Click here to switch to the map view.

The map label for this gene is ybfL [H]

Identifier: 119898341

GI number: 119898341

Start: 2249016

End: 2250140

Strand: Reverse

Name: ybfL [H]

Synonym: azo2050

Alternate gene names: 119898341

Gene position: 2250140-2249016 (Counterclockwise)

Preceding gene: 119898342

Following gene: 119898329

Centisome position: 51.42

GC content: 65.78

Gene sequence:

>1125_bases
ATGCAGACGAGGGAGGTGATGCCGCTCACGCAGGTGTTCGTCTCGATCTCCGACCCGCGCAGCGCCCGGCGGGTCCGGCA
CGATCTGTCCGAGTTGCTCACGGTAGCGGTGTGCGCGGTGCTGTGCAGCGCGGACGAGTTCTCCGACATCGAGGCGTGGG
CCAAGGAGCGCATCGACTGGCTGCGAGGCTTTCTGGTGCTTGAGCACGGCATCCCCTCGCACGACACGTTCGGTCGGGTG
TTCGCGGCGCTCAACCCGCGCGAGTTCGAAGCCGCCTTTCGGCGCTGGGTCGGGCAACTGGTGCCGGCCCTGGGCCCGGA
TGCGGTGGTGGCCATCGACGGCAAGACCAGCCGGCGCAGCACGACCAAGGCCGCGGCCAATCCCTTGCACCTGGTCAGCG
CCTTCGCCGCCGACGTCGGCCTGGTGCTCGGTCAGACGGCGACGGCCGAGAAGTCCAATGAGATCACGGCGATTCCCGAG
TTGCTGGCGACGCTGGCGTTGCAGGGCTGTGTCGTCACCATCGATGCGATGGGCACCCAGACCGGCATTGCGAAGGCGAT
TCGCGACGGCGGTGCCGACTACGTGCTGTGCGTGAAGGACAACCACCCGAAGCTCGTCGAATCGTTCCTGCTCGCCCAGG
CAGGTGTGGGGGGGCCACTGAGGCCCAGCTCCACGAGTGAAAGCTGCGAGGACGGTCATGGCCGAACGGAAGTGCGCCGT
TGCTGGGCGTTCGACGCGGTCGATCGGCTCTACAAGGCCGAACAGTGGCCGGATCTGAAGAGCTTCGCGATCGTCGAGTG
TGAGCGAACGGTCGGCACCAAGACCAGTTGTGAGCGCCGCTACTACATCAGCTCCCTGCCGGCGGAGGCGACCCGGATCG
CCCATGCGGTGCGTAGCCACTGGGAGGTCGAGAACCGGCTTCATTGGTGCCTCGACGTCCTGTTCAACGAGGACCAGTCC
ACCGTGCGCACCGGATTCGCGGCCAACAACCTCGCCATCGTTCGCCACATCGTGATGAACCTGCTTCGGCTGAACACTTC
GCGCAAGGGCAGCATCAAGACGAAGCGGATGCTCGCCGCCACCTCCGACACGTTCCGCGCTGAATTGCTCGGGTTCATGA
CATGA

Upstream 100 bases:

>100_bases
GACATAGCCACATGCAGAATCTCGTTCACCTTCATGTGCTTACGACACCCCTGTTCACAGTCCGCGAAATTGTGTAGTTT
CCTCGTCTTTTGGGGTTCCC

Downstream 100 bases:

>100_bases
AGGTGCGATTGCCCTGGTCACTGTAGTTGTCTGATCTGAGTTGCTGCTTATGGTGACCATCGATCATGCACGGGGCTGTG
TCGTTGCGCGACGGGCTTTC

Product: H repeat-containing protein

Products: NA

Alternate protein names: H repeat-associated protein in rhsC-phrB intergenic region; ORF-H2 [H]

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MQTREVMPLTQVFVSISDPRSARRVRHDLSELLTVAVCAVLCSADEFSDIEAWAKERIDWLRGFLVLEHGIPSHDTFGRV
FAALNPREFEAAFRRWVGQLVPALGPDAVVAIDGKTSRRSTTKAAANPLHLVSAFAADVGLVLGQTATAEKSNEITAIPE
LLATLALQGCVVTIDAMGTQTGIAKAIRDGGADYVLCVKDNHPKLVESFLLAQAGVGGPLRPSSTSESCEDGHGRTEVRR
CWAFDAVDRLYKAEQWPDLKSFAIVECERTVGTKTSCERRYYISSLPAEATRIAHAVRSHWEVENRLHWCLDVLFNEDQS
TVRTGFAANNLAIVRHIVMNLLRLNTSRKGSIKTKRMLAATSDTFRAELLGFMT

Sequences:

>Translated_374_residues
MQTREVMPLTQVFVSISDPRSARRVRHDLSELLTVAVCAVLCSADEFSDIEAWAKERIDWLRGFLVLEHGIPSHDTFGRV
FAALNPREFEAAFRRWVGQLVPALGPDAVVAIDGKTSRRSTTKAAANPLHLVSAFAADVGLVLGQTATAEKSNEITAIPE
LLATLALQGCVVTIDAMGTQTGIAKAIRDGGADYVLCVKDNHPKLVESFLLAQAGVGGPLRPSSTSESCEDGHGRTEVRR
CWAFDAVDRLYKAEQWPDLKSFAIVECERTVGTKTSCERRYYISSLPAEATRIAHAVRSHWEVENRLHWCLDVLFNEDQS
TVRTGFAANNLAIVRHIVMNLLRLNTSRKGSIKTKRMLAATSDTFRAELLGFMT
>Mature_374_residues
MQTREVMPLTQVFVSISDPRSARRVRHDLSELLTVAVCAVLCSADEFSDIEAWAKERIDWLRGFLVLEHGIPSHDTFGRV
FAALNPREFEAAFRRWVGQLVPALGPDAVVAIDGKTSRRSTTKAAANPLHLVSAFAADVGLVLGQTATAEKSNEITAIPE
LLATLALQGCVVTIDAMGTQTGIAKAIRDGGADYVLCVKDNHPKLVESFLLAQAGVGGPLRPSSTSESCEDGHGRTEVRR
CWAFDAVDRLYKAEQWPDLKSFAIVECERTVGTKTSCERRYYISSLPAEATRIAHAVRSHWEVENRLHWCLDVLFNEDQS
TVRTGFAANNLAIVRHIVMNLLRLNTSRKGSIKTKRMLAATSDTFRAELLGFMT

Specific function: Unknown

COG id: COG5433

COG function: function code L; Transposase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1787733, Length=378, Percent_Identity=36.7724867724868, Blast_Score=231, Evalue=8e-62,
Organism=Escherichia coli, GI1789896, Length=378, Percent_Identity=36.7724867724868, Blast_Score=231, Evalue=8e-62,
Organism=Escherichia coli, GI1786924, Length=249, Percent_Identity=37.3493975903614, Blast_Score=156, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 41193; Mature: 41193

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTREVMPLTQVFVSISDPRSARRVRHDLSELLTVAVCAVLCSADEFSDIEAWAKERIDW
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LRGFLVLEHGIPSHDTFGRVFAALNPREFEAAFRRWVGQLVPALGPDAVVAIDGKTSRRS
HHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
TTKAAANPLHLVSAFAADVGLVLGQTATAEKSNEITAIPELLATLALQGCVVTIDAMGTQ
HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCH
TGIAKAIRDGGADYVLCVKDNHPKLVESFLLAQAGVGGPLRPSSTSESCEDGHGRTEVRR
HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHHHH
CWAFDAVDRLYKAEQWPDLKSFAIVECERTVGTKTSCERRYYISSLPAEATRIAHAVRSH
HHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
WEVENRLHWCLDVLFNEDQSTVRTGFAANNLAIVRHIVMNLLRLNTSRKGSIKTKRMLAA
HHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
TSDTFRAELLGFMT
CCHHHHHHHHHHCC
>Mature Secondary Structure
MQTREVMPLTQVFVSISDPRSARRVRHDLSELLTVAVCAVLCSADEFSDIEAWAKERIDW
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LRGFLVLEHGIPSHDTFGRVFAALNPREFEAAFRRWVGQLVPALGPDAVVAIDGKTSRRS
HHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
TTKAAANPLHLVSAFAADVGLVLGQTATAEKSNEITAIPELLATLALQGCVVTIDAMGTQ
HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCH
TGIAKAIRDGGADYVLCVKDNHPKLVESFLLAQAGVGGPLRPSSTSESCEDGHGRTEVRR
HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHHHH
CWAFDAVDRLYKAEQWPDLKSFAIVECERTVGTKTSCERRYYISSLPAEATRIAHAVRSH
HHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
WEVENRLHWCLDVLFNEDQSTVRTGFAANNLAIVRHIVMNLLRLNTSRKGSIKTKRMLAA
HHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
TSDTFRAELLGFMT
CCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8387990; 8905232; 9278503 [H]