| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is hyuE [H]
Identifier: 119898249
GI number: 119898249
Start: 2154237
End: 2154995
Strand: Reverse
Name: hyuE [H]
Synonym: azo1958
Alternate gene names: 119898249
Gene position: 2154995-2154237 (Counterclockwise)
Preceding gene: 119898250
Following gene: 119898248
Centisome position: 49.25
GC content: 65.74
Gene sequence:
>759_bases ATGCCCAGAAAAATCAAAATGATTTTCCCCGTCCCCATGAGCGACGCCACGCGTCCGATGGTGGAATCCCAGCTTCCGCC CGGTGTGCGTCGGCCCGACATCGAGGTGGAATTCGTCGGCGCCGGCCGGGTAATGACGCTGGCCGACAGCTACTACGACA TGGCCATCATGGAGATGGCGGTGATCGAGGCCGGCATGCGGGCGCAGGACGACGGTTTCGACGCGGTGTGCATCAACACC GTCAGCGATTCCGGCCTCGCCGCGCTGCGCGCGCGGCTTTCCATCCCGGTGCTGGCGCCGGGGCAGAGCGCCTTTCACCT TGCGGCGATGCTCGGCCACCGCTTCTCCATCCTCACCATGTGGCCGCGCTGGTATCCGCTGTATCGCAAGACCATCAAGG AATACGGGCTGGAGTCGCGGCTCGCCTCGATCCGCTCGATCGACGTGCGGCCCGACGCCGCCGCGCTGCTATCCGGCAAG GAGGAGGTCGTGTTCGGCAAACTGGAGGAGGCCGCGCGCGATGCCATCGCCAAAGAGGGCGCCGATGTGATCGTGCTCGG CTCCACCACCATGCACCAGTCCCACGCCCATCTCGCCGCGCATCTGCCGGTGCCGGTGCTCAACCCCGGCGTGGTCGCCT ACAAGCTGTGCGAACTCTTCCTCGACCTCGGCCTCGCGCACAGCAAGCTCGCCTACCCGTCGCCCGAAACCCTCAAGGAC GAGGCCTTCCACGCTGCAAGCAAGGAGGTGAACACATGA
Upstream 100 bases:
>100_bases TTGGACAGGCGAGGGGGCCGCGCAAACCCCATCCCCACCCCAACCCTCCCCTTGAAGGGGAGGGGGAAGAAACCCGAACG CCGCCAACCGGAGAACAGCC
Downstream 100 bases:
>100_bases GCACCGCACACCTGGAGACACCCGCAAGCCGCTTCGTCACGGTGGACGGCCTGCGCCTGCACTACCAGCAGATCGACGGC CCGCAGGACAGCCTGCCAGT
Product: putative Hydantoin racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MPRKIKMIFPVPMSDATRPMVESQLPPGVRRPDIEVEFVGAGRVMTLADSYYDMAIMEMAVIEAGMRAQDDGFDAVCINT VSDSGLAALRARLSIPVLAPGQSAFHLAAMLGHRFSILTMWPRWYPLYRKTIKEYGLESRLASIRSIDVRPDAAALLSGK EEVVFGKLEEAARDAIAKEGADVIVLGSTTMHQSHAHLAAHLPVPVLNPGVVAYKLCELFLDLGLAHSKLAYPSPETLKD EAFHAASKEVNT
Sequences:
>Translated_252_residues MPRKIKMIFPVPMSDATRPMVESQLPPGVRRPDIEVEFVGAGRVMTLADSYYDMAIMEMAVIEAGMRAQDDGFDAVCINT VSDSGLAALRARLSIPVLAPGQSAFHLAAMLGHRFSILTMWPRWYPLYRKTIKEYGLESRLASIRSIDVRPDAAALLSGK EEVVFGKLEEAARDAIAKEGADVIVLGSTTMHQSHAHLAAHLPVPVLNPGVVAYKLCELFLDLGLAHSKLAYPSPETLKD EAFHAASKEVNT >Mature_251_residues PRKIKMIFPVPMSDATRPMVESQLPPGVRRPDIEVEFVGAGRVMTLADSYYDMAIMEMAVIEAGMRAQDDGFDAVCINTV SDSGLAALRARLSIPVLAPGQSAFHLAAMLGHRFSILTMWPRWYPLYRKTIKEYGLESRLASIRSIDVRPDAAALLSGKE EVVFGKLEEAARDAIAKEGADVIVLGSTTMHQSHAHLAAHLPVPVLNPGVVAYKLCELFLDLGLAHSKLAYPSPETLKDE AFHAASKEVNT
Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]
COG id: COG4126
COG function: function code E; Hydantoin racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.99.5 [H]
Molecular weight: Translated: 27511; Mature: 27380
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKIKMIFPVPMSDATRPMVESQLPPGVRRPDIEVEFVGAGRVMTLADSYYDMAIMEMA CCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHH VIEAGMRAQDDGFDAVCINTVSDSGLAALRARLSIPVLAPGQSAFHLAAMLGHRFSILTM HHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCEEECCCCHHHHHHHHHCCCEEEEEE WPRWYPLYRKTIKEYGLESRLASIRSIDVRPDAAALLSGKEEVVFGKLEEAARDAIAKEG CCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHCC ADVIVLGSTTMHQSHAHLAAHLPVPVLNPGVVAYKLCELFLDLGLAHSKLAYPSPETLKD CCEEEECCCCCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH EAFHAASKEVNT HHHHHHHHCCCC >Mature Secondary Structure PRKIKMIFPVPMSDATRPMVESQLPPGVRRPDIEVEFVGAGRVMTLADSYYDMAIMEMA CCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHH VIEAGMRAQDDGFDAVCINTVSDSGLAALRARLSIPVLAPGQSAFHLAAMLGHRFSILTM HHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCEEECCCCHHHHHHHHHCCCEEEEEE WPRWYPLYRKTIKEYGLESRLASIRSIDVRPDAAALLSGKEEVVFGKLEEAARDAIAKEG CCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHCC ADVIVLGSTTMHQSHAHLAAHLPVPVLNPGVVAYKLCELFLDLGLAHSKLAYPSPETLKD CCEEEECCCCCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH EAFHAASKEVNT HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339422 [H]