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The map label for this gene is rpfG [H]

Identifier: 119898368

GI number: 119898368

Start: 2282131

End: 2283384

Strand: Direct

Name: rpfG [H]

Synonym: azo2077

Alternate gene names: 119898368

Gene position: 2282131-2283384 (Clockwise)

Preceding gene: 119898367

Following gene: 119898369

Centisome position: 52.15

GC content: 67.3

Gene sequence:

>1254_bases
ATGCAGAAACTCAGCGTCGATCGTCTTCGCCCCGGCCTCTACGTATCGCTCGCATCGGTGGGCTGGATGCGCCATCCCTT
TCTGCTCAACGAGTTCCGCATCTCCTCGGAAAAGCAACTCGCTGCGCTGCGCGAACTTGGAATTGCAACGATCGACTGGG
ACCCTGCCCGCAGCACCGCCGAGCCGCTGCCAGAGACACAACCGGCCGGCGGCAGCGAGGACGATACGGTCGATTTTGGC
GCTGCAGCGCTCGATGCCATGCTGGACGAAAAGCGCGCGCGACTGGAGCACCTGCGTCAACGCCGCGAGGGCCTTGCCCG
CCGTGAGCGCCAGTTCGAACAGGAGGCTGCGGCTGCGGCCGAGATACTGAAGGGCTTTCCCGCCCGCGCCAACGAAGCGC
ACGCGCGGTGCAAGGCCCTGGTGGCCGATGTCGTCGCCGGCCTCGTCGGCACCGAGTCGATGGTGGTCCATCTGGTCAAC
CAGAAGGCGCGCGATCCTGGCCCCTCCGCCCACGCGCTCAATGTGATGGTGTTGTCGCTGCTGCTTGGCCGCGCCGCGCG
CCTGCTGGAGGACGAACTGCGTCTGCTCGGCGTGGGCGCCCTGCTCCACGACCTCGGCAAGGCCGAGCTGCCGCCACGCA
TCGTCCGCGCGGCCGAGCGCACGCCCCCGGAGGAAACGTACTACCGCGCGCACATCGGCTACGGCATCAAGGCGCTCGCC
GCGGTGCGCGAACTGCCGGTGGCGGTACGCAACATCGTCGCCTGCCATCACGAGCACAGCGACGGCAGCGGCTTTCCGAA
CGCGCTGGCCGGCGAAAAAATCCCGCGGCTTGCCCGCATCGTCGCCATCGCCAACCGCTACGACAACCTCTGCAATCCGT
TCGACCTGACCACTGCAAAGACGCCGTCGGTGGCGCTGCGCCAGCTGTTTGCGGCCGAGGGCAAGCACTTCGACGGCACG
CTGTTGCAGCTCTTCGTCAAGACGCTCGGGGTGTTTCCACCCGGCTCCTTTGTCCAGCTGTCCAACGGGGCGACGGGCCT
GGTCATCGAGACCCACGAAGACGATCTGCTGCATCCGCTGGTCATGCTGTATGACCGCGACGTGCCCCGCAGCGAGGCCA
TGCTGCTCGACCTCAAGGAGGTCGAACTCAAGGTGGAGAGCGCGCTCAGCCCCGCGCGCCTGCCGCTGGAGGTCGTCGAA
TACCTCGCCCCGCGCGGCCGCGTGGATTACTACGTCGAAGGCGCCGGCGGCTGA

Upstream 100 bases:

>100_bases
GGGGTGCCGCCGGCCTTTCCTGAAATCCCTTCACTATTCCTTTGGTAGCGTCGCCGCAGCATACAATGGCGCGCCCCGCG
TTGCCCCGTCCGCCCACGCC

Downstream 100 bases:

>100_bases
CCCCCCGCGCCCTCCCCCTACGCCCCTCTACCCGGCCTCGATGAGTTCCTCCCGACATTTGCTCCGCGCCGTCGCCATGC
TGCTGGGCGCGCTGTTCTTC

Product: HD-domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MQKLSVDRLRPGLYVSLASVGWMRHPFLLNEFRISSEKQLAALRELGIATIDWDPARSTAEPLPETQPAGGSEDDTVDFG
AAALDAMLDEKRARLEHLRQRREGLARRERQFEQEAAAAAEILKGFPARANEAHARCKALVADVVAGLVGTESMVVHLVN
QKARDPGPSAHALNVMVLSLLLGRAARLLEDELRLLGVGALLHDLGKAELPPRIVRAAERTPPEETYYRAHIGYGIKALA
AVRELPVAVRNIVACHHEHSDGSGFPNALAGEKIPRLARIVAIANRYDNLCNPFDLTTAKTPSVALRQLFAAEGKHFDGT
LLQLFVKTLGVFPPGSFVQLSNGATGLVIETHEDDLLHPLVMLYDRDVPRSEAMLLDLKEVELKVESALSPARLPLEVVE
YLAPRGRVDYYVEGAGG

Sequences:

>Translated_417_residues
MQKLSVDRLRPGLYVSLASVGWMRHPFLLNEFRISSEKQLAALRELGIATIDWDPARSTAEPLPETQPAGGSEDDTVDFG
AAALDAMLDEKRARLEHLRQRREGLARRERQFEQEAAAAAEILKGFPARANEAHARCKALVADVVAGLVGTESMVVHLVN
QKARDPGPSAHALNVMVLSLLLGRAARLLEDELRLLGVGALLHDLGKAELPPRIVRAAERTPPEETYYRAHIGYGIKALA
AVRELPVAVRNIVACHHEHSDGSGFPNALAGEKIPRLARIVAIANRYDNLCNPFDLTTAKTPSVALRQLFAAEGKHFDGT
LLQLFVKTLGVFPPGSFVQLSNGATGLVIETHEDDLLHPLVMLYDRDVPRSEAMLLDLKEVELKVESALSPARLPLEVVE
YLAPRGRVDYYVEGAGG
>Mature_417_residues
MQKLSVDRLRPGLYVSLASVGWMRHPFLLNEFRISSEKQLAALRELGIATIDWDPARSTAEPLPETQPAGGSEDDTVDFG
AAALDAMLDEKRARLEHLRQRREGLARRERQFEQEAAAAAEILKGFPARANEAHARCKALVADVVAGLVGTESMVVHLVN
QKARDPGPSAHALNVMVLSLLLGRAARLLEDELRLLGVGALLHDLGKAELPPRIVRAAERTPPEETYYRAHIGYGIKALA
AVRELPVAVRNIVACHHEHSDGSGFPNALAGEKIPRLARIVAIANRYDNLCNPFDLTTAKTPSVALRQLFAAEGKHFDGT
LLQLFVKTLGVFPPGSFVQLSNGATGLVIETHEDDLLHPLVMLYDRDVPRSEAMLLDLKEVELKVESALSPARLPLEVVE
YLAPRGRVDYYVEGAGG

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 45579; Mature: 45579

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLSVDRLRPGLYVSLASVGWMRHPFLLNEFRISSEKQLAALRELGIATIDWDPARSTA
CCCCCHHHCCCCCEEEHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCEEECCCCCCCCC
EPLPETQPAGGSEDDTVDFGAAALDAMLDEKRARLEHLRQRREGLARRERQFEQEAAAAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EILKGFPARANEAHARCKALVADVVAGLVGTESMVVHLVNQKARDPGPSAHALNVMVLSL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LLGRAARLLEDELRLLGVGALLHDLGKAELPPRIVRAAERTPPEETYYRAHIGYGIKALA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHEEHHHCCCHHHHH
AVRELPVAVRNIVACHHEHSDGSGFPNALAGEKIPRLARIVAIANRYDNLCNPFDLTTAK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TPSVALRQLFAAEGKHFDGTLLQLFVKTLGVFPPGSFVQLSNGATGLVIETHEDDLLHPL
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCHHHHHH
VMLYDRDVPRSEAMLLDLKEVELKVESALSPARLPLEVVEYLAPRGRVDYYVEGAGG
HHHHCCCCCCCHHHEEEHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEEECCCC
>Mature Secondary Structure
MQKLSVDRLRPGLYVSLASVGWMRHPFLLNEFRISSEKQLAALRELGIATIDWDPARSTA
CCCCCHHHCCCCCEEEHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCEEECCCCCCCCC
EPLPETQPAGGSEDDTVDFGAAALDAMLDEKRARLEHLRQRREGLARRERQFEQEAAAAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EILKGFPARANEAHARCKALVADVVAGLVGTESMVVHLVNQKARDPGPSAHALNVMVLSL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LLGRAARLLEDELRLLGVGALLHDLGKAELPPRIVRAAERTPPEETYYRAHIGYGIKALA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHEEHHHCCCHHHHH
AVRELPVAVRNIVACHHEHSDGSGFPNALAGEKIPRLARIVAIANRYDNLCNPFDLTTAK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TPSVALRQLFAAEGKHFDGTLLQLFVKTLGVFPPGSFVQLSNGATGLVIETHEDDLLHPL
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCHHHHHH
VMLYDRDVPRSEAMLLDLKEVELKVESALSPARLPLEVVEYLAPRGRVDYYVEGAGG
HHHHCCCCCCCHHHEEEHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]