| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is yecA [H]
Identifier: 119897815
GI number: 119897815
Start: 1669231
End: 1669941
Strand: Direct
Name: yecA [H]
Synonym: azo1524
Alternate gene names: 119897815
Gene position: 1669231-1669941 (Clockwise)
Preceding gene: 119897814
Following gene: 119897816
Centisome position: 38.14
GC content: 68.35
Gene sequence:
>711_bases ATGAGTACCGCTGCAGACCAAGCTCACCTGATGAGCGATGAAGACTTCGAAGCGCTGGAGGAAATGCTGACCTCGGACAT GGTGCCGGAGGACTGCATGGACCTGGAGATGCTGGACGGCTTTCTCGCCGGCGTGCTCGCCAGCCCGGTGCCGATTGCCA CCGCGAACTGGCTGCCGGCGGTGTGGTCGGCGCATGCCGACGAGATCAGCTTCGGCTCCGGCAGCGGCGCGCAGCGCGCC ATCCGGCTGGTGCTGTCCTACTACAACGAGCTGGTCACCACGATCGGCGACGAAGAGGAGGGCTGGGAGCCGTTCTGCTT CGCGATCGCCGAGGGCGACAGCCTGAAGCTGGCCGAGGAGTGGATGGCCGGCTTCGCCCAGGGGCTGGAACTGTGGCCGC AGGATTGGGAAAAGACGCTGCCGGCGGCCGAGGCGGAAGCGCTGCGGGCGGAACTCGACGCCATCCTTGCGCCGTGGGGC GCAGACGAGGCTGCGGCCGCTAGTGACGAAGAGCGGCTGCGCTGGCTGGAAGAGGCGGGCGAGCGCGTCTCCGACATCGT CGCCCACTGGCGCGAGCTGGAGCTGGCGATGCCGACGCCCGTGGCGGTGGAGCTGCCGTCGCAGCCCAAGCCTGCCGGCC CGGGTCGCAACGAACCCTGTCCCTGCGGCAGCGGGAAAAAGTACAAGAAGTGCCACGGCGCCGATGCGTGA
Upstream 100 bases:
>100_bases CGCCGCTGACGCCCTTCGAGCGCAAGTACCGCGACTCCGGCCAAGCGCTGTATCGCTGCGTCGTCGAGCTGGGGGATGAA CCCGTTTCTGGAGAATCCCG
Downstream 100 bases:
>100_bases GGATCATTGCACCCGCTGCGGCGCCTGCTGCGCGGCCTTCCGCGTCGATTTTCACTGTGCGGAACTCGTCGGCGGCGGCA TGAGCCTGGGCGCCGAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MSTAADQAHLMSDEDFEALEEMLTSDMVPEDCMDLEMLDGFLAGVLASPVPIATANWLPAVWSAHADEISFGSGSGAQRA IRLVLSYYNELVTTIGDEEEGWEPFCFAIAEGDSLKLAEEWMAGFAQGLELWPQDWEKTLPAAEAEALRAELDAILAPWG ADEAAAASDEERLRWLEEAGERVSDIVAHWRELELAMPTPVAVELPSQPKPAGPGRNEPCPCGSGKKYKKCHGADA
Sequences:
>Translated_236_residues MSTAADQAHLMSDEDFEALEEMLTSDMVPEDCMDLEMLDGFLAGVLASPVPIATANWLPAVWSAHADEISFGSGSGAQRA IRLVLSYYNELVTTIGDEEEGWEPFCFAIAEGDSLKLAEEWMAGFAQGLELWPQDWEKTLPAAEAEALRAELDAILAPWG ADEAAAASDEERLRWLEEAGERVSDIVAHWRELELAMPTPVAVELPSQPKPAGPGRNEPCPCGSGKKYKKCHGADA >Mature_235_residues STAADQAHLMSDEDFEALEEMLTSDMVPEDCMDLEMLDGFLAGVLASPVPIATANWLPAVWSAHADEISFGSGSGAQRAI RLVLSYYNELVTTIGDEEEGWEPFCFAIAEGDSLKLAEEWMAGFAQGLELWPQDWEKTLPAAEAEALRAELDAILAPWGA DEAAAASDEERLRWLEEAGERVSDIVAHWRELELAMPTPVAVELPSQPKPAGPGRNEPCPCGSGKKYKKCHGADA
Specific function: Unknown
COG id: COG3318
COG function: function code R; Predicted metal-binding protein related to the C-terminal domain of SecA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788219, Length=226, Percent_Identity=31.4159292035398, Blast_Score=93, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR011978 [H]
Pfam domain/function: PF02810 SEC-C; PF03695 UPF0149 [H]
EC number: NA
Molecular weight: Translated: 25605; Mature: 25474
Theoretical pI: Translated: 3.89; Mature: 3.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAADQAHLMSDEDFEALEEMLTSDMVPEDCMDLEMLDGFLAGVLASPVPIATANWLPA CCCCCCHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH VWSAHADEISFGSGSGAQRAIRLVLSYYNELVTTIGDEEEGWEPFCFAIAEGDSLKLAEE HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHH WMAGFAQGLELWPQDWEKTLPAAEAEALRAELDAILAPWGADEAAAASDEERLRWLEEAG HHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHH ERVSDIVAHWRELELAMPTPVAVELPSQPKPAGPGRNEPCPCGSGKKYKKCHGADA HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure STAADQAHLMSDEDFEALEEMLTSDMVPEDCMDLEMLDGFLAGVLASPVPIATANWLPA CCCCCHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH VWSAHADEISFGSGSGAQRAIRLVLSYYNELVTTIGDEEEGWEPFCFAIAEGDSLKLAEE HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHH WMAGFAQGLELWPQDWEKTLPAAEAEALRAELDAILAPWGADEAAAASDEERLRWLEEAG HHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHH ERVSDIVAHWRELELAMPTPVAVELPSQPKPAGPGRNEPCPCGSGKKYKKCHGADA HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 3002500 [H]