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The map label for this gene is tsf

Identifier: 119898199

GI number: 119898199

Start: 2091541

End: 2092434

Strand: Reverse

Name: tsf

Synonym: azo1908

Alternate gene names: 119898199

Gene position: 2092434-2091541 (Counterclockwise)

Preceding gene: 119898200

Following gene: 119898198

Centisome position: 47.82

GC content: 64.32

Gene sequence:

>894_bases
ATGGCGGAAATCACCGCAAGCATGGTCAAGGAACTGCGCGAGAAGACCGACGCGCCGATGATGGAATGCAAGAAGGCACT
GACCGAAGCCGGCGGCGACATGGCCAAGGCTGAAGAAGTGCTGCGTATCAAGCTCGGCAACAAGGCCTCCAAGGCCGCCG
CGCGCGTCACCGCCGAAGGCATCGTCGGCACCTACCTGTCGGCCGACGGCAAGCTGGCCGCGATGGTCGAACTGAACTGC
GAAACCGACTTCGTCGCCAAGAACGACGACTTCATCGGCCTCGCCGGTTCGCTCGCAACCCTGGTTGCCACCAAGAACCC
GGCCGACGTCGAAGCGCTGTCCGCGCTCGAACTCGACGGCCAGACCGTCGAAGCCTTCCGCACCGCGCTGGTCGGCAAGA
TCGGCGAAAACATCACCGTCCGCCGCTTCTCCCGCATCGAGGCCAAGGGCCAGGTCGCGAGCTATGTCCACGCCGGCGCC
AAGATCGGCGTGCTGGTTGATCTGGTCGGTGGTGACGAGCAACTCGCCAAGGATCTGGCCATGCACATCGCCGCGTCCAA
GCCGAAGTCGCTGGATGCCTCCGGCGTGTCGCAGGAACTGATCGAATCCGAGCGTCGCATCGCGGTCGAGAAGGCGCGCG
AAGCCGGCAAGCCGGAAGCCATGCTCGAGAAGATCGCCGAAGGCACCGTGCAGAAGTTCCTGAAGGAAGTGACCCTGCTC
GGCCAGCCCTTCGTCAAGGACGACAAGCAGACCGTCGAAGCCCTGCTGAAGGCGCGTGGCGCCTCGGTGGCGTCCTTCGT
GCTGTACATCGTCGGCGAAGGCATCGAGAAGAAAGTGACCGACTTCGCCGCCGAAGTGGCCGAGCAGGCTGCCGCGGCGG
CTGCCAAGAAGTAA

Upstream 100 bases:

>100_bases
GCGCGCTCGCAGTGCGAGCGTGCCGGGCATCACGTGAAATTCCCCGCGCGGCGGCCGCGTCTTGTGACGGGCGGTCGCGC
CCAGCAATCCAGGAGCTAAC

Downstream 100 bases:

>100_bases
GGAGCACTACGTGACCGCTGCCGCTTACAAGCGCATCCTGCTGAAGCTTTCCGGCGAAGCCCTGATGGGGGACGACGCCT
ACGGAATCAACGAAGATGTG

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MAEITASMVKELREKTDAPMMECKKALTEAGGDMAKAEEVLRIKLGNKASKAAARVTAEGIVGTYLSADGKLAAMVELNC
ETDFVAKNDDFIGLAGSLATLVATKNPADVEALSALELDGQTVEAFRTALVGKIGENITVRRFSRIEAKGQVASYVHAGA
KIGVLVDLVGGDEQLAKDLAMHIAASKPKSLDASGVSQELIESERRIAVEKAREAGKPEAMLEKIAEGTVQKFLKEVTLL
GQPFVKDDKQTVEALLKARGASVASFVLYIVGEGIEKKVTDFAAEVAEQAAAAAAKK

Sequences:

