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The map label for this gene is yfbG [C]

Identifier: 119898093

GI number: 119898093

Start: 1978903

End: 1979856

Strand: Reverse

Name: yfbG [C]

Synonym: azo1802

Alternate gene names: 119898093

Gene position: 1979856-1978903 (Counterclockwise)

Preceding gene: 119898094

Following gene: 119898091

Centisome position: 45.24

GC content: 70.23

Gene sequence:

>954_bases
ATGGGCGCGCGGCCCTCACCCTTGCGCGTGCTGGTGGCCGGCGGTGCCGGCTTTCTCGGCTCGCATTTGTGCGAACGCCT
GCTGCGCGAGGGCGGCCGCGTGCTCTGCGTCGACAACTTCCAGACCGGCTGCGCCGCCAACGTCGCCCCGCTGCTGCAGC
GCGAGGGCTTCACGCTGCGCGAGCACGACATCACCGCGCCGCTGGAGGCGGATGTCGACCAGATCTACAACCTCGCCTGC
CCCGCGTCGCCGCTGCACTACCGCGAAGACCCGGTGCGCACCGTGCGCACCAGCGTGGTCGGCGCAATGAACCTGCTGGA
GCTGGCCACCCGCACGGGCGCGCGCATCCTGCAGGCCTCCACCAGCGAAATCTATGGCGATCCGGCCGAACATCCGCAGC
AGGAGGCCTACCACGGCAACGTCAACCCGATCGGCCCGCGCGCCTGCTACGACGAGGGCAAGCGCTGCGCGGAAACCCTG
TTCTTCGACTACCACCGCCAGCACGAGCTGCGCACCAAGGTCGCGCGCATCTTCAACACCTACGGCCCGCGCATGCGGCC
GGACGACGGCCGCGTGATCTCCAACTTCGTCGTGCAGGCGCTGCGCGGCCAGCCGCTGACCTTGTACGGCGACGGCAGCC
AGAGCCGTTCGTTCTGCTACGTGGACGACCTGATCGACGGCCTGCTGCGGCTGATGAACAGCGCGGACGACTTCTGCGGC
CCGGTCAATCTGGGCAACCCGGTGGAATCCACCGTGCGCGAGCTGGCCGACGAGGTGATCCGGCTCACCGGCTCGCGCTC
CACGCTGCGCTACCTGCCGCTGCCGGAGGACGACCCGGTGCGGCGCCGGCCCGACATCACGCTGGCGCGCGCGGAACTCG
GCTGGCGGCCCACGACCGCGCTCGAAGACGGCCTGCGCCGCACGATCGATTATTTCGCCCGGGTGGCGACATGA

Upstream 100 bases:

>100_bases
CGGATCGGCGCCGCCGGCCGCCAGACCGCGCTGGAGCGCTTCAACATCGAACGCTTCGTCGCGGACTGGCTCGCGGTGTT
CGCCGAGGTCGCGCGCTGAA

Downstream 100 bases:

>100_bases
GCGGCGGAGTCGTCTCCGCCCGCTCCGCCGGGCTGCTCGCGGCGGCCGCGGCGGCGCTCGGCGAGCGGCGGCGCATCCAC
CGACCTACCCGCCTGCAGCA

Product: putative dTDP-glucose 4,6-dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MGARPSPLRVLVAGGAGFLGSHLCERLLREGGRVLCVDNFQTGCAANVAPLLQREGFTLREHDITAPLEADVDQIYNLAC
PASPLHYREDPVRTVRTSVVGAMNLLELATRTGARILQASTSEIYGDPAEHPQQEAYHGNVNPIGPRACYDEGKRCAETL
FFDYHRQHELRTKVARIFNTYGPRMRPDDGRVISNFVVQALRGQPLTLYGDGSQSRSFCYVDDLIDGLLRLMNSADDFCG
PVNLGNPVESTVRELADEVIRLTGSRSTLRYLPLPEDDPVRRRPDITLARAELGWRPTTALEDGLRRTIDYFARVAT

Sequences:

>Translated_317_residues
MGARPSPLRVLVAGGAGFLGSHLCERLLREGGRVLCVDNFQTGCAANVAPLLQREGFTLREHDITAPLEADVDQIYNLAC
PASPLHYREDPVRTVRTSVVGAMNLLELATRTGARILQASTSEIYGDPAEHPQQEAYHGNVNPIGPRACYDEGKRCAETL
FFDYHRQHELRTKVARIFNTYGPRMRPDDGRVISNFVVQALRGQPLTLYGDGSQSRSFCYVDDLIDGLLRLMNSADDFCG
PVNLGNPVESTVRELADEVIRLTGSRSTLRYLPLPEDDPVRRRPDITLARAELGWRPTTALEDGLRRTIDYFARVAT
>Mature_316_residues
GARPSPLRVLVAGGAGFLGSHLCERLLREGGRVLCVDNFQTGCAANVAPLLQREGFTLREHDITAPLEADVDQIYNLACP
ASPLHYREDPVRTVRTSVVGAMNLLELATRTGARILQASTSEIYGDPAEHPQQEAYHGNVNPIGPRACYDEGKRCAETLF
FDYHRQHELRTKVARIFNTYGPRMRPDDGRVISNFVVQALRGQPLTLYGDGSQSRSFCYVDDLIDGLLRLMNSADDFCGP
VNLGNPVESTVRELADEVIRLTGSRSTLRYLPLPEDDPVRRRPDITLARAELGWRPTTALEDGLRRTIDYFARVAT

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=306, Percent_Identity=54.2483660130719, Blast_Score=360, Evalue=1e-100,
Organism=Homo sapiens, GI7657641, Length=322, Percent_Identity=25.776397515528, Blast_Score=100, Evalue=2e-21,
Organism=Escherichia coli, GI1788589, Length=340, Percent_Identity=27.9411764705882, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI48994969, Length=335, Percent_Identity=26.865671641791, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1788353, Length=338, Percent_Identity=25.7396449704142, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1786974, Length=339, Percent_Identity=25.9587020648968, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1788365, Length=330, Percent_Identity=24.2424242424242, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17539532, Length=306, Percent_Identity=50.9803921568627, Blast_Score=339, Evalue=1e-93,
Organism=Caenorhabditis elegans, GI17568069, Length=339, Percent_Identity=25.6637168141593, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71982035, Length=336, Percent_Identity=25.5952380952381, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71982038, Length=338, Percent_Identity=25.4437869822485, Blast_Score=91, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI115532424, Length=330, Percent_Identity=25.1515151515152, Blast_Score=90, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6319493, Length=337, Percent_Identity=24.9258160237389, Blast_Score=73, Evalue=5e-14,
Organism=Drosophila melanogaster, GI21356223, Length=304, Percent_Identity=55.2631578947368, Blast_Score=360, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 35208; Mature: 35077

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGARPSPLRVLVAGGAGFLGSHLCERLLREGGRVLCVDNFQTGCAANVAPLLQREGFTLR
CCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCEEE
EHDITAPLEADVDQIYNLACPASPLHYREDPVRTVRTSVVGAMNLLELATRTGARILQAS
CCCCCCCCHHCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSEIYGDPAEHPQQEAYHGNVNPIGPRACYDEGKRCAETLFFDYHRQHELRTKVARIFNT
HHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGPRMRPDDGRVISNFVVQALRGQPLTLYGDGSQSRSFCYVDDLIDGLLRLMNSADDFCG
CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHCCHHHCC
PVNLGNPVESTVRELADEVIRLTGSRSTLRYLPLPEDDPVRRRPDITLARAELGWRPTTA
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEHHHCCCCCCHH
LEDGLRRTIDYFARVAT
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GARPSPLRVLVAGGAGFLGSHLCERLLREGGRVLCVDNFQTGCAANVAPLLQREGFTLR
CCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCEEE
EHDITAPLEADVDQIYNLACPASPLHYREDPVRTVRTSVVGAMNLLELATRTGARILQAS
CCCCCCCCHHCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSEIYGDPAEHPQQEAYHGNVNPIGPRACYDEGKRCAETLFFDYHRQHELRTKVARIFNT
HHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGPRMRPDDGRVISNFVVQALRGQPLTLYGDGSQSRSFCYVDDLIDGLLRLMNSADDFCG
CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHCCHHHCC
PVNLGNPVESTVRELADEVIRLTGSRSTLRYLPLPEDDPVRRRPDITLARAELGWRPTTA
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEHHHCCCCCCHH
LEDGLRRTIDYFARVAT
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]