGCGTCGACGCCTGAGCGGTACAAGCGCATCATCGAGGCAGCCTTGCTCGCGGCGACTGCGCCGCTGCCGGT
TGGCACCCTGCGTCGCCTGTTCGATGAGGACCCGGGGCCGGATGTCGTACGCCGCCTGGTGGAGGAGTTGCGCGCCGACT
GGTCCGCCGCCGATCGTGGTGTCGAACTGGTGCTGCTCGCCAGCGGCTGGCGCTTCCAGACCCGGCCGGACTGCCAGCCT
TACCTCGACCGGCTGAAGGATGAAAGGCCGCCCCGGTATTCCAGGGCGGTGATGGAAACGCTCGCGATCATCGCCTACCG
TCAACCCGTCACCCGGGGTGACATCGAAGATATTCGCGGCGTGGCGGTTTCCGCCAACGTATTGAAAACACTGGAAGCTC
GCGGCTGGGTCGATATCGTCGGCCATCGCGACACCCCGGGTCGGCCGGCATTGTTCGCGACCACCCGCCGCTTCCTGGAC
GACATGGGCCTGCGCAGCCTCACCGAGCTGCCTGCGCTGGCCGAAATCGAAAGGATCATGGACCTTGTCGACACCTCGCA
AATCGAATCGCCCGCTGCGCCCGCCCCAGAAGAAGAGCCGGGGGCCTGA

Upstream 100 bases:

>100_bases
CTGGTGGTGTCGTTCCTGGCCGTGCTCGAGCTGGTCAAGGAGAAACTGGTCGAAGTGACGCAGAACGAGGCCTTCGCGCC
TATTTACGTGAAGCTGGCAG

Downstream 100 bases:

>100_bases
GGGCGCCGCCGACACGCGCCGGGCCGGTGCGCCCGCCGCCGTACGCGGCGAACCGCGCCGGCGCGCGCCAGAGCAGGTCA
GCGATGATCCGCAACGACGC

Product: putative segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MEPASTPERYKRIIEAALLAATAPLPVGTLRRLFDEDPGPDVVRRLVEELRADWSAADRGVELVLLASGWRFQTRPDCQP
YLDRLKDERPPRYSRAVMETLAIIAYRQPVTRGDIEDIRGVAVSANVLKTLEARGWVDIVGHRDTPGRPALFATTRRFLD
DMGLRSLTELPALAEIERIMDLVDTSQIESPAAPAPEEEPGA

Sequences:

>Translated_202_residues
MEPASTPERYKRIIEAALLAATAPLPVGTLRRLFDEDPGPDVVRRLVEELRADWSAADRGVELVLLASGWRFQTRPDCQP
YLDRLKDERPPRYSRAVMETLAIIAYRQPVTRGDIEDIRGVAVSANVLKTLEARGWVDIVGHRDTPGRPALFATTRRFLD
DMGLRSLTELPALAEIERIMDLVDTSQIESPAAPAPEEEPGA
>Mature_202_residues
MEPASTPERYKRIIEAALLAATAPLPVGTLRRLFDEDPGPDVVRRLVEELRADWSAADRGVELVLLASGWRFQTRPDCQP
YLDRLKDERPPRYSRAVMETLAIIAYRQPVTRGDIEDIRGVAVSANVLKTLEARGWVDIVGHRDTPGRPALFATTRRFLD
DMGLRSLTELPALAEIERIMDLVDTSQIESPAAPAPEEEPGA

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 22509; Mature: 22509

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPASTPERYKRIIEAALLAATAPLPVGTLRRLFDEDPGPDVVRRLVEELRADWSAADRG
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
VELVLLASGWRFQTRPDCQPYLDRLKDERPPRYSRAVMETLAIIAYRQPVTRGDIEDIRG
EEEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
VAVSANVLKTLEARGWVDIVGHRDTPGRPALFATTRRFLDDMGLRSLTELPALAEIERIM
HHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
DLVDTSQIESPAAPAPEEEPGA
HHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEPASTPERYKRIIEAALLAATAPLPVGTLRRLFDEDPGPDVVRRLVEELRADWSAADRG
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
VELVLLASGWRFQTRPDCQPYLDRLKDERPPRYSRAVMETLAIIAYRQPVTRGDIEDIRG
EEEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
VAVSANVLKTLEARGWVDIVGHRDTPGRPALFATTRRFLDDMGLRSLTELPALAEIERIM
HHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
DLVDTSQIESPAAPAPEEEPGA
HHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]