Click here to switch to the map view.

The map label for this gene is selD [H]

Identifier: 119897956

GI number: 119897956

Start: 1828320

End: 1829360

Strand: Direct

Name: selD [H]

Synonym: azo1665

Alternate gene names: 119897956

Gene position: 1828320-1829360 (Clockwise)

Preceding gene: 119897954

Following gene: 119897958

Centisome position: 41.78

GC content: 70.89

Gene sequence:

>1041_bases
ATGGAAAAAATCCGGCTCACGCAATTTTCCCACGGCGGCGGATGCGGCTGCAAAATCGCGCCCGCGGTGCTCGCCGAAAT
GCTCTCCGGCATGCCGCCGGGCATCGTCCCGCCCGACCTGCTGGTCGGCACTGAAACCGCGGACGATGCCGCGGTCTACC
GGTTGAACGAGCGCCAGGCGGTGGTGGCCACCACCGACTTCTTCACCCCCATCGTCGACGATCCTTACGACTTCGGCCGC
ATCGCAGCGACCAACGCGCTGTCGGACGTCTATGCCATGGGCGGCACGCCGATCATGGCGCTGGCGGTGGTCGGCATGCC
GCTCGACAAGCTCCCGCGCGAGGTGATCGCGCGCGTGCTGGAAGGCGGGGCCGCGGTGTGCCGCGAGGCGGGCATTCCGA
TCGCGGGCGGTCATTCAATCGATGTGCTCGAACCGATCTACGGGCTGGTCGGCATCGGCGTGGTGGACCCCGCGCAGGTA
CGCACCAATGCCGGGGCCCGCGCCGGCGACGTGCTGCTCCTTACCAAACCGCTCGGCGTCGGCGTGCTCTCCGCGGGGCT
CAAGAAGGGCCTGCTGAGCGCGGAGGGCTACGCCGAAATGCTGCGCTGGACCACGACGCTGAACCGCGCCGGCGCCCGCC
TGGCGGCGGTGGAGGGCGTGCACGCGGTGACCGACGTGACCGGCTTCGGCCTTGCGGGGCACCTGCTGGAGATGTGCCGC
GGCGCCGGCCTCGCGGCCCGCCTGTCGTTCGATGCGCTGCCGCTGATCGAAGAGGCGGTGGGCCTCGTGCGCGACGGCGT
CGCCACCGGCGCCTCCGCCCGCAACTGGGCGAGCTACGGCGAGGACGTCGAGTTGCCGGCGGATTTCGAGGACTGGCAGC
GCAAGCTGCTGACCGATCCGCAGACCTCGGGCGGGCTGCTCGTCGCCTGTGCCCCCGAAGTGGTCGACGAAGTGCTGGCG
ACGGTGGCGGCGGTGCAGGGCAGTCCGGCCCGCGTCATCGGATGCATGGAGACGGGGCCGGCGCGGCTGCGACTGGGCTG
A

Upstream 100 bases:

>100_bases
GTCGATGATCTCGTCAAACTCGCCTCGCTGTGCTACGGTCGCAACGCCTTTCTGCATGGTTTCGGGTGCCGCGTCCTGCG
GCGCCACTCCTTTCTGGAAC

Downstream 100 bases:

>100_bases
GGCTGGGCTGAGGCCCTTCAGCCCTTGAGCATGTCGCGCAGGCCGCTGCGCCACAGGGTGTCGAGCATCAGCTGCTGCGC
GTCGGCGGCCGGGTGGATGC

Product: selenophosphate synthetase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MEKIRLTQFSHGGGCGCKIAPAVLAEMLSGMPPGIVPPDLLVGTETADDAAVYRLNERQAVVATTDFFTPIVDDPYDFGR
IAATNALSDVYAMGGTPIMALAVVGMPLDKLPREVIARVLEGGAAVCREAGIPIAGGHSIDVLEPIYGLVGIGVVDPAQV
RTNAGARAGDVLLLTKPLGVGVLSAGLKKGLLSAEGYAEMLRWTTTLNRAGARLAAVEGVHAVTDVTGFGLAGHLLEMCR
GAGLAARLSFDALPLIEEAVGLVRDGVATGASARNWASYGEDVELPADFEDWQRKLLTDPQTSGGLLVACAPEVVDEVLA
TVAAVQGSPARVIGCMETGPARLRLG

Sequences:

>Translated_346_residues
MEKIRLTQFSHGGGCGCKIAPAVLAEMLSGMPPGIVPPDLLVGTETADDAAVYRLNERQAVVATTDFFTPIVDDPYDFGR
IAATNALSDVYAMGGTPIMALAVVGMPLDKLPREVIARVLEGGAAVCREAGIPIAGGHSIDVLEPIYGLVGIGVVDPAQV
RTNAGARAGDVLLLTKPLGVGVLSAGLKKGLLSAEGYAEMLRWTTTLNRAGARLAAVEGVHAVTDVTGFGLAGHLLEMCR
GAGLAARLSFDALPLIEEAVGLVRDGVATGASARNWASYGEDVELPADFEDWQRKLLTDPQTSGGLLVACAPEVVDEVLA
TVAAVQGSPARVIGCMETGPARLRLG
>Mature_346_residues
MEKIRLTQFSHGGGCGCKIAPAVLAEMLSGMPPGIVPPDLLVGTETADDAAVYRLNERQAVVATTDFFTPIVDDPYDFGR
IAATNALSDVYAMGGTPIMALAVVGMPLDKLPREVIARVLEGGAAVCREAGIPIAGGHSIDVLEPIYGLVGIGVVDPAQV
RTNAGARAGDVLLLTKPLGVGVLSAGLKKGLLSAEGYAEMLRWTTTLNRAGARLAAVEGVHAVTDVTGFGLAGHLLEMCR
GAGLAARLSFDALPLIEEAVGLVRDGVATGASARNWASYGEDVELPADFEDWQRKLLTDPQTSGGLLVACAPEVVDEVLA
TVAAVQGSPARVIGCMETGPARLRLG

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=378, Percent_Identity=29.6296296296296, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI15011844, Length=390, Percent_Identity=29.2307692307692, Blast_Score=113, Evalue=3e-25,
Organism=Escherichia coli, GI1788062, Length=323, Percent_Identity=53.5603715170279, Blast_Score=333, Evalue=9e-93,
Organism=Caenorhabditis elegans, GI17543426, Length=355, Percent_Identity=29.8591549295775, Blast_Score=135, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24653602, Length=374, Percent_Identity=29.144385026738, Blast_Score=115, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24653604, Length=374, Percent_Identity=29.144385026738, Blast_Score=115, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 35717; Mature: 35717

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIRLTQFSHGGGCGCKIAPAVLAEMLSGMPPGIVPPDLLVGTETADDAAVYRLNERQA
CCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCEEEEECCCEE
VVATTDFFTPIVDDPYDFGRIAATNALSDVYAMGGTPIMALAVVGMPLDKLPREVIARVL
EEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHH
EGGAAVCREAGIPIAGGHSIDVLEPIYGLVGIGVVDPAQVRTNAGARAGDVLLLTKPLGV
HCCHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCH
GVLSAGLKKGLLSAEGYAEMLRWTTTLNRAGARLAAVEGVHAVTDVTGFGLAGHLLEMCR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHCCCHHHHHHHHHC
GAGLAARLSFDALPLIEEAVGLVRDGVATGASARNWASYGEDVELPADFEDWQRKLLTDP
CCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCC
QTSGGLLVACAPEVVDEVLATVAAVQGSPARVIGCMETGPARLRLG
CCCCCEEEEECHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECC
>Mature Secondary Structure
MEKIRLTQFSHGGGCGCKIAPAVLAEMLSGMPPGIVPPDLLVGTETADDAAVYRLNERQA
CCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCEEEEECCCEE
VVATTDFFTPIVDDPYDFGRIAATNALSDVYAMGGTPIMALAVVGMPLDKLPREVIARVL
EEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHH
EGGAAVCREAGIPIAGGHSIDVLEPIYGLVGIGVVDPAQVRTNAGARAGDVLLLTKPLGV
HCCHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCH
GVLSAGLKKGLLSAEGYAEMLRWTTTLNRAGARLAAVEGVHAVTDVTGFGLAGHLLEMCR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHCCCHHHHHHHHHC
GAGLAARLSFDALPLIEEAVGLVRDGVATGASARNWASYGEDVELPADFEDWQRKLLTDP
CCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCC
QTSGGLLVACAPEVVDEVLATVAAVQGSPARVIGCMETGPARLRLG
CCCCCEEEEECHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11826967 [H]