>Translated_297_residues
MAEITASMVKELREKTDAPMMECKKALTEAGGDMAKAEEVLRIKLGNKASKAAARVTAEGIVGTYLSADGKLAAMVELNC
ETDFVAKNDDFIGLAGSLATLVATKNPADVEALSALELDGQTVEAFRTALVGKIGENITVRRFSRIEAKGQVASYVHAGA
KIGVLVDLVGGDEQLAKDLAMHIAASKPKSLDASGVSQELIESERRIAVEKAREAGKPEAMLEKIAEGTVQKFLKEVTLL
GQPFVKDDKQTVEALLKARGASVASFVLYIVGEGIEKKVTDFAAEVAEQAAAAAAKK
>Mature_296_residues
AEITASMVKELREKTDAPMMECKKALTEAGGDMAKAEEVLRIKLGNKASKAAARVTAEGIVGTYLSADGKLAAMVELNCE
TDFVAKNDDFIGLAGSLATLVATKNPADVEALSALELDGQTVEAFRTALVGKIGENITVRRFSRIEAKGQVASYVHAGAK
IGVLVDLVGGDEQLAKDLAMHIAASKPKSLDASGVSQELIESERRIAVEKAREAGKPEAMLEKIAEGTVQKFLKEVTLLG
QPFVKDDKQTVEALLKARGASVASFVLYIVGEGIEKKVTDFAAEVAEQAAAAAAKK

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI171846268, Length=288, Percent_Identity=28.4722222222222, Blast_Score=83, Evalue=3e-16,
Organism=Escherichia coli, GI1786366, Length=287, Percent_Identity=48.4320557491289, Blast_Score=235, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI17561440, Length=289, Percent_Identity=29.4117647058824, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI19921466, Length=287, Percent_Identity=28.2229965156794, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_AZOSB (A1K6S0)

Other databases:

- EMBL:   AM406670
- RefSeq:   YP_933412.1
- ProteinModelPortal:   A1K6S0
- SMR:   A1K6S0
- STRING:   A1K6S0
- GeneID:   4609674
- GenomeReviews:   AM406670_GR
- KEGG:   azo:azo1908
- eggNOG:   COG0264
- HOGENOM:   HBG713289
- OMA:   YLHGTRI
- PhylomeDB:   A1K6S0
- ProtClustDB:   PRK09377
- BioCyc:   ASP62928:AZO1908-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 31320; Mature: 31189

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEITASMVKELREKTDAPMMECKKALTEAGGDMAKAEEVLRIKLGNKASKAAARVTAEG
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
IVGTYLSADGKLAAMVELNCETDFVAKNDDFIGLAGSLATLVATKNPADVEALSALELDG
HHHHHCCCCCCEEEEEEECCCCCEEECCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHCCC
QTVEAFRTALVGKIGENITVRRFSRIEAKGQVASYVHAGAKIGVLVDLVGGDEQLAKDLA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHH
MHIAASKPKSLDASGVSQELIESERRIAVEKAREAGKPEAMLEKIAEGTVQKFLKEVTLL
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
GQPFVKDDKQTVEALLKARGASVASFVLYIVGEGIEKKVTDFAAEVAEQAAAAAAKK
CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AEITASMVKELREKTDAPMMECKKALTEAGGDMAKAEEVLRIKLGNKASKAAARVTAEG
CCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
IVGTYLSADGKLAAMVELNCETDFVAKNDDFIGLAGSLATLVATKNPADVEALSALELDG
HHHHHCCCCCCEEEEEEECCCCCEEECCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHCCC
QTVEAFRTALVGKIGENITVRRFSRIEAKGQVASYVHAGAKIGVLVDLVGGDEQLAKDLA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHH
MHIAASKPKSLDASGVSQELIESERRIAVEKAREAGKPEAMLEKIAEGTVQKFLKEVTLL
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
GQPFVKDDKQTVEALLKARGASVASFVLYIVGEGIEKKVTDFAAEVAEQAAAAAAKK
CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA