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The map label for this gene is 119898129

Identifier: 119898129

GI number: 119898129

Start: 2018425

End: 2019552

Strand: Direct

Name: 119898129

Synonym: azo1838

Alternate gene names: NA

Gene position: 2018425-2019552 (Clockwise)

Preceding gene: 119898128

Following gene: 119898130

Centisome position: 46.12

GC content: 74.91

Gene sequence:

>1128_bases
ATGAACACCAGAATCTCTACCCGGCGGCGGGTCGGGGCGGTCTTGCTCGCCCTCGGCCTGACGCTGCCGCCGCTGCACGC
GGCCGCCCCGGAAGCGCCATCCGCCGCGCGCTTCGATCTGCTCGAACGGCCGGCGGCCAGCTCGCCGCGCGCCAACACCG
CGCTGCTGCTGGCGATCACCCGTGCCGGCGACCGCCTGGTGGCGGTGGGCGAGCGCGGCACCGTGCTGCTGTCCGACGAC
AACGGCGCGCGCTGGCGCCAGGCCGACGCGGTGCCGGTGAGCGTGGCGCTGACCAATGTGCACTTCGCCGATGCGCAGCA
CGGCTGGGCGGTGGGGCATGGCGGGGTGGTGCTGCATAGCGCGGACGGCGGCAAAACCTGGGTGCGCCAGCTCGAGGGCC
GCGAGGCGGCGCAGCGCGTGCTGGAAGCGGCGCAGGCCGCCGCCGCGGGCGATGCCGCCGGCGATGCCGCCGGCGCGCGC
CGGCTGGCGGATGCGCAGCGTCTCGTCGAGGACGGCCCCGACAAGCCGCTGCTCGACGTGCATTTCGTCGATGCGCAGCG
CGGCTTCGTGGTCGGCGCCTACGGCCTGGCGCTGGCGACCGAGGACGGCGGCCGCAGCTGGCACTCGATCATGGACCGCA
TCGGCGACCCGCGCGGCCGCCATCTCTACGCCATCGCCCGCCAGGGGGCGCGCCTGCTGGTGGTGGGCGAGCAGGGCGCG
ATGTTCGCGTCGGAAGACGGCGGCGCCAGCTTCGCGCCGCTCGCCTCGCCCTACAACGGCACCTTCTTCGGCGCGCTCAT
TGCCGGCGACGGCGCGGTGGTGTTCGGCCTGCGCGGCAACCTTTTCCACCAGCCGGCGCCCGGCGCCACGTGGACCAAGG
TGAACACCGGCCGCGGCGAATCGGTGATCGCCGGCACGCGGCTCGCCGACGGCGCGCTGGTGCTGGTGGACGAGGCCGGC
CGCCTGCTGCGCAGCAGCGACGGCGGCGCCCGCTTCGAAGAACTGCCGGCCAGCGCCGGGCCGCGCTTCACCGCGCTCGC
CGAGGGCGCCGACAAAACCCTGGTGATGGCCAGCGTGCGCGGCCCGCTGCGCCTCGCCCCGATTGATTCCAGTACGGAAG
GCAAGTGA

Upstream 100 bases:

>100_bases
TGCGCTGATCCTGTCTGCTTCAGCGGTCCCTCCGCGGCCCGTCGGCGGCCGCGGACGCCGCGCTGAGCCGGCCATCGCCG
GCGCCAGGGAACACGACATC

Downstream 100 bases:

>100_bases
TGAACCCCAGTCATACCGGCGCCGCCGATGCCGTGGTGATGCGGCTCGAAGACTTCGACCGCGAGTCCGGTTCGCGCATC
GAGCGCCTGCTGTTCAACCA

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Hydrolase; BNR Repeat-Containing Protein; BNR/Asp-Box Repeat-Containing Protein; BNR Domain-Containing Protein; Glycosyl Hydrolase BNR Repeat Protein; Glycosyl Hydrolase BNR Repeat; BNR/Asp-Box Repeat Protein; BNR/Asp-Box Repeat Domain Protein; Plant Photosystem II Stability/Assembly Factor Protein; Glycosyl Hydrolase BNR Repeat-Containing Glycosyl Hydrolase; Protein Related Photosystem II Stability/Assembly Factor; Oxidoreductase

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MNTRISTRRRVGAVLLALGLTLPPLHAAAPEAPSAARFDLLERPAASSPRANTALLLAITRAGDRLVAVGERGTVLLSDD
NGARWRQADAVPVSVALTNVHFADAQHGWAVGHGGVVLHSADGGKTWVRQLEGREAAQRVLEAAQAAAAGDAAGDAAGAR
RLADAQRLVEDGPDKPLLDVHFVDAQRGFVVGAYGLALATEDGGRSWHSIMDRIGDPRGRHLYAIARQGARLLVVGEQGA
MFASEDGGASFAPLASPYNGTFFGALIAGDGAVVFGLRGNLFHQPAPGATWTKVNTGRGESVIAGTRLADGALVLVDEAG
RLLRSSDGGARFEELPASAGPRFTALAEGADKTLVMASVRGPLRLAPIDSSTEGK

Sequences:

>Translated_375_residues
MNTRISTRRRVGAVLLALGLTLPPLHAAAPEAPSAARFDLLERPAASSPRANTALLLAITRAGDRLVAVGERGTVLLSDD
NGARWRQADAVPVSVALTNVHFADAQHGWAVGHGGVVLHSADGGKTWVRQLEGREAAQRVLEAAQAAAAGDAAGDAAGAR
RLADAQRLVEDGPDKPLLDVHFVDAQRGFVVGAYGLALATEDGGRSWHSIMDRIGDPRGRHLYAIARQGARLLVVGEQGA
MFASEDGGASFAPLASPYNGTFFGALIAGDGAVVFGLRGNLFHQPAPGATWTKVNTGRGESVIAGTRLADGALVLVDEAG
RLLRSSDGGARFEELPASAGPRFTALAEGADKTLVMASVRGPLRLAPIDSSTEGK
>Mature_375_residues
MNTRISTRRRVGAVLLALGLTLPPLHAAAPEAPSAARFDLLERPAASSPRANTALLLAITRAGDRLVAVGERGTVLLSDD
NGARWRQADAVPVSVALTNVHFADAQHGWAVGHGGVVLHSADGGKTWVRQLEGREAAQRVLEAAQAAAAGDAAGDAAGAR
RLADAQRLVEDGPDKPLLDVHFVDAQRGFVVGAYGLALATEDGGRSWHSIMDRIGDPRGRHLYAIARQGARLLVVGEQGA
MFASEDGGASFAPLASPYNGTFFGALIAGDGAVVFGLRGNLFHQPAPGATWTKVNTGRGESVIAGTRLADGALVLVDEAG
RLLRSSDGGARFEELPASAGPRFTALAEGADKTLVMASVRGPLRLAPIDSSTEGK

Specific function: Unknown

COG id: COG4447

COG function: function code R; Uncharacterized protein related to plant photosystem II stability/assembly factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38808; Mature: 38808

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTRISTRRRVGAVLLALGLTLPPLHAAAPEAPSAARFDLLERPAASSPRANTALLLAIT
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEE
RAGDRLVAVGERGTVLLSDDNGARWRQADAVPVSVALTNVHFADAQHGWAVGHGGVVLHS
CCCCEEEEECCCCEEEEECCCCCCEEECCCCEEEEEEEEEEEECCCCCEEEECCCEEEEC
ADGGKTWVRQLEGREAAQRVLEAAQAAAAGDAAGDAAGARRLADAQRLVEDGPDKPLLDV
CCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE
HFVDAQRGFVVGAYGLALATEDGGRSWHSIMDRIGDPRGRHLYAIARQGARLLVVGEQGA
EEEECCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCC
MFASEDGGASFAPLASPYNGTFFGALIAGDGAVVFGLRGNLFHQPAPGATWTKVNTGRGE
EEECCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCCCC
SVIAGTRLADGALVLVDEAGRLLRSSDGGARFEELPASAGPRFTALAEGADKTLVMASVR
EEEEECEECCCEEEEEECCCHHHCCCCCCCHHHHCCCCCCCCEEEEECCCCCEEEEEECC
GPLRLAPIDSSTEGK
CCEEEEECCCCCCCC
>Mature Secondary Structure
MNTRISTRRRVGAVLLALGLTLPPLHAAAPEAPSAARFDLLERPAASSPRANTALLLAIT
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEE
RAGDRLVAVGERGTVLLSDDNGARWRQADAVPVSVALTNVHFADAQHGWAVGHGGVVLHS
CCCCEEEEECCCCEEEEECCCCCCEEECCCCEEEEEEEEEEEECCCCCEEEECCCEEEEC
ADGGKTWVRQLEGREAAQRVLEAAQAAAAGDAAGDAAGARRLADAQRLVEDGPDKPLLDV
CCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE
HFVDAQRGFVVGAYGLALATEDGGRSWHSIMDRIGDPRGRHLYAIARQGARLLVVGEQGA
EEEECCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCC
MFASEDGGASFAPLASPYNGTFFGALIAGDGAVVFGLRGNLFHQPAPGATWTKVNTGRGE
EEECCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCCCC
SVIAGTRLADGALVLVDEAGRLLRSSDGGARFEELPASAGPRFTALAEGADKTLVMASVR
EEEEECEECCCEEEEEECCCHHHCCCCCCCHHHHCCCCCCCCEEEEECCCCCEEEEEECC
GPLRLAPIDSSTEGK
CCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA