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The map label for this gene is ycgB [H]

Identifier: 119898366

GI number: 119898366

Start: 2278947

End: 2280482

Strand: Direct

Name: ycgB [H]

Synonym: azo2075

Alternate gene names: 119898366

Gene position: 2278947-2280482 (Clockwise)

Preceding gene: 119898365

Following gene: 119898367

Centisome position: 52.08

GC content: 61.0

Gene sequence:

>1536_bases
ATGAAGCGACACGCCACGAAGATGACGCCGCTGCCGAGCGGGTCCGAATGGTCCTTCGATGCCATCGAGCGCTACCACAC
CGAGATCGCCCGGGTCGCCTCGAACTACCGGCTCGATACCTATCCTGTACAGATCGAGATCATCACCGCCGAGCAGATGA
TGGACGCCTACGCCTCGGTGGGCATGCCGGTGAACTACCACCACTGGTCGTTCGGCAAGCACTTCCTCGCCACCGAGAAA
GGCTACCGGCGCGGACAGATGGGACTGGCGTACGAAATCGTCATCAATTCCAATCCCTGCATCGCCTACCTGATGGAGGA
GAACACGCTGCCAATGCAGGGCCTGGTGATTGCGCACGCTGCCTATGGCCACAACAGCTTCTTCAAGGGCAACTACATGT
TCCGCACCTGGACCAATGCGGACGCGATCATCGATTACCTCGTCTTCGCCCGGAACTACATCGCCAGCTGCGAAGAGCGC
TACGGCGAGGAAGAAGTCGAACTGCTGCTCGATTCTTGCCACGCGCTGATGAACCTCGGCGTGGACCGCTACAAGCGCCC
GCCCAAACTATCGCTTGCAAAGGAAAAGCTGCGCCAGGCCGAGCGCGAGGAATACCTGCAGGGCCAGGTGAACGACCTGT
GGCGCACCCTCCCCCAGATGGAAGCCCGCACCGGCGCGGTGGCAGAACGGCGCTTTCCGGACGAGCCGGAGGAAAACCTG
CTCTACTTCATCGAAAAAAACGCGCCGCTGCTCGAACCCTGGCAACGCGAGGTGGTACGCATCGTGCGCAAGATCGCGCA
GTACTTCTTCCCGCAGCGGCAGACCCAGGTGATGAACGAGGGCTGGGCGACGTTCTGGCACTACACGCTGCTCAATACCT
TGTACGACGAAGGATTGCTGGCTGACAGCTTCATGCTGGAGTTCCTGCAATCGCACACCAACGTGGTTTACCAGCCGCCG
TACAACAGCCGCTGGTACAGCGGGATCAACCCCTACGCGCTCGGCTTTGCCATGTGGCAGGACATCCGGCGCATGTGCGA
AAACCCCACCGAGGAAGACCGTCGCTGGTTTCCGGACATTGCCGGCAGCGACTGGCGCGACACCTTCGAATTCGCGATGC
GCAATTTCAAGGACGAAAGTTTCATCGCCCAATACCTGTCGCCCAAGGTCATGCGCGACTTCCACATGTTCGCCATCCTA
GATGACGACCACCAGGACAAGCTCAAGGTCTCCGCCATCCATGATGACGCGGGCTTTCGGCGCGTGCGCGAAGTGCTGTC
GGACCAGTACAACCTTGGCAGCCGCGAGCCCAACATCCAGGTCTGGAATGTCGATTTGCGCGGTGACCGCTCGCTGACCC
TGCGGCACCAGGAGTACCGCCGCCGCATGCTGGGTACCACCACCGAGGAGGTCATCAAGCACGTCGCGCGACTGTGGGGC
TTCACCGTCCGGCTTGAAGCAGTGGACGAACACGGCGGCGTGGAATTGATTCACGAGGCCCGGCTGGAGAAGCGACGCGC
CAACGGACTCGCATGA

Upstream 100 bases:

>100_bases
AGAAGCTGCAGTCCGCTCACGTCAACTTCGCGATGCAGCGCATCGAGAAGGCGGCCGACATCTACCCGGTGTTCCGGGAA
CTCTTCAAGAAGACACTCGC

Downstream 100 bases:

>100_bases
GCAGGCTGTAGAATCGGCCGCCTTGCCTCCCGGAGTCCATCATGTTCGCGCCCGCCCAGCCCATCTGTCCTGTCGCCGGC
ATCCGTGCGATCGAAAAGAC

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MKRHATKMTPLPSGSEWSFDAIERYHTEIARVASNYRLDTYPVQIEIITAEQMMDAYASVGMPVNYHHWSFGKHFLATEK
GYRRGQMGLAYEIVINSNPCIAYLMEENTLPMQGLVIAHAAYGHNSFFKGNYMFRTWTNADAIIDYLVFARNYIASCEER
YGEEEVELLLDSCHALMNLGVDRYKRPPKLSLAKEKLRQAEREEYLQGQVNDLWRTLPQMEARTGAVAERRFPDEPEENL
LYFIEKNAPLLEPWQREVVRIVRKIAQYFFPQRQTQVMNEGWATFWHYTLLNTLYDEGLLADSFMLEFLQSHTNVVYQPP
YNSRWYSGINPYALGFAMWQDIRRMCENPTEEDRRWFPDIAGSDWRDTFEFAMRNFKDESFIAQYLSPKVMRDFHMFAIL
DDDHQDKLKVSAIHDDAGFRRVREVLSDQYNLGSREPNIQVWNVDLRGDRSLTLRHQEYRRRMLGTTTEEVIKHVARLWG
FTVRLEAVDEHGGVELIHEARLEKRRANGLA

Sequences:

>Translated_511_residues
MKRHATKMTPLPSGSEWSFDAIERYHTEIARVASNYRLDTYPVQIEIITAEQMMDAYASVGMPVNYHHWSFGKHFLATEK
GYRRGQMGLAYEIVINSNPCIAYLMEENTLPMQGLVIAHAAYGHNSFFKGNYMFRTWTNADAIIDYLVFARNYIASCEER
YGEEEVELLLDSCHALMNLGVDRYKRPPKLSLAKEKLRQAEREEYLQGQVNDLWRTLPQMEARTGAVAERRFPDEPEENL
LYFIEKNAPLLEPWQREVVRIVRKIAQYFFPQRQTQVMNEGWATFWHYTLLNTLYDEGLLADSFMLEFLQSHTNVVYQPP
YNSRWYSGINPYALGFAMWQDIRRMCENPTEEDRRWFPDIAGSDWRDTFEFAMRNFKDESFIAQYLSPKVMRDFHMFAIL
DDDHQDKLKVSAIHDDAGFRRVREVLSDQYNLGSREPNIQVWNVDLRGDRSLTLRHQEYRRRMLGTTTEEVIKHVARLWG
FTVRLEAVDEHGGVELIHEARLEKRRANGLA
>Mature_511_residues
MKRHATKMTPLPSGSEWSFDAIERYHTEIARVASNYRLDTYPVQIEIITAEQMMDAYASVGMPVNYHHWSFGKHFLATEK
GYRRGQMGLAYEIVINSNPCIAYLMEENTLPMQGLVIAHAAYGHNSFFKGNYMFRTWTNADAIIDYLVFARNYIASCEER
YGEEEVELLLDSCHALMNLGVDRYKRPPKLSLAKEKLRQAEREEYLQGQVNDLWRTLPQMEARTGAVAERRFPDEPEENL
LYFIEKNAPLLEPWQREVVRIVRKIAQYFFPQRQTQVMNEGWATFWHYTLLNTLYDEGLLADSFMLEFLQSHTNVVYQPP
YNSRWYSGINPYALGFAMWQDIRRMCENPTEEDRRWFPDIAGSDWRDTFEFAMRNFKDESFIAQYLSPKVMRDFHMFAIL
DDDHQDKLKVSAIHDDAGFRRVREVLSDQYNLGSREPNIQVWNVDLRGDRSLTLRHQEYRRRMLGTTTEEVIKHVARLWG
FTVRLEAVDEHGGVELIHEARLEKRRANGLA

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=489, Percent_Identity=69.5296523517382, Blast_Score=741, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 60155; Mature: 60155

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRHATKMTPLPSGSEWSFDAIERYHTEIARVASNYRLDTYPVQIEIITAEQMMDAYASV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEHHHHHHHHHHC
GMPVNYHHWSFGKHFLATEKGYRRGQMGLAYEIVINSNPCIAYLMEENTLPMQGLVIAHA
CCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHEEEEE
AYGHNSFFKGNYMFRTWTNADAIIDYLVFARNYIASCEERYGEEEVELLLDSCHALMNLG
ECCCCCEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
VDRYKRPPKLSLAKEKLRQAEREEYLQGQVNDLWRTLPQMEARTGAVAERRFPDEPEENL
HHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCE
LYFIEKNAPLLEPWQREVVRIVRKIAQYFFPQRQTQVMNEGWATFWHYTLLNTLYDEGLL
EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCH
ADSFMLEFLQSHTNVVYQPPYNSRWYSGINPYALGFAMWQDIRRMCENPTEEDRRWFPDI
HHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC
AGSDWRDTFEFAMRNFKDESFIAQYLSPKVMRDFHMFAILDDDHQDKLKVSAIHDDAGFR
CCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHEEEEEEECCCCCCCEEEEEEECCHHHH
RVREVLSDQYNLGSREPNIQVWNVDLRGDRSLTLRHQEYRRRMLGTTTEEVIKHVARLWG
HHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEECHHHHHHHHCCCCHHHHHHHHHHHHC
FTVRLEAVDEHGGVELIHEARLEKRRANGLA
EEEEEEEECCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRHATKMTPLPSGSEWSFDAIERYHTEIARVASNYRLDTYPVQIEIITAEQMMDAYASV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEHHHHHHHHHHC
GMPVNYHHWSFGKHFLATEKGYRRGQMGLAYEIVINSNPCIAYLMEENTLPMQGLVIAHA
CCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHEEEEE
AYGHNSFFKGNYMFRTWTNADAIIDYLVFARNYIASCEERYGEEEVELLLDSCHALMNLG
ECCCCCEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
VDRYKRPPKLSLAKEKLRQAEREEYLQGQVNDLWRTLPQMEARTGAVAERRFPDEPEENL
HHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCE
LYFIEKNAPLLEPWQREVVRIVRKIAQYFFPQRQTQVMNEGWATFWHYTLLNTLYDEGLL
EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCH
ADSFMLEFLQSHTNVVYQPPYNSRWYSGINPYALGFAMWQDIRRMCENPTEEDRRWFPDI
HHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC
AGSDWRDTFEFAMRNFKDESFIAQYLSPKVMRDFHMFAILDDDHQDKLKVSAIHDDAGFR
CCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHEEEEEEECCCCCCCEEEEEEECCHHHH
RVREVLSDQYNLGSREPNIQVWNVDLRGDRSLTLRHQEYRRRMLGTTTEEVIKHVARLWG
HHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEECHHHHHHHHCCCCHHHHHHHHHHHHC
FTVRLEAVDEHGGVELIHEARLEKRRANGLA
EEEEEEEECCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]