Click here to switch to the map view.

The map label for this gene is ygiQ [C]

Identifier: 119897798

GI number: 119897798

Start: 1649253

End: 1651382

Strand: Direct

Name: ygiQ [C]

Synonym: azo1507

Alternate gene names: 119897798

Gene position: 1649253-1651382 (Clockwise)

Preceding gene: 119897793

Following gene: 119897800

Centisome position: 37.69

GC content: 69.34

Gene sequence:

>2130_bases
ATGTCGCGCGCCGAGATGGACACGCTGGGCTGGGATGCCTGCGACGTCGTGCTGGTGACCGGCGACGCCTATATCGACCA
CCCAAGCTTCGGCATGGCCCTGGTCGGCCGCCTGCTCGAAGCCCACGGCTTTCGCGTCGGCATCATCAGCCAGCCCGACT
GGCATTCGGCGGAGCCCTTCCGCGCGCTCGGCAAGCCGCGGCTGTACTTCGGCATCACCGCCGGCAACATGGATTCGATG
GTCAATCGCTACACCTCCGACCGCAAGATCCGCTCCGACGACGCCTACACGCCCAACGCCGAGGCCAACAAGCGGCCGGA
CCGCGCGCTCACGGTCTACGCCCAGCGCGCCCGCGAAGCCTATCCCGACGCCAATGTGGTGATCGGCAGCATCGAGGCCT
CGCTGCGCCGTATCGCCCACTACGACTACTGGTCGGACAAGGTGCGGCGTTCGGTGCTGCCCGATTCCAAGGCCGACATC
CTGCTGTTCGGCAATGCCGAGCGCGCGCTGGTGGCGCTGACCCAGCGGCTGGCGGCGGGCGAACCGATCGAGTCCATCCG
CGACCTGCGCGGCACCGCCTTCATGGCCAGGCCGGGCTGGCGGCCGGAAGGCTGGGTGGAGATCGATTCGCTCGCGCTCG
ACAAGCCGGGCCGCATCGACAGCCATGCCGACCCCTACGCGATGGAACCGCAAGGCAGTGCGCTGCAGCCCGCGGCTGAT
GGCGCCCAGCCGGTGCGTATCGTGCCGGCGGCCGAGCGGGTCGCCGCCCGCCGCGCCGCGCGCGAGCACACCGTGGTGCG
GCTGCCGGCCTACGAGGCGGTCAAGGACGACGCGGTGCTGTACGCCCACGCCTCGCGCGTGTTCCACCTCGAATCCAACC
CCGGCAACGCGCGTGCGCTGGTACAGCGCCACGGCGAGGGGCCGGGCGCGCGCGAGGTCTGGCTGAACCCGCCGCCGGTT
CCGCTCTCCACGCCGGAGATGGACTTCGTCTACGGCCTGCCCTATGCGCGCCAGCCGCATCCGGCCTACAAGGGCGCGCG
CATTCCGGCCTGGGACATGATCAAGTTCTCGGTGAACATCATGCGCGGCTGCTTCGGCGGCTGTACCTTCTGCTCGATCA
CCGAGCACGAGGGCCGCATCATCCAGAGCCGCTCGGAACAATCCATCCTGCGCGAGATCGAGGAGATCCGCGACAAGTCG
CCGGACTTCAAGGGCCACATCTCCGACCTCGGCGGCCCCACCGCCAACATGTACCGGATGGCGTGCAAGGACCCGAAGAT
CGAGCAGTCCTGTCGTCGGCTGTCCTGCGTCTATCCCGGCATCTGCGAAAACCTCGGCACCGACCACGGTCCGCTGATCC
AGATCTACCGCAAGGCGCGCGCGCTGCCCGGCATCAAGCGCATCACCATCGGCTCCGGCCTGCGTTACGACCTCGCGGTG
CGCTCGCCGGAGTACGTGAAGGAACTGGTGACCCACCACGTCAGCGGCCTGTTGAAGATCGCGCCCGAGCATAGCGAGGA
AGGCCCGCTCTCCAAGATGATGAAGCCGGGCATGGGTGCCTACGAAGCCTTCCGCAAGCTGTTCGAGAAGTACTCGAAGG
AAGCCGGCAAGAAGCAGCATCTGGTGCCCTACTTCATCGCCGCCCACCCCGGCACCACCGACGAGGACATGCTCAACCTG
GCGCTGTGGCTGAAGGCCAACGACTTCCGGCTGGATCAGGTGCAGACCTTCCTGCCGACGCCGATGGCGCTGGCGACCGC
GATGTACCACAGCCGCAAGAATCCGCTGAAGAAGGTGAGCGCGGAGTCCGAAGCGGTGGACACCGTGCGCACCGGCAAGC
TGCGCCGCCTGCACAAGGCCTTCCTGCGCTGGCACGACCCGGAGAACTGGCCGATCCTGCGCGAGGCGCTGCTGCGCATG
GGGCGCGCGGATCTGATCGGCAACGGCCCCAACTGTCTGGTGCCGCGCCATCAGCCGGCGGGGGTGGTTTCGCCCGTCCG
CCGTCCCGAGCAGCAGGCGCGAACGGGCGCAGGTGCGGCAGCGCGTGACGGACGACGGGCCCCGGGGCGTCCGGCGGGCC
CCTCCGGGGCGGCGCGGGGCGCGCGGCCGGCGCCGCGCCGCCCGCGCTGA

Upstream 100 bases:

>100_bases
TTGGGCGCTACCGCGGGCTACAATGGCGGGCATCATGAATGCAGTTCCCTCGATTCTGCCGGCCGGAGTTCCGTCGCGCC
GGCCCGCTCCCTTTCTACCG

Downstream 100 bases:

>100_bases
AGCGACCCTCAGAACAGCGGCAGCCGATCTGCCCGGTAGCGTGGCCGCGGCGTGAAGCCGGCGGTCAGCAGCGAGGGCAT
CATCACCTTGCCGGCACGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 709; Mature: 708

Protein sequence:

>709_residues
MSRAEMDTLGWDACDVVLVTGDAYIDHPSFGMALVGRLLEAHGFRVGIISQPDWHSAEPFRALGKPRLYFGITAGNMDSM
VNRYTSDRKIRSDDAYTPNAEANKRPDRALTVYAQRAREAYPDANVVIGSIEASLRRIAHYDYWSDKVRRSVLPDSKADI
LLFGNAERALVALTQRLAAGEPIESIRDLRGTAFMARPGWRPEGWVEIDSLALDKPGRIDSHADPYAMEPQGSALQPAAD
GAQPVRIVPAAERVAARRAAREHTVVRLPAYEAVKDDAVLYAHASRVFHLESNPGNARALVQRHGEGPGAREVWLNPPPV
PLSTPEMDFVYGLPYARQPHPAYKGARIPAWDMIKFSVNIMRGCFGGCTFCSITEHEGRIIQSRSEQSILREIEEIRDKS
PDFKGHISDLGGPTANMYRMACKDPKIEQSCRRLSCVYPGICENLGTDHGPLIQIYRKARALPGIKRITIGSGLRYDLAV
RSPEYVKELVTHHVSGLLKIAPEHSEEGPLSKMMKPGMGAYEAFRKLFEKYSKEAGKKQHLVPYFIAAHPGTTDEDMLNL
ALWLKANDFRLDQVQTFLPTPMALATAMYHSRKNPLKKVSAESEAVDTVRTGKLRRLHKAFLRWHDPENWPILREALLRM
GRADLIGNGPNCLVPRHQPAGVVSPVRRPEQQARTGAGAAARDGRRAPGRPAGPSGAARGARPAPRRPR

Sequences:

>Translated_709_residues
MSRAEMDTLGWDACDVVLVTGDAYIDHPSFGMALVGRLLEAHGFRVGIISQPDWHSAEPFRALGKPRLYFGITAGNMDSM
VNRYTSDRKIRSDDAYTPNAEANKRPDRALTVYAQRAREAYPDANVVIGSIEASLRRIAHYDYWSDKVRRSVLPDSKADI
LLFGNAERALVALTQRLAAGEPIESIRDLRGTAFMARPGWRPEGWVEIDSLALDKPGRIDSHADPYAMEPQGSALQPAAD
GAQPVRIVPAAERVAARRAAREHTVVRLPAYEAVKDDAVLYAHASRVFHLESNPGNARALVQRHGEGPGAREVWLNPPPV
PLSTPEMDFVYGLPYARQPHPAYKGARIPAWDMIKFSVNIMRGCFGGCTFCSITEHEGRIIQSRSEQSILREIEEIRDKS
PDFKGHISDLGGPTANMYRMACKDPKIEQSCRRLSCVYPGICENLGTDHGPLIQIYRKARALPGIKRITIGSGLRYDLAV
RSPEYVKELVTHHVSGLLKIAPEHSEEGPLSKMMKPGMGAYEAFRKLFEKYSKEAGKKQHLVPYFIAAHPGTTDEDMLNL
ALWLKANDFRLDQVQTFLPTPMALATAMYHSRKNPLKKVSAESEAVDTVRTGKLRRLHKAFLRWHDPENWPILREALLRM
GRADLIGNGPNCLVPRHQPAGVVSPVRRPEQQARTGAGAAARDGRRAPGRPAGPSGAARGARPAPRRPR
>Mature_708_residues
SRAEMDTLGWDACDVVLVTGDAYIDHPSFGMALVGRLLEAHGFRVGIISQPDWHSAEPFRALGKPRLYFGITAGNMDSMV
NRYTSDRKIRSDDAYTPNAEANKRPDRALTVYAQRAREAYPDANVVIGSIEASLRRIAHYDYWSDKVRRSVLPDSKADIL
LFGNAERALVALTQRLAAGEPIESIRDLRGTAFMARPGWRPEGWVEIDSLALDKPGRIDSHADPYAMEPQGSALQPAADG
AQPVRIVPAAERVAARRAAREHTVVRLPAYEAVKDDAVLYAHASRVFHLESNPGNARALVQRHGEGPGAREVWLNPPPVP
LSTPEMDFVYGLPYARQPHPAYKGARIPAWDMIKFSVNIMRGCFGGCTFCSITEHEGRIIQSRSEQSILREIEEIRDKSP
DFKGHISDLGGPTANMYRMACKDPKIEQSCRRLSCVYPGICENLGTDHGPLIQIYRKARALPGIKRITIGSGLRYDLAVR
SPEYVKELVTHHVSGLLKIAPEHSEEGPLSKMMKPGMGAYEAFRKLFEKYSKEAGKKQHLVPYFIAAHPGTTDEDMLNLA
LWLKANDFRLDQVQTFLPTPMALATAMYHSRKNPLKKVSAESEAVDTVRTGKLRRLHKAFLRWHDPENWPILREALLRMG
RADLIGNGPNCLVPRHQPAGVVSPVRRPEQQARTGAGAAARDGRRAPGRPAGPSGAARGARPAPRRPR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=675, Percent_Identity=61.9259259259259, Blast_Score=868, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 78643; Mature: 78512

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAEMDTLGWDACDVVLVTGDAYIDHPSFGMALVGRLLEAHGFRVGIISQPDWHSAEPF
CCCCCCCCCCCCCEEEEEEECCCEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCHH
RALGKPRLYFGITAGNMDSMVNRYTSDRKIRSDDAYTPNAEANKRPDRALTVYAQRAREA
HHHCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
YPDANVVIGSIEASLRRIAHYDYWSDKVRRSVLPDSKADILLFGNAERALVALTQRLAAG
CCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCC
EPIESIRDLRGTAFMARPGWRPEGWVEIDSLALDKPGRIDSHADPYAMEPQGSALQPAAD
CCHHHHHHHCCCEEEECCCCCCCCCEEECCEECCCCCCCCCCCCCCEECCCCCCCCCCCC
GAQPVRIVPAAERVAARRAAREHTVVRLPAYEAVKDDAVLYAHASRVFHLESNPGNARAL
CCCCEEEECHHHHHHHHHHHHHCCEEECCCHHHHCCCEEEEEECCEEEEEECCCCHHHHH
VQRHGEGPGAREVWLNPPPVPLSTPEMDFVYGLPYARQPHPAYKGARIPAWDMIKFSVNI
HHHCCCCCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
MRGCFGGCTFCSITEHEGRIIQSRSEQSILREIEEIRDKSPDFKGHISDLGGPTANMYRM
HHHHCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH
ACKDPKIEQSCRRLSCVYPGICENLGTDHGPLIQIYRKARALPGIKRITIGSGLRYDLAV
HCCCCCHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEEEE
RSPEYVKELVTHHVSGLLKIAPEHSEEGPLSKMMKPGMGAYEAFRKLFEKYSKEAGKKQH
CCHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
LVPYFIAAHPGTTDEDMLNLALWLKANDFRLDQVQTFLPTPMALATAMYHSRKNPLKKVS
CCEEEEEECCCCCHHHHEEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHC
AESEAVDTVRTGKLRRLHKAFLRWHDPENWPILREALLRMGRADLIGNGPNCLVPRHQPA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCC
GVVSPVRRPEQQARTGAGAAARDGRRAPGRPAGPSGAARGARPAPRRPR
CCCCHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRAEMDTLGWDACDVVLVTGDAYIDHPSFGMALVGRLLEAHGFRVGIISQPDWHSAEPF
CCCCCCCCCCCCEEEEEEECCCEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCHH
RALGKPRLYFGITAGNMDSMVNRYTSDRKIRSDDAYTPNAEANKRPDRALTVYAQRAREA
HHHCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
YPDANVVIGSIEASLRRIAHYDYWSDKVRRSVLPDSKADILLFGNAERALVALTQRLAAG
CCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCC
EPIESIRDLRGTAFMARPGWRPEGWVEIDSLALDKPGRIDSHADPYAMEPQGSALQPAAD
CCHHHHHHHCCCEEEECCCCCCCCCEEECCEECCCCCCCCCCCCCCEECCCCCCCCCCCC
GAQPVRIVPAAERVAARRAAREHTVVRLPAYEAVKDDAVLYAHASRVFHLESNPGNARAL
CCCCEEEECHHHHHHHHHHHHHCCEEECCCHHHHCCCEEEEEECCEEEEEECCCCHHHHH
VQRHGEGPGAREVWLNPPPVPLSTPEMDFVYGLPYARQPHPAYKGARIPAWDMIKFSVNI
HHHCCCCCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
MRGCFGGCTFCSITEHEGRIIQSRSEQSILREIEEIRDKSPDFKGHISDLGGPTANMYRM
HHHHCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH
ACKDPKIEQSCRRLSCVYPGICENLGTDHGPLIQIYRKARALPGIKRITIGSGLRYDLAV
HCCCCCHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEEEE
RSPEYVKELVTHHVSGLLKIAPEHSEEGPLSKMMKPGMGAYEAFRKLFEKYSKEAGKKQH
CCHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
LVPYFIAAHPGTTDEDMLNLALWLKANDFRLDQVQTFLPTPMALATAMYHSRKNPLKKVS
CCEEEEEECCCCCHHHHEEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHC
AESEAVDTVRTGKLRRLHKAFLRWHDPENWPILREALLRMGRADLIGNGPNCLVPRHQPA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCC
GVVSPVRRPEQQARTGAGAAARDGRRAPGRPAGPSGAARGARPAPRRPR
CCCCHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]