Click here to switch to the map view.

The map label for this gene is 119898241

Identifier: 119898241

GI number: 119898241

Start: 2142429

End: 2143481

Strand: Direct

Name: 119898241

Synonym: azo1950

Alternate gene names: NA

Gene position: 2142429-2143481 (Clockwise)

Preceding gene: 119898239

Following gene: 119898242

Centisome position: 48.96

GC content: 73.79

Gene sequence:

>1053_bases
ATGCCAGACCAGATCGCTTCCCTTTCGCCGCCGCCCGCCGCGGCCGCTTCCAAACCCGCCCGCTCGGCGGCCAGCTACGT
CGTCAGCGCCCTGCCCTGGGCGATCATCGGCGGGCTGTTGTGGGCGGGCCTGTTCGTGAAGCCGCAGCCGGTGGGCGCCA
CCTTGCAGCCGCCGGTGCTGGAGCGGCGCGATCACTACTACGGCCTGGCGGTCGGCCCCGAGGGCCGGCTGCTCGCGGTG
GGATCCGGCGGCAAGATCCTGCGCATCGACAGCGCGTCGGGCCGCATCGACCGCGTGCCCGCCCCCACCACGCAGACGCT
GCAGGACGTCGCCACCTGGGATGCCGGCCGCGCCGTGGCGGTCGGCAACGACGGCGTGATCCTGGTCTCCGGCGATGGCG
GCGCGAGCTGGCAGCAGGTGGCGGAGGTGCCGCGCTCCGAGGTGGCGAACAAGCTCACCCGGGTGGAAACCGGCGCCGAC
GGGCTCGCTGTCGCCACCGGGGAAATGGGCGCCTTGCTGATCACCCGCGACTACGGCGCCACCTGGTCGCGCCTGCGCGA
CGAGGAAGACCTGGCCTGGAACGACGTCGCGCTGCCCGGCGGGGCGCGCATCGTGGTGGTGGGCGAATTCGGCCGCATCC
TGGTCAGCGACGATGGTGGCAGCCACTGGACCGAGCCGCCGGCGCCGGTCGGCAGCTCGCTGATGGCGGTCGCCTTCCGC
GACGCCACCCACGGCGTGGCAGTGGGCCTGGAAGGCGTGGTGCTGCAGACGCGCGATGGCGGCCACACCTGGACCGCGGC
CGAGCTCGGCTTCCACGACCACCTTTTCGACATTGCCTGGGATGCCGCGCAGCAGCGCTGGGTCGGCGCCGGCGCGCTCG
GGCGCTGGATCGCCGCCGATGCGCAGGCGGCGCAGTGGCAGAGCGGCCGCCTGCACGAGCGCGATCTCTCCTGGCACACC
CGCGTGCTGCCGGTGGCTGGCGGCCCGGCGTGGTTTGCCGGCGCCAACATCGGCCGCTGGGACGGCCAGGCCTGGAACAC
CCTCGGCAACTGA

Upstream 100 bases:

>100_bases
GGGCGGATAGTCCCTCTGGGGCGCGGGCTCTAGCTTAGAGGGCACAAAAAGCCGTCAAGGCGAAACCCCCAAACGCACCC
GACAGAACGACATGGACCGC

Downstream 100 bases:

>100_bases
AGCGCGCGCCCGCGCGTGATCGCCCCAAAACAGAGAGCAGAAAAATGATCGAACGCATTGCGGAGTTCTGTATCCGCCGC
CGCAACCTGGTCGTCGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: BNR/Asp-Box Repeat-Containing Protein; BNR Domain-Containing Protein; Glycosyl Hydrolase; Glycosyl Hydrolase BNR Repeat; Glycosyl Hydrolase BNR Repeat-Containing Glycosyl Hydrolase; Glycosyl Hydrolase BNR Protein; BNR/Asp-Box Repeat Protein

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MPDQIASLSPPPAAAASKPARSAASYVVSALPWAIIGGLLWAGLFVKPQPVGATLQPPVLERRDHYYGLAVGPEGRLLAV
GSGGKILRIDSASGRIDRVPAPTTQTLQDVATWDAGRAVAVGNDGVILVSGDGGASWQQVAEVPRSEVANKLTRVETGAD
GLAVATGEMGALLITRDYGATWSRLRDEEDLAWNDVALPGGARIVVVGEFGRILVSDDGGSHWTEPPAPVGSSLMAVAFR
DATHGVAVGLEGVVLQTRDGGHTWTAAELGFHDHLFDIAWDAAQQRWVGAGALGRWIAADAQAAQWQSGRLHERDLSWHT
RVLPVAGGPAWFAGANIGRWDGQAWNTLGN

Sequences:

>Translated_350_residues
MPDQIASLSPPPAAAASKPARSAASYVVSALPWAIIGGLLWAGLFVKPQPVGATLQPPVLERRDHYYGLAVGPEGRLLAV
GSGGKILRIDSASGRIDRVPAPTTQTLQDVATWDAGRAVAVGNDGVILVSGDGGASWQQVAEVPRSEVANKLTRVETGAD
GLAVATGEMGALLITRDYGATWSRLRDEEDLAWNDVALPGGARIVVVGEFGRILVSDDGGSHWTEPPAPVGSSLMAVAFR
DATHGVAVGLEGVVLQTRDGGHTWTAAELGFHDHLFDIAWDAAQQRWVGAGALGRWIAADAQAAQWQSGRLHERDLSWHT
RVLPVAGGPAWFAGANIGRWDGQAWNTLGN
>Mature_349_residues
PDQIASLSPPPAAAASKPARSAASYVVSALPWAIIGGLLWAGLFVKPQPVGATLQPPVLERRDHYYGLAVGPEGRLLAVG
SGGKILRIDSASGRIDRVPAPTTQTLQDVATWDAGRAVAVGNDGVILVSGDGGASWQQVAEVPRSEVANKLTRVETGADG
LAVATGEMGALLITRDYGATWSRLRDEEDLAWNDVALPGGARIVVVGEFGRILVSDDGGSHWTEPPAPVGSSLMAVAFRD
ATHGVAVGLEGVVLQTRDGGHTWTAAELGFHDHLFDIAWDAAQQRWVGAGALGRWIAADAQAAQWQSGRLHERDLSWHTR
VLPVAGGPAWFAGANIGRWDGQAWNTLGN

Specific function: Unknown

COG id: COG4447

COG function: function code R; Uncharacterized protein related to plant photosystem II stability/assembly factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36735; Mature: 36603

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDQIASLSPPPAAAASKPARSAASYVVSALPWAIIGGLLWAGLFVKPQPVGATLQPPVL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCHH
ERRDHYYGLAVGPEGRLLAVGSGGKILRIDSASGRIDRVPAPTTQTLQDVATWDAGRAVA
HCCCCEEEEEECCCCCEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEE
VGNDGVILVSGDGGASWQQVAEVPRSEVANKLTRVETGADGLAVATGEMGALLITRDYGA
ECCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCC
TWSRLRDEEDLAWNDVALPGGARIVVVGEFGRILVSDDGGSHWTEPPAPVGSSLMAVAFR
HHHHHCCCCCCCCCCEECCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEEEE
DATHGVAVGLEGVVLQTRDGGHTWTAAELGFHDHLFDIAWDAAQQRWVGAGALGRWIAAD
CCCCCEEECCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCC
AQAAQWQSGRLHERDLSWHTRVLPVAGGPAWFAGANIGRWDGQAWNTLGN
CHHHHCCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCHHCCCC
>Mature Secondary Structure 
PDQIASLSPPPAAAASKPARSAASYVVSALPWAIIGGLLWAGLFVKPQPVGATLQPPVL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCHH
ERRDHYYGLAVGPEGRLLAVGSGGKILRIDSASGRIDRVPAPTTQTLQDVATWDAGRAVA
HCCCCEEEEEECCCCCEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEE
VGNDGVILVSGDGGASWQQVAEVPRSEVANKLTRVETGADGLAVATGEMGALLITRDYGA
ECCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCC
TWSRLRDEEDLAWNDVALPGGARIVVVGEFGRILVSDDGGSHWTEPPAPVGSSLMAVAFR
HHHHHCCCCCCCCCCEECCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEEEE
DATHGVAVGLEGVVLQTRDGGHTWTAAELGFHDHLFDIAWDAAQQRWVGAGALGRWIAAD
CCCCCEEECCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCC
AQAAQWQSGRLHERDLSWHTRVLPVAGGPAWFAGANIGRWDGQAWNTLGN
CHHHHCCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA