| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is yfcB [C]
Identifier: 119898299
GI number: 119898299
Start: 2214717
End: 2215679
Strand: Direct
Name: yfcB [C]
Synonym: azo2008
Alternate gene names: 119898299
Gene position: 2214717-2215679 (Clockwise)
Preceding gene: 119898298
Following gene: 119898300
Centisome position: 50.61
GC content: 64.07
Gene sequence:
>963_bases ATGAGCCATCACGAAAACCCCGCCTGCGACGATCCCGACTGCAACGACGCGGATCACGACCACGAGCACGAGCACGGTCC GCTGGCCGAACTGGTTACGGTACGAGACTGGCTGCGCTATGCACTGACCCGCTTCAACCGCGAACGCATCTTCTGCGGCC ACGGCGTGCTGGATACCTACGACGAAGCGGTGTGGCTGATCCTGTCGACGCTCGCCCTTCCGCTCGACCGCCTGGAGCCC TTCCTCGATGCCTGCATTCCGTCGGACGAGCGGGTGCAGATCTTCGAAGCGATCGAGCGGCGGGTGGTTGACCGGGTGCC GACCGCCTACATCACCCAGGAAGCCTGGCTGGGCGAATTCCGCTTCCACGTGGATGAACGGGTGATCGTGCCGCGGTCCT TCTTTGCCGAACTGCTGGAAGAAGGCATGGCGCCTTGGGTCGAGGACCCCGAACAGGTCAGCAGCGCGCTCGACCTGTGT ACCGGCTCCGGCTGCCTCGCCATCCTGATGGCGCACGCGTTTCCCAATGCCCAGATCGTCGGCGTCGACCTCTCCGACGA TGCGCTGGATGTCGCCGCCGAAAACGTGGCCGACTACGGTCTGGAAGATCGCGTGGAACTGGTCAAGAGCGATGTGTTCG ATGCGCTCGACGGGCGTCGCTTCGATTTCATTCTGAGCAATCCGCCGTATGTCACGGCCGACGCCATGGCGTCCTTGCCG CCGGAATACCTGCATGAACCCCGCATGGCGCTGGCAGCCGGTGACGACGGGTTGGACGTTGTGCGCCGCCTGCTGGCGCA AGCCCGTGACCACCTGACGCCCAAGGGTTTTCTGGCGGTGGAAGTCGGGCATAATCGCGACATCGTCGAAGCCGCTTTCC CCGAGCTGTCCTTTACCTGGCTGTCGTGCCGCGGCGGCGACGACATGATCTTTCTGCTGCACCGCGACGAACTGCCCGGT TGA
Upstream 100 bases:
>100_bases TCCATCAGGTGAACGAACACATTGCGGTCGATGCGGTCGAGCCCCTGTCCAAGATCTACGAGCGCACCTTGCGCGCCCTG CTTACTGCCTGAGGCTGTCG
Downstream 100 bases:
>100_bases TCCAATGCCAGGGCAGCCGCCCGCACCGAGTGCGCGGCGGAGCCCCGCTCACTGAGGAGACACTGGCATGCCAAGCGAAC GTCCGATTCTGCTGGTCGAG
Product: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSHHENPACDDPDCNDADHDHEHEHGPLAELVTVRDWLRYALTRFNRERIFCGHGVLDTYDEAVWLILSTLALPLDRLEP FLDACIPSDERVQIFEAIERRVVDRVPTAYITQEAWLGEFRFHVDERVIVPRSFFAELLEEGMAPWVEDPEQVSSALDLC TGSGCLAILMAHAFPNAQIVGVDLSDDALDVAAENVADYGLEDRVELVKSDVFDALDGRRFDFILSNPPYVTADAMASLP PEYLHEPRMALAAGDDGLDVVRRLLAQARDHLTPKGFLAVEVGHNRDIVEAAFPELSFTWLSCRGGDDMIFLLHRDELPG
Sequences:
>Translated_320_residues MSHHENPACDDPDCNDADHDHEHEHGPLAELVTVRDWLRYALTRFNRERIFCGHGVLDTYDEAVWLILSTLALPLDRLEP FLDACIPSDERVQIFEAIERRVVDRVPTAYITQEAWLGEFRFHVDERVIVPRSFFAELLEEGMAPWVEDPEQVSSALDLC TGSGCLAILMAHAFPNAQIVGVDLSDDALDVAAENVADYGLEDRVELVKSDVFDALDGRRFDFILSNPPYVTADAMASLP PEYLHEPRMALAAGDDGLDVVRRLLAQARDHLTPKGFLAVEVGHNRDIVEAAFPELSFTWLSCRGGDDMIFLLHRDELPG >Mature_319_residues SHHENPACDDPDCNDADHDHEHEHGPLAELVTVRDWLRYALTRFNRERIFCGHGVLDTYDEAVWLILSTLALPLDRLEPF LDACIPSDERVQIFEAIERRVVDRVPTAYITQEAWLGEFRFHVDERVIVPRSFFAELLEEGMAPWVEDPEQVSSALDLCT GSGCLAILMAHAFPNAQIVGVDLSDDALDVAAENVADYGLEDRVELVKSDVFDALDGRRFDFILSNPPYVTADAMASLPP EYLHEPRMALAAGDDGLDVVRRLLAQARDHLTPKGFLAVEVGHNRDIVEAAFPELSFTWLSCRGGDDMIFLLHRDELPG
Specific function: Unknown
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=267, Percent_Identity=25.4681647940075, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI87082085, Length=289, Percent_Identity=43.9446366782007, Blast_Score=245, Evalue=2e-66, Organism=Escherichia coli, GI1787463, Length=207, Percent_Identity=31.4009661835749, Blast_Score=97, Evalue=2e-21, Organism=Drosophila melanogaster, GI24582226, Length=190, Percent_Identity=31.0526315789474, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR017127 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 35917; Mature: 35785
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHHENPACDDPDCNDADHDHEHEHGPLAELVTVRDWLRYALTRFNRERIFCGHGVLDTY CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH DEAVWLILSTLALPLDRLEPFLDACIPSDERVQIFEAIERRVVDRVPTAYITQEAWLGEF HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RFHVDERVIVPRSFFAELLEEGMAPWVEDPEQVSSALDLCTGSGCLAILMAHAFPNAQIV HHCCCCEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEE GVDLSDDALDVAAENVADYGLEDRVELVKSDVFDALDGRRFDFILSNPPYVTADAMASLP EEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHCC PEYLHEPRMALAAGDDGLDVVRRLLAQARDHLTPKGFLAVEVGHNRDIVEAAFPELSFTW HHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHCCCCEEEE LSCRGGDDMIFLLHRDELPG EEECCCCCEEEEEECCCCCC >Mature Secondary Structure SHHENPACDDPDCNDADHDHEHEHGPLAELVTVRDWLRYALTRFNRERIFCGHGVLDTY CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH DEAVWLILSTLALPLDRLEPFLDACIPSDERVQIFEAIERRVVDRVPTAYITQEAWLGEF HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RFHVDERVIVPRSFFAELLEEGMAPWVEDPEQVSSALDLCTGSGCLAILMAHAFPNAQIV HHCCCCEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEE GVDLSDDALDVAAENVADYGLEDRVELVKSDVFDALDGRRFDFILSNPPYVTADAMASLP EEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHCC PEYLHEPRMALAAGDDGLDVVRRLLAQARDHLTPKGFLAVEVGHNRDIVEAAFPELSFTW HHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHCCCCEEEE LSCRGGDDMIFLLHRDELPG EEECCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]