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The map label for this gene is rfaF [C]

Identifier: 119898011

GI number: 119898011

Start: 1885699

End: 1886832

Strand: Direct

Name: rfaF [C]

Synonym: azo1720

Alternate gene names: 119898011

Gene position: 1885699-1886832 (Clockwise)

Preceding gene: 119898010

Following gene: 119898013

Centisome position: 43.09

GC content: 74.69

Gene sequence:

>1134_bases
GTGCGGCCGGAGGGCTTCGTCGCGGCGCGGGCTGCGGCCCGGCCCTTCGGCGAGGTGGACGAGATCGCGGTGCTGCGCCC
CAGCGGGCTGGGCGACTTCATCTTCGCGCTGCCCGCGCTGGAAGCCCTGCGCGAACGCTACCCGCATGCACGCATCACCC
TGCTCGCCAAGGGCTGGCATCGCAGCTTCCTGAAGGGGCGAACGCGCCTGGTGGACGAGGTGGTCGCGCTGCCGCCGATT
CCCGGCGTCGGCGCACCGCCCGGGCACGCGGCCGACGAGGCAGCGATCGACGCCTGTGTGGAAGCGTTGCGCGCGCGCGC
CTTCGACCTCGCGTTCCAGTTCCACGGCGGTGGCCGCTATTCCAACCCTTTCCTGCTGCGGCTCGGCGCACGCCACAGCT
TCGGCCTGCTCGCGCCGGGGGCGACGCCCTTGCCGCACTGCGTGCCCTACGAGCTGTGGCAGAACGAACGCCTGCGGCTG
CTCGAGGTCGCGGCCCTGGCCGACGCGCGCCCGGTGGAGCTGGAGCCGCTGCTGCCGGTGCTGCCGCGCGATCGGCGCGA
ACTCGGCGAACGCGTCGAGCTGCCGCCGCAGCCGCTCGCGGTGCTCAGCCCCGGCGCCACCGATCCGCGCCGGCGCTGGT
CGGTGGCGCGCTTTGCCGCGGTGGGCGACGCGCTGGTCGAGGCCGGGGCGGCGGTGGCGGTGCAGGGCGACGACAGCGAA
CGCGGCCTCACCGCGGCGGTGGTCGCCGCGATGCGCAGCCCCGCGCTCGACCTCGGCGGCCGCTTGTCGCTCGACGGGCT
GGCGGCCTTGCTCGCGCGTGCGCGCCTGCTGGTAGCCAACGACAGCGGCCCGCTGCACCTCGCGCAGGCGGTCGGCACCG
CCACCGTCGGCATCTACTGGCTGATCAACCTCTTCGTGTCCGGCCCGCCCACCGTCACCCGGCGGCGCTACGCGCTGTCG
CTGCGCCAGAGCTGCCCGGTCTGCGGACGCGACAACCGCCATCAGCGCTGCGAGCACGACGTCTCCTTCGTGGACGACGT
CGCGCTCGACGAGGTGCTTACGCCGGCGCTGGCGCTGTGGCAGCAGGAGGCGGCGCGGCCAGCAGCGCATGCGCCTCATC
CAGCACCGCGCTAA

Upstream 100 bases:

>100_bases
GCATCATCCCGTCGGGCGCGTTTCACCAGGAACTGCCGACGACGGTGGCGCGGCGCGAGGTGGATGCCCCGCGCGTGCTC
AACCTGGCGGAGGGCTGAAC

Downstream 100 bases:

>100_bases
GTCCGTCATCCGGGTGGTCGGGCGTCCATACCGCACGGTGCAGGCGACGGTCGAGCGGCGCCCAGCGCGCCATCTCGGTG
GCGCGGAACACCACCACGCT

Product: glycosyltransferase

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase; LPS Biosynthesis Related Glycosyltransferase; Glycosyl Transferase ADP-HeptoseLPS Heptosyltransferase; Heptosyltransferase Family Protein; ADP-Heptose-LPS Heptosyltransferase; ADP-Heptose; Heptosyltransferase

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MRPEGFVAARAAARPFGEVDEIAVLRPSGLGDFIFALPALEALRERYPHARITLLAKGWHRSFLKGRTRLVDEVVALPPI
PGVGAPPGHAADEAAIDACVEALRARAFDLAFQFHGGGRYSNPFLLRLGARHSFGLLAPGATPLPHCVPYELWQNERLRL
LEVAALADARPVELEPLLPVLPRDRRELGERVELPPQPLAVLSPGATDPRRRWSVARFAAVGDALVEAGAAVAVQGDDSE
RGLTAAVVAAMRSPALDLGGRLSLDGLAALLARARLLVANDSGPLHLAQAVGTATVGIYWLINLFVSGPPTVTRRRYALS
LRQSCPVCGRDNRHQRCEHDVSFVDDVALDEVLTPALALWQQEAARPAAHAPHPAPR

Sequences:

>Translated_377_residues
MRPEGFVAARAAARPFGEVDEIAVLRPSGLGDFIFALPALEALRERYPHARITLLAKGWHRSFLKGRTRLVDEVVALPPI
PGVGAPPGHAADEAAIDACVEALRARAFDLAFQFHGGGRYSNPFLLRLGARHSFGLLAPGATPLPHCVPYELWQNERLRL
LEVAALADARPVELEPLLPVLPRDRRELGERVELPPQPLAVLSPGATDPRRRWSVARFAAVGDALVEAGAAVAVQGDDSE
RGLTAAVVAAMRSPALDLGGRLSLDGLAALLARARLLVANDSGPLHLAQAVGTATVGIYWLINLFVSGPPTVTRRRYALS
LRQSCPVCGRDNRHQRCEHDVSFVDDVALDEVLTPALALWQQEAARPAAHAPHPAPR
>Mature_377_residues
MRPEGFVAARAAARPFGEVDEIAVLRPSGLGDFIFALPALEALRERYPHARITLLAKGWHRSFLKGRTRLVDEVVALPPI
PGVGAPPGHAADEAAIDACVEALRARAFDLAFQFHGGGRYSNPFLLRLGARHSFGLLAPGATPLPHCVPYELWQNERLRL
LEVAALADARPVELEPLLPVLPRDRRELGERVELPPQPLAVLSPGATDPRRRWSVARFAAVGDALVEAGAAVAVQGDDSE
RGLTAAVVAAMRSPALDLGGRLSLDGLAALLARARLLVANDSGPLHLAQAVGTATVGIYWLINLFVSGPPTVTRRRYALS
LRQSCPVCGRDNRHQRCEHDVSFVDDVALDEVLTPALALWQQEAARPAAHAPHPAPR

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 40549; Mature: 40549

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPEGFVAARAAARPFGEVDEIAVLRPSGLGDFIFALPALEALRERYPHARITLLAKGWH
CCCCCCCHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHH
RSFLKGRTRLVDEVVALPPIPGVGAPPGHAADEAAIDACVEALRARAFDLAFQFHGGGRY
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCC
SNPFLLRLGARHSFGLLAPGATPLPHCVPYELWQNERLRLLEVAALADARPVELEPLLPV
CCCEEEEECCCCCCCEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCC
LPRDRRELGERVELPPQPLAVLSPGATDPRRRWSVARFAAVGDALVEAGAAVAVQGDDSE
CCCHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
RGLTAAVVAAMRSPALDLGGRLSLDGLAALLARARLLVANDSGPLHLAQAVGTATVGIYW
CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHH
LINLFVSGPPTVTRRRYALSLRQSCPVCGRDNRHQRCEHDVSFVDDVALDEVLTPALALW
HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQEAARPAAHAPHPAPR
HHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRPEGFVAARAAARPFGEVDEIAVLRPSGLGDFIFALPALEALRERYPHARITLLAKGWH
CCCCCCCHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHH
RSFLKGRTRLVDEVVALPPIPGVGAPPGHAADEAAIDACVEALRARAFDLAFQFHGGGRY
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCC
SNPFLLRLGARHSFGLLAPGATPLPHCVPYELWQNERLRLLEVAALADARPVELEPLLPV
CCCEEEEECCCCCCCEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCC
LPRDRRELGERVELPPQPLAVLSPGATDPRRRWSVARFAAVGDALVEAGAAVAVQGDDSE
CCCHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
RGLTAAVVAAMRSPALDLGGRLSLDGLAALLARARLLVANDSGPLHLAQAVGTATVGIYW
CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHH
LINLFVSGPPTVTRRRYALSLRQSCPVCGRDNRHQRCEHDVSFVDDVALDEVLTPALALW
HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQEAARPAAHAPHPAPR
HHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA