| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is yyaM [H]
Identifier: 119897977
GI number: 119897977
Start: 1849657
End: 1850562
Strand: Reverse
Name: yyaM [H]
Synonym: azo1686
Alternate gene names: 119897977
Gene position: 1850562-1849657 (Counterclockwise)
Preceding gene: 119897978
Following gene: 119897976
Centisome position: 42.29
GC content: 68.98
Gene sequence:
>906_bases ATGACGCGCCTTTCCGCCCGGCTGTCCGCCCATCCCTACGTCCTGCTGACGCTCACTGCCCTGTTCTGGGCGGGCAACAT GGTGATGGGCCGCGGCATCCGCGCCGACGTGCCGCCGATCGCGCTCGCGTTCTGGCGGTGGACGATCGCGCTGGCGCTGG TGCTGCCCTTTGCCCTGCCCCACCTGCGCAGCCAGTGGCCTGCGCTGCGCCAGGCCTGGCGTCCGGTGCTGGCGCTCGGC GTGCTCGGCGTGGGCTGCTACAACACCTTCGCCTACCTCGCGCTGCAGCACACCACGGCCACCAACGCCACCCTGCTCAA CTCCTTCATCCCGATCGCGACCATCGCGCTTGCCTTCGTCCTGCTCGGCAAGCGCCTGTCCAGCCTGGAAGCGGCGGGCG TGCTGGTCTCGCTCGCCGGCGTCGTCACCATCGTCAGTCACGGCAGCCTCGACACCCTGCTCGGCCTGTCGCTCAACACC GGCGACCTGTGGATGCTCGGCGCCGTGCTGACCTGGGGCATCTACACGGTGGGCCTGCAGTGGCGGCCGCAAGGCGTCGA TCCGATGCTGATGCTCGCGGCCTTTACCGTGGTCGGGCTGGCGATGCTGGTGCCGCTGTACGCGTGGGAGCTTTCCGGCG GGCGCCATATCAACCCGTCGGTCGCCGGCATCGGCGGCATTCTGTATACCGGCATCTTCCCCGGCTTCCTGGGCTACATC TTCTACAACGCGGGGGTCGCGGCGGTCGGGCCCAGCCGCTCGTCGCTGTTCATCCACCTGATGCCGGTGTTCGGCACCCT GCTCGCGGCGCTCTTCCTCGGCGAGCGGCCCTACTGGTATCACTTTGTCGGCATCGGCCTGGTGTTTGCCGGCATTGTGC TGACCACGCGCAAGGCGGCGCGCTGA
Upstream 100 bases:
>100_bases GCTGCCGCGCCCTGAGCGGCCGTATCAGGGCATTGCCGGATGCCGCCACGGCGGCATCGCATGCCATCATCGTCCTTCCC TCGGCAACCGTTCCTCCCCG
Downstream 100 bases:
>100_bases CCATGCTGGAGAAGCTGGGCCGCTGGCTGACCGAGCGCTTCGGCAGGACGCCGCCCGAAGTCGCGGAAGCCGATTGGCAG CAGGCCGAAGCCGGCCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTRLSARLSAHPYVLLTLTALFWAGNMVMGRGIRADVPPIALAFWRWTIALALVLPFALPHLRSQWPALRQAWRPVLALG VLGVGCYNTFAYLALQHTTATNATLLNSFIPIATIALAFVLLGKRLSSLEAAGVLVSLAGVVTIVSHGSLDTLLGLSLNT GDLWMLGAVLTWGIYTVGLQWRPQGVDPMLMLAAFTVVGLAMLVPLYAWELSGGRHINPSVAGIGGILYTGIFPGFLGYI FYNAGVAAVGPSRSSLFIHLMPVFGTLLAALFLGERPYWYHFVGIGLVFAGIVLTTRKAAR
Sequences:
>Translated_301_residues MTRLSARLSAHPYVLLTLTALFWAGNMVMGRGIRADVPPIALAFWRWTIALALVLPFALPHLRSQWPALRQAWRPVLALG VLGVGCYNTFAYLALQHTTATNATLLNSFIPIATIALAFVLLGKRLSSLEAAGVLVSLAGVVTIVSHGSLDTLLGLSLNT GDLWMLGAVLTWGIYTVGLQWRPQGVDPMLMLAAFTVVGLAMLVPLYAWELSGGRHINPSVAGIGGILYTGIFPGFLGYI FYNAGVAAVGPSRSSLFIHLMPVFGTLLAALFLGERPYWYHFVGIGLVFAGIVLTTRKAAR >Mature_300_residues TRLSARLSAHPYVLLTLTALFWAGNMVMGRGIRADVPPIALAFWRWTIALALVLPFALPHLRSQWPALRQAWRPVLALGV LGVGCYNTFAYLALQHTTATNATLLNSFIPIATIALAFVLLGKRLSSLEAAGVLVSLAGVVTIVSHGSLDTLLGLSLNTG DLWMLGAVLTWGIYTVGLQWRPQGVDPMLMLAAFTVVGLAMLVPLYAWELSGGRHINPSVAGIGGILYTGIFPGFLGYIF YNAGVAAVGPSRSSLFIHLMPVFGTLLAALFLGERPYWYHFVGIGLVFAGIVLTTRKAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32329; Mature: 32198
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLSARLSAHPYVLLTLTALFWAGNMVMGRGIRADVPPIALAFWRWTIALALVLPFALP CCCCCCHHCCCCHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HLRSQWPALRQAWRPVLALGVLGVGCYNTFAYLALQHTTATNATLLNSFIPIATIALAFV HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LLGKRLSSLEAAGVLVSLAGVVTIVSHGSLDTLLGLSLNTGDLWMLGAVLTWGIYTVGLQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEE WRPQGVDPMLMLAAFTVVGLAMLVPLYAWELSGGRHINPSVAGIGGILYTGIFPGFLGYI ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FYNAGVAAVGPSRSSLFIHLMPVFGTLLAALFLGERPYWYHFVGIGLVFAGIVLTTRKAA HHHCCEEEECCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC R C >Mature Secondary Structure TRLSARLSAHPYVLLTLTALFWAGNMVMGRGIRADVPPIALAFWRWTIALALVLPFALP CCCCCHHCCCCHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HLRSQWPALRQAWRPVLALGVLGVGCYNTFAYLALQHTTATNATLLNSFIPIATIALAFV HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LLGKRLSSLEAAGVLVSLAGVVTIVSHGSLDTLLGLSLNTGDLWMLGAVLTWGIYTVGLQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEE WRPQGVDPMLMLAAFTVVGLAMLVPLYAWELSGGRHINPSVAGIGGILYTGIFPGFLGYI ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FYNAGVAAVGPSRSSLFIHLMPVFGTLLAALFLGERPYWYHFVGIGLVFAGIVLTTRKAA HHHCCEEEECCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]