Click here to switch to the map view.

The map label for this gene is repA

Identifier: 119898331

GI number: 119898331

Start: 2238649

End: 2239074

Strand: Direct

Name: repA

Synonym: azo2040

Alternate gene names: NA

Gene position: 2238649-2239074 (Clockwise)

Preceding gene: 119898330

Following gene: 119898332

Centisome position: 51.16

GC content: 67.84

Gene sequence:

>426_bases
ATGCCGACAAGCAAGCCGACCCAACTCAAGCTGGATTACCGGTCCGGACAGCCGATTCCCGCCTGGGTGCGCGAAGTCAT
CGACGCCCACTTGGCGATCGAGACCGAGGACGCCAGAAGCGCCGGCGCTCTTGGCTTCATGGCGCGCGCCCTCGTCATCG
CGACGATGCCGTACAAGGACCCCAAGACGGACGTTTTCAAGCGCCAGAACGGCGACTTCCGCCTGCGGATCATCGCGGGC
TACGAAGGCGGCATTCCCTACGGCATCTATCCGCGCCTGCTGATGTCCTGGGTGTCGACCGAGGCGGTCCGCACCCGATC
GCCGGTGATCCAGCTCGGCGACTCCCTGCGCGCCTTCCTGCGCGACGTGATGGACCTGCGCAGCACCGGCGGCGGCGTCC
GCGGCAGCGGCACGCGCGTCGCCTAG

Upstream 100 bases:

>100_bases
GGCGCCGGGAGCAACCCCGCCGAGCCGTCCCCGCAGGAGCAACGCGAATGCCGCCATCCCGGTAACCGGGAAGCAATCAG
CAGGAGAAGCCGTCGCGGTC

Downstream 100 bases:

>100_bases
CAGGTCAAGCGGCTGTTCGGTTCGCTCATCACCGCACACTACACCGGCAACCAACAGCACCGGGGCTTCGTGCTCAAGAA
CGTGCTGATCGCCGAAGACC

Product: replicase protein RepA

Products: NA

Alternate protein names: RepA Replicase Protein; Replicase Protein RepA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MPTSKPTQLKLDYRSGQPIPAWVREVIDAHLAIETEDARSAGALGFMARALVIATMPYKDPKTDVFKRQNGDFRLRIIAG
YEGGIPYGIYPRLLMSWVSTEAVRTRSPVIQLGDSLRAFLRDVMDLRSTGGGVRGSGTRVA

Sequences:

>Translated_141_residues
MPTSKPTQLKLDYRSGQPIPAWVREVIDAHLAIETEDARSAGALGFMARALVIATMPYKDPKTDVFKRQNGDFRLRIIAG
YEGGIPYGIYPRLLMSWVSTEAVRTRSPVIQLGDSLRAFLRDVMDLRSTGGGVRGSGTRVA
>Mature_140_residues
PTSKPTQLKLDYRSGQPIPAWVREVIDAHLAIETEDARSAGALGFMARALVIATMPYKDPKTDVFKRQNGDFRLRIIAGY
EGGIPYGIYPRLLMSWVSTEAVRTRSPVIQLGDSLRAFLRDVMDLRSTGGGVRGSGTRVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15538; Mature: 15407

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSKPTQLKLDYRSGQPIPAWVREVIDAHLAIETEDARSAGALGFMARALVIATMPYKD
CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCCCC
PKTDVFKRQNGDFRLRIIAGYEGGIPYGIYPRLLMSWVSTEAVRTRSPVIQLGDSLRAFL
CCCHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RDVMDLRSTGGGVRGSGTRVA
HHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PTSKPTQLKLDYRSGQPIPAWVREVIDAHLAIETEDARSAGALGFMARALVIATMPYKD
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCCCC
PKTDVFKRQNGDFRLRIIAGYEGGIPYGIYPRLLMSWVSTEAVRTRSPVIQLGDSLRAFL
CCCHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RDVMDLRSTGGGVRGSGTRVA
HHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA