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The map label for this gene is iscR [H]

Identifier: 119898309

GI number: 119898309

Start: 2222358

End: 2222840

Strand: Reverse

Name: iscR [H]

Synonym: azo2018

Alternate gene names: 119898309

Gene position: 2222840-2222358 (Counterclockwise)

Preceding gene: 119898310

Following gene: 119898308

Centisome position: 50.8

GC content: 64.6

Gene sequence:

>483_bases
ATGAGGCTTACCACGAAAGGGCGTTTCGCCGTCACTGCGATGATCGACCTCGCGTCCCGCCAGGCCGACGGCCCGGTGAC
GCTCGCAGGCATCGCGGACCGTCAGAAGATTTCCTTGTCCTATCTGGAACAGCTGTTCGGCAAGTTGCGCCGCCATAAGC
TGGTCAGCAGCGTGCGCGGCCCGGGTGGTGGGTACCGGCTGGCGCGCGACATGGCGGCCATTACCGTCGCCGACATCATC
ATCGCGGTGGATGAGCCGCTGGATGCGACGCAGTGCGGCGGCAAGCAGAACTGTCACGACGAGCACCGCTGCGTCACTCA
CGACCTGTGGGCGAATCTGAACAAGCGCATGTACGCGTATCTGGATTCGGTTTCGCTGGCCGCGCTGGTGCAACGCGAGA
TCAAGCCGGACCCGGACATGAACGTGCTCAAGGACGTGCGTCGTCGCGCCGCGATTGCCCTGCGCGAGACTGCCGCTGCC
TGA

Upstream 100 bases:

>100_bases
TAGTTGACCGATTTTGTCGGAATACGTATAGTTGAGCGAAACGTTCGGGTATTCTCCCGGCGCGATCCTTCGACTGCGGT
CGAAGCTTGAAGGAGACACC

Downstream 100 bases:

>100_bases
CGCCCCATGTTCCGTCCGGCCTACCTCGACTGGAACGCCACCACGCCGCTCGATCCGGCCGTGCGCGATGCGATGCTGCC
GTGGCTGGGTGAGCGCTTCG

Product: Rrf2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MRLTTKGRFAVTAMIDLASRQADGPVTLAGIADRQKISLSYLEQLFGKLRRHKLVSSVRGPGGGYRLARDMAAITVADII
IAVDEPLDATQCGGKQNCHDEHRCVTHDLWANLNKRMYAYLDSVSLAALVQREIKPDPDMNVLKDVRRRAAIALRETAAA

Sequences:

>Translated_160_residues
MRLTTKGRFAVTAMIDLASRQADGPVTLAGIADRQKISLSYLEQLFGKLRRHKLVSSVRGPGGGYRLARDMAAITVADII
IAVDEPLDATQCGGKQNCHDEHRCVTHDLWANLNKRMYAYLDSVSLAALVQREIKPDPDMNVLKDVRRRAAIALRETAAA
>Mature_160_residues
MRLTTKGRFAVTAMIDLASRQADGPVTLAGIADRQKISLSYLEQLFGKLRRHKLVSSVRGPGGGYRLARDMAAITVADII
IAVDEPLDATQCGGKQNCHDEHRCVTHDLWANLNKRMYAYLDSVSLAALVQREIKPDPDMNVLKDVRRRAAIALRETAAA

Specific function: Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=133, Percent_Identity=54.8872180451128, Blast_Score=144, Evalue=3e-36,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17628; Mature: 17628

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTTKGRFAVTAMIDLASRQADGPVTLAGIADRQKISLSYLEQLFGKLRRHKLVSSVRG
CCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGGYRLARDMAAITVADIIIAVDEPLDATQCGGKQNCHDEHRCVTHDLWANLNKRMYAY
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LDSVSLAALVQREIKPDPDMNVLKDVRRRAAIALRETAAA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLTTKGRFAVTAMIDLASRQADGPVTLAGIADRQKISLSYLEQLFGKLRRHKLVSSVRG
CCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGGYRLARDMAAITVADIIIAVDEPLDATQCGGKQNCHDEHRCVTHDLWANLNKRMYAY
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LDSVSLAALVQREIKPDPDMNVLKDVRRRAAIALRETAAA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